| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is nagA [H]
Identifier: 91781691
GI number: 91781691
Start: 340510
End: 341613
Strand: Direct
Name: nagA [H]
Synonym: Bxe_A4155
Alternate gene names: 91781691
Gene position: 340510-341613 (Clockwise)
Preceding gene: 91781690
Following gene: 91781692
Centisome position: 6.96
GC content: 66.67
Gene sequence:
>1104_bases ATGCTGACCGGAAACATACTCACCACCGATGGGTGGATTCACGGCACGCTCGAATACGAAAACGGCCGCATCACGGCGCT CGCCGGCGACCGCGTCGATCCGTCGACCAACGACGCGCCGTACATCCTGCCCGGCTTCATCGATCTGCACGTGCATGGCG GCGGCGGCGCCGACGTGATGGAAGGCGACCGCGCGATCGAAACCATCACCCGCACGCATGCGCGCTACGGCACGACAAGC CTGCTCGCCACCACCATGACCGCGCCGCGCGACGAATTGATGAGCGTCGTTGCGGGGCTCGGCCACAACGCGCGGATCCG CACGCCGGGCGGCGCGCGCGTGCTCGGCGTGCATCTGGAAGGGCCGTACATCAATCCCGGCAAGCTCGGCGCGCAACCGG ACGCGGCGGTCTCGGCGGTAATGGACGAAGTGCTGAAGTATCTGTCCATCGCGCCGATTCGCGTGGTCACGCTGGCGCCG GAGATTGCCGGCCATATGGAGATCATCTCCGAGATGGCGGCGCGCGGCGTGCGCGTGCAACTGGGCCATTCGCTCGGCAC CTACGACGACGCCGTCGCCGCGCTCAAGCACGGCGCCTGCGGCTTCACGCATCTGTTCAACGCGATGTCGCCGCTGCACC ATCGCAATCCCGGACTCGTCGGCGCGGCGCTCGCGCACGCCGAGTTCGCCGAAATCATTCCCGATCTGCTGCACGTGCAT CCGGGTGCGATCCGCGCGGCGTTGCGCGCGATTCCGCGTCTCTACGTGGTCACGGACAGCACCTCGGCCACCGGCATGCC CGACGGCGAATACCGCCTCGGCAGCCAGCATGTGACGAAGTGCCTCGGCGGCGTGCGTCTCGCCGACGGCACGCTCGCCG GCAGCACCCTGACGATGGATCAGGCGCTGCGCAATCTCGTGTCGATCGGCTTGCCGATCGCCGATGTATCGAACCGTTTG TCGCGCTACGCCGCCGACTACCTGGGCATCGAAGACCGCGGCCGCATCGCGCGCGGTGCATGGGCCGACGTGGTCGTGTT CGATCGTGAACTGGCGTTGAGCGCGACTTACGTCGAAGGAGAAGCAATTGTCGAATATGCTTAA
Upstream 100 bases:
>100_bases AGCGCTCGAAGCCTGCAACTCAAGCTGCGCAGCCAGCGTGCGCAGCCGCCCTCAGGCGCCATTCAGTCACGCCCCGTATC ACGCCTCACCAGAGAGACTC
Downstream 100 bases:
>100_bases AGAGGCGCTGGCGTCCGCTGAAACGGTCGCCGCGCAACTCATGGATACCTCGCGCGTCGAGGCATTGGCGGCGAAGCTTG CGCAGCAGCCGCGTCATGTC
Product: N-acetylglucosamine 6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVMEGDRAIETITRTHARYGTTS LLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLEGPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAP EIAGHMEIISEMAARGVRVQLGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQALRNLVSIGLPIADVSNRL SRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEGEAIVEYA
Sequences:
>Translated_367_residues MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVMEGDRAIETITRTHARYGTTS LLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLEGPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAP EIAGHMEIISEMAARGVRVQLGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQALRNLVSIGLPIADVSNRL SRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEGEAIVEYA >Mature_367_residues MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVMEGDRAIETITRTHARYGTTS LLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLEGPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAP EIAGHMEIISEMAARGVRVQLGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMDQALRNLVSIGLPIADVSNRL SRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEGEAIVEYA
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=418, Percent_Identity=33.0143540669856, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI224922791, Length=416, Percent_Identity=33.1730769230769, Blast_Score=164, Evalue=9e-41, Organism=Escherichia coli, GI1786892, Length=337, Percent_Identity=34.1246290801187, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17553768, Length=344, Percent_Identity=32.8488372093023, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI19920392, Length=340, Percent_Identity=35.2941176470588, Blast_Score=178, Evalue=5e-45, Organism=Drosophila melanogaster, GI281361140, Length=354, Percent_Identity=33.8983050847458, Blast_Score=172, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 38826; Mature: 38826
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVM CCCCCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCHH EGDRAIETITRTHARYGTTSLLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLE CCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEEEC GPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAPEIAGHMEIISEMAARGVRVQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCEEEE LGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH ECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMD CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEHH QALRNLVSIGLPIADVSNRLSRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEG HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHEEEEEEECC EAIVEYA CEEEECC >Mature Secondary Structure MLTGNILTTDGWIHGTLEYENGRITALAGDRVDPSTNDAPYILPGFIDLHVHGGGGADVM CCCCCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCHH EGDRAIETITRTHARYGTTSLLATTMTAPRDELMSVVAGLGHNARIRTPGGARVLGVHLE CCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEEEC GPYINPGKLGAQPDAAVSAVMDEVLKYLSIAPIRVVTLAPEIAGHMEIISEMAARGVRVQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCEEEE LGHSLGTYDDAVAALKHGACGFTHLFNAMSPLHHRNPGLVGAALAHAEFAEIIPDLLHVH ECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC PGAIRAALRAIPRLYVVTDSTSATGMPDGEYRLGSQHVTKCLGGVRLADGTLAGSTLTMD CHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCEEEHH QALRNLVSIGLPIADVSNRLSRYAADYLGIEDRGRIARGAWADVVVFDRELALSATYVEG HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHEEEEEEECC EAIVEYA CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA