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The map label for this gene is yegW [H]

Identifier: 91781690

GI number: 91781690

Start: 339660

End: 340394

Strand: Direct

Name: yegW [H]

Synonym: Bxe_A4156

Alternate gene names: 91781690

Gene position: 339660-340394 (Clockwise)

Preceding gene: 91781688

Following gene: 91781691

Centisome position: 6.94

GC content: 65.58

Gene sequence:

>735_bases
ATGGAAACTCGCTGGTCCGCACTGATGCCTGACGCCCGCAACGTCACGCCGCTCTATTTGCAGCTCGCGCGCAATCTTGC
GACAGCGATTCATTGCGGCGTGTGGTCGGCGGGCGAGGCGCTGCCCTCGGAGCGTACGCTTTCGGACGCGATCGGCGTGT
CGCGCATCACGGCACGCAAGGCGATCGAGTTGCTGGTCGAGCAAGGCCTGATCCGGCGCGCGCGTGGCGCGGGCAGTTTC
ATCACGCCGCGCGTCGAAGACCCGCTCTCGCGGCTCACCGGTTTCACGAAGAAGATGCAGCAGCGTGGTTTCCGGCCGGA
TTCGGTATGGCTCGAGCGCGATATCCGCGCCGCCAACCGTGACGAACTGGTTCATCTCGGGCTGTCGCCCGGCGCGGCGG
TGGCGAGTCTGCGGCGCTTGCGGCGCGCGGACGGCATCGTCATGGCGGTCGAGCATTCGGCGCTGCCGGCCGCGATCGTG
CCCGACCCGCAAGCCATCGGCGATTCGCTTTACAGCTATCTCGAACATCGTGGCGCGGCGGTCGTGCGCGCGCTGCAGCA
CTTTCGCGCGGTCAACGCTTCGAGCGAGATCGCCGCGTTGATGGATATCGAACCGCGCTCGGCGCTGCTGGTCATTACCC
GTATTGGCTATAGCGCCGACCAGCGCGCAATCGAGCTCACCGACACGTATTGCCGCGACGATTACTACGACTTTGTCGCT
GAATTGCGCACCTGA

Upstream 100 bases:

>100_bases
TACCAACATGGAACCAGTCGATTGACTGGTATTATGTTGGTTATATAATGGGCTCTCATTTTTCGTAGGCCTACCTTTTC
GCGACGGCCGCCGGAGTCTC

Downstream 100 bases:

>100_bases
TCGGCTCGACCAGGCAGCGCTCGAAGCCTGCAACTCAAGCTGCGCAGCCAGCGTGCGCAGCCGCCCTCAGGCGCCATTCA
GTCACGCCCCGTATCACGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
METRWSALMPDARNVTPLYLQLARNLATAIHCGVWSAGEALPSERTLSDAIGVSRITARKAIELLVEQGLIRRARGAGSF
ITPRVEDPLSRLTGFTKKMQQRGFRPDSVWLERDIRAANRDELVHLGLSPGAAVASLRRLRRADGIVMAVEHSALPAAIV
PDPQAIGDSLYSYLEHRGAAVVRALQHFRAVNASSEIAALMDIEPRSALLVITRIGYSADQRAIELTDTYCRDDYYDFVA
ELRT

Sequences:

>Translated_244_residues
METRWSALMPDARNVTPLYLQLARNLATAIHCGVWSAGEALPSERTLSDAIGVSRITARKAIELLVEQGLIRRARGAGSF
ITPRVEDPLSRLTGFTKKMQQRGFRPDSVWLERDIRAANRDELVHLGLSPGAAVASLRRLRRADGIVMAVEHSALPAAIV
PDPQAIGDSLYSYLEHRGAAVVRALQHFRAVNASSEIAALMDIEPRSALLVITRIGYSADQRAIELTDTYCRDDYYDFVA
ELRT
>Mature_244_residues
METRWSALMPDARNVTPLYLQLARNLATAIHCGVWSAGEALPSERTLSDAIGVSRITARKAIELLVEQGLIRRARGAGSF
ITPRVEDPLSRLTGFTKKMQQRGFRPDSVWLERDIRAANRDELVHLGLSPGAAVASLRRLRRADGIVMAVEHSALPAAIV
PDPQAIGDSLYSYLEHRGAAVVRALQHFRAVNASSEIAALMDIEPRSALLVITRIGYSADQRAIELTDTYCRDDYYDFVA
ELRT

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=226, Percent_Identity=34.070796460177, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1786950, Length=224, Percent_Identity=29.9107142857143, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082252, Length=220, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790540, Length=212, Percent_Identity=28.3018867924528, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790118, Length=230, Percent_Identity=25.2173913043478, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 26964; Mature: 26964

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRWSALMPDARNVTPLYLQLARNLATAIHCGVWSAGEALPSERTLSDAIGVSRITARK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AIELLVEQGLIRRARGAGSFITPRVEDPLSRLTGFTKKMQQRGFRPDSVWLERDIRAANR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
DELVHLGLSPGAAVASLRRLRRADGIVMAVEHSALPAAIVPDPQAIGDSLYSYLEHRGAA
CCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHH
VVRALQHFRAVNASSEIAALMDIEPRSALLVITRIGYSADQRAIELTDTYCRDDYYDFVA
HHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHH
ELRT
HHCC
>Mature Secondary Structure
METRWSALMPDARNVTPLYLQLARNLATAIHCGVWSAGEALPSERTLSDAIGVSRITARK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AIELLVEQGLIRRARGAGSFITPRVEDPLSRLTGFTKKMQQRGFRPDSVWLERDIRAANR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
DELVHLGLSPGAAVASLRRLRRADGIVMAVEHSALPAAIVPDPQAIGDSLYSYLEHRGAA
CCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHH
VVRALQHFRAVNASSEIAALMDIEPRSALLVITRIGYSADQRAIELTDTYCRDDYYDFVA
HHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHH
ELRT
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]