Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91781750

Identifier: 91781750

GI number: 91781750

Start: 404763

End: 406547

Strand: Reverse

Name: 91781750

Synonym: Bxe_A4095

Alternate gene names: NA

Gene position: 406547-404763 (Counterclockwise)

Preceding gene: 91781751

Following gene: 91781749

Centisome position: 8.3

GC content: 61.46

Gene sequence:

>1785_bases
ATGGCGAATATCAGTCAACCCAAAGTGGACGCGGTAGTCGTTGGCATGGGCTGGTCCGGCTCGATCATGGCGATCGAACT
GGCGGACGCCGGCCTTACCGTGGTCGGCCTCGAGCGCGGCGAGAACCGCGACACCTATCCTGACTTCGCGTATCCGAAGA
TCGCTGACGAACTGACCTACGTGCAGCGTTACAAGCTGATGCAAAGCCTCGCGCACGAGACCGTGACGATCCGCCGCCAG
GCGAACGAGGTCGCGTTGCCGCTGCGCCAGTACGGCGCATTTCTGTTCGGCGACGGCGTGGGCGGCTCGGGCGTGCATTG
GAACGGCTTCACCTATCGCGCAACCGACGCCGACCTGAAACTGCGCAGCCATTACGAGCAACGCTACGGCAAGCAGTTCA
TTCCCGACGACATGACGATTCAGGACTGGCCGGTCAGCGCGGCCGAGCTCGAACCGTTCTACGACCGCTTCGAGTACGTC
GCGGGCACCTCGGGCAGGGCGGGCAACCTCAATGGCCGGCCAATCAGCGGCGGTAACCCGTTCGAGGCGCCACGCTCGCG
CGACTACGCGTTGCCGCCGTTGCCCACCGCGTATCCGTCGATGCTGTTCGAGCAGGCCGCGCGTGAAGTCGGCTATCACC
CGTATCCAACGCCCGCGTCGATTGCATCCAAAGCCTATAAGAACCCATATGGCATGCAGTTAGGGCCGTGCAACTTCTGC
GGCTATTGCGAGCTGTTCGGCTGCTACATGTTTTCGAAAGCGTCGCCGCAAACGTGCATTCTTCCGGCGCTCGCGAGAAA
GCCCAATTTCGAATTGCGCGAGCGCTCGGCGGTCATCAAGGTCAATCTCGACCCGACCGGCAAGCGCGCAACCGGCGTCA
CCTACATCGACGCGCAGGGACGCACGGTCGAGCAGCCGGCGGATATCGTCGCGCTCTGTGCTTACCAGATGCACAACGTG
CGCCTGCTCCTGCTATCGGGTATCGGCAAGCCGTACGATCCCGCTACCGGCGAAGGCACCGTCGGCAAAAACTACGCTTA
TCAGAAGAACAGCAAGATTCCCGTCTTCTTCGACAAGGACGTCGCGATCAATCCGTTCATCGGTTCGGGATCGGGCGGTG
TGGTCTATGACGATTTCAATGCGGACAACTTCGATCACGGTCCGGTGAATTTCATTGGCGGTGCGATCACGTTTGCAACC
GTAACGGGCGGCCGCCCGATTGCGCAGGCGCTGGTGCCGCCCGGCACGCCGAAGTGGGGATCAGGCTGGAAGAAGGCAGT
GAAGGATCACTATCTGCATTCGTTCGCCATCTCCACGCAAGGCTCCGTGATGTCGTACCGCGACAACTACCTCGATCTCG
ATCCGACCTACAAGGATGCGTACGGGCTGCCGTTATTGCGCATGACCTTCGACTGGAAAGACAACGAGGGCCGCATGACG
CAGTTCGTCAGCCACAAGGCCGCCGAAGTCGCGCGCGCGATGAACCCGAAGCCGGCATCGGTTGCCATCAATGCGGGCAA
GCCGGGCGATCACTTCGACGTCGGCCCGTATCAGAGCACGCATACGACCGGCGGCGCGATCGCGGGCGACCGGCCGGATA
ACAGCGTGGTCAACAAATATCTCCAGTCCTGGGATGTTCCGAACGTATTCGTGGCGGGCGCCTGTTCATTTCCGCAAAAT
CTCGGCATCAATCCGACCGGCACGATCGGCGCAATGACGTACTACGCGGCGAAAGCGATTCGCGAGACCTATCTGAAGAA
TCCCGGCCCGCTGGTCGAGGCATGA

Upstream 100 bases:

>100_bases
CCCGCTCGGTCCCGCGACGATAGAAGGCAAAACATAGCGTGATCCTTATCTAACCGGTTTCAGCGCAGCACCACATAAAA
CACACGCCAGGAGGAGACAC

Downstream 100 bases:

>100_bases
GCGGCCATCATGAACATGATTCCCGACCGCTTGAAGCAATACCTGATACCCGTGTTTGCGCTGATCTGCAGCGGCACGCC
CGGCGCTGCGAACGCGCAGG

Product: putative gluconate dehydrogenase

Products: NA

Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MANISQPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKIADELTYVQRYKLMQSLAHETVTIRRQ
ANEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATDADLKLRSHYEQRYGKQFIPDDMTIQDWPVSAAELEPFYDRFEYV
AGTSGRAGNLNGRPISGGNPFEAPRSRDYALPPLPTAYPSMLFEQAAREVGYHPYPTPASIASKAYKNPYGMQLGPCNFC
GYCELFGCYMFSKASPQTCILPALARKPNFELRERSAVIKVNLDPTGKRATGVTYIDAQGRTVEQPADIVALCAYQMHNV
RLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIPVFFDKDVAINPFIGSGSGGVVYDDFNADNFDHGPVNFIGGAITFAT
VTGGRPIAQALVPPGTPKWGSGWKKAVKDHYLHSFAISTQGSVMSYRDNYLDLDPTYKDAYGLPLLRMTFDWKDNEGRMT
QFVSHKAAEVARAMNPKPASVAINAGKPGDHFDVGPYQSTHTTGGAIAGDRPDNSVVNKYLQSWDVPNVFVAGACSFPQN
LGINPTGTIGAMTYYAAKAIRETYLKNPGPLVEA

Sequences:

>Translated_594_residues
MANISQPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKIADELTYVQRYKLMQSLAHETVTIRRQ
ANEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATDADLKLRSHYEQRYGKQFIPDDMTIQDWPVSAAELEPFYDRFEYV
AGTSGRAGNLNGRPISGGNPFEAPRSRDYALPPLPTAYPSMLFEQAAREVGYHPYPTPASIASKAYKNPYGMQLGPCNFC
GYCELFGCYMFSKASPQTCILPALARKPNFELRERSAVIKVNLDPTGKRATGVTYIDAQGRTVEQPADIVALCAYQMHNV
RLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIPVFFDKDVAINPFIGSGSGGVVYDDFNADNFDHGPVNFIGGAITFAT
VTGGRPIAQALVPPGTPKWGSGWKKAVKDHYLHSFAISTQGSVMSYRDNYLDLDPTYKDAYGLPLLRMTFDWKDNEGRMT
QFVSHKAAEVARAMNPKPASVAINAGKPGDHFDVGPYQSTHTTGGAIAGDRPDNSVVNKYLQSWDVPNVFVAGACSFPQN
LGINPTGTIGAMTYYAAKAIRETYLKNPGPLVEA
>Mature_593_residues
ANISQPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKIADELTYVQRYKLMQSLAHETVTIRRQA
NEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATDADLKLRSHYEQRYGKQFIPDDMTIQDWPVSAAELEPFYDRFEYVA
GTSGRAGNLNGRPISGGNPFEAPRSRDYALPPLPTAYPSMLFEQAAREVGYHPYPTPASIASKAYKNPYGMQLGPCNFCG
YCELFGCYMFSKASPQTCILPALARKPNFELRERSAVIKVNLDPTGKRATGVTYIDAQGRTVEQPADIVALCAYQMHNVR
LLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIPVFFDKDVAINPFIGSGSGGVVYDDFNADNFDHGPVNFIGGAITFATV
TGGRPIAQALVPPGTPKWGSGWKKAVKDHYLHSFAISTQGSVMSYRDNYLDLDPTYKDAYGLPLLRMTFDWKDNEGRMTQ
FVSHKAAEVARAMNPKPASVAINAGKPGDHFDVGPYQSTHTTGGAIAGDRPDNSVVNKYLQSWDVPNVFVAGACSFPQNL
GINPTGTIGAMTYYAAKAIRETYLKNPGPLVEA

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 64796; Mature: 64665

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANISQPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKIADELTY
CCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
VQRYKLMQSLAHETVTIRRQANEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATDADLK
HHHHHHHHHHHHHHEEEEECCCHHCCCHHHCCCEEEECCCCCCCEEECCEEEEECCCCHH
LRSHYEQRYGKQFIPDDMTIQDWPVSAAELEPFYDRFEYVAGTSGRAGNLNGRPISGGNP
HHHHHHHHHCCCCCCCCCEECCCCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
FEAPRSRDYALPPLPTAYPSMLFEQAAREVGYHPYPTPASIASKAYKNPYGMQLGPCNFC
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECCCCCC
GYCELFGCYMFSKASPQTCILPALARKPNFELRERSAVIKVNLDPTGKRATGVTYIDAQG
CHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCEECCCEEEEEECCCCCCCCCCEEEECCCC
RTVEQPADIVALCAYQMHNVRLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIPVFFDKD
CCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCC
VAINPFIGSGSGGVVYDDFNADNFDHGPVNFIGGAITFATVTGGRPIAQALVPPGTPKWG
CEECCEECCCCCCEEEECCCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHCCCCCCCCCC
SGWKKAVKDHYLHSFAISTQGSVMSYRDNYLDLDPTYKDAYGLPLLRMTFDWKDNEGRMT
CHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCHHCCCEEEEEEEEEECCCCHHH
QFVSHKAAEVARAMNPKPASVAINAGKPGDHFDVGPYQSTHTTGGAIAGDRPDNSVVNKY
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LQSWDVPNVFVAGACSFPQNLGINPTGTIGAMTYYAAKAIRETYLKNPGPLVEA
HHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ANISQPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKIADELTY
CCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
VQRYKLMQSLAHETVTIRRQANEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATDADLK
HHHHHHHHHHHHHHEEEEECCCHHCCCHHHCCCEEEECCCCCCCEEECCEEEEECCCCHH
LRSHYEQRYGKQFIPDDMTIQDWPVSAAELEPFYDRFEYVAGTSGRAGNLNGRPISGGNP
HHHHHHHHHCCCCCCCCCEECCCCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
FEAPRSRDYALPPLPTAYPSMLFEQAAREVGYHPYPTPASIASKAYKNPYGMQLGPCNFC
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECCCCCC
GYCELFGCYMFSKASPQTCILPALARKPNFELRERSAVIKVNLDPTGKRATGVTYIDAQG
CHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCEECCCEEEEEECCCCCCCCCCEEEECCCC
RTVEQPADIVALCAYQMHNVRLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIPVFFDKD
CCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCC
VAINPFIGSGSGGVVYDDFNADNFDHGPVNFIGGAITFATVTGGRPIAQALVPPGTPKWG
CEECCEECCCCCCEEEECCCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHCCCCCCCCCC
SGWKKAVKDHYLHSFAISTQGSVMSYRDNYLDLDPTYKDAYGLPLLRMTFDWKDNEGRMT
CHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCHHCCCEEEEEEEEEECCCCHHH
QFVSHKAAEVARAMNPKPASVAINAGKPGDHFDVGPYQSTHTTGGAIAGDRPDNSVVNKY
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LQSWDVPNVFVAGACSFPQNLGINPTGTIGAMTYYAAKAIRETYLKNPGPLVEA
HHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]