| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is glmS [H]
Identifier: 91781692
GI number: 91781692
Start: 341606
End: 342613
Strand: Direct
Name: glmS [H]
Synonym: Bxe_A4154
Alternate gene names: 91781692
Gene position: 341606-342613 (Clockwise)
Preceding gene: 91781691
Following gene: 91781693
Centisome position: 6.98
GC content: 66.57
Gene sequence:
>1008_bases ATGCTTAAAGAGGCGCTGGCGTCCGCTGAAACGGTCGCCGCGCAACTCATGGATACCTCGCGCGTCGAGGCATTGGCGGC GAAGCTTGCGCAGCAGCCGCGTCATGTCGCGCTGACGGTCGCGCGCGGCAGCTCCGACCATGCTGCGAGTTACTTCGCCA GCCTGACGATGAGCCGCCTCGGCGTGCCGGTCGCCTCGCTGCCGATGTCGGTCGCCACGCTCCAGCAAGCGCCGCTGCAG GTGTGCGATCAGCTCGCGCTGGCCTTCTCGCAATCGGGCAAGAGCCCGGATCTGGTCGGCACGATGGAAGCGCTGCGCAA AGCGGGCGCCTTGACGGTAGCCGCTGTCAACGTGTCGGGCTCACCCCTGGCCGACGCGTGCGAATTCGAGTTGCCGCTCG TCGCCGGTCCGGAACTGAGCGTCGCGGCCACCAAGAGCTATATCGCGATGCTGTCGATTTCCGCGCAACTCGTCGCGCAT TGGCAGAAAGACGCCGAACTGCTCGCGGCGTTGAAGACGCTGCCCGAAGCACTGCGTGCGGCAGGCAAGCTCGACTGGTC GAATGCCGTGGAGGAATTGCGCGGCGTGGAGCGCATGATCGTGATCGGTCGCGGTCTGGGTCTTGCAATCGCGCAGGAAG CCGCGTTGAAACTGAAGGAAACCTCCGGCATTCAGGCCGAAGCGTTTTCGAGCGCGGAAGTGCGTCACGGTCCGATGGAA CTGATCGACCGCGACTACCCGCTGCTGGTCTTCGCACCGCGCGGTCCGGAACAGGCCGGCTTGCTGCAACTCGCGCGCGA CATGCAGGCGCGCGGCGCCCGTGTTCTGCTCGCGGCGCCGGCCGACGTGCCGGAAGCCACGCTGCCGCTCGCCATCACCG CTCATGCGGCGCTCGATCCGATCGCCGCCATCCTGTCCTTTTACGTGATGGCAGCCGGCCTTGCCGCCGCGCGCGGGCGC AATCCCGATGCGCCGCGCCATCTCAACAAAGTCACCGAAACTCACTGA
Upstream 100 bases:
>100_bases CGCGGCCGCATCGCGCGCGGTGCATGGGCCGACGTGGTCGTGTTCGATCGTGAACTGGCGTTGAGCGCGACTTACGTCGA AGGAGAAGCAATTGTCGAAT
Downstream 100 bases:
>100_bases CGAGAAATCAGATGCGACGTGTCGAGGAGTCCCGCTTGATGAGCCATTCTGAAGGCCATATCGTTTTACTCGCGCCCATG ACCGGTCCGGTCGTGCCGCT
Product: glutamine-fructose-6-phosphate transaminase(isomerizing)
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLKEALASAETVAAQLMDTSRVEALAAKLAQQPRHVALTVARGSSDHAASYFASLTMSRLGVPVASLPMSVATLQQAPLQ VCDQLALAFSQSGKSPDLVGTMEALRKAGALTVAAVNVSGSPLADACEFELPLVAGPELSVAATKSYIAMLSISAQLVAH WQKDAELLAALKTLPEALRAAGKLDWSNAVEELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME LIDRDYPLLVFAPRGPEQAGLLQLARDMQARGARVLLAAPADVPEATLPLAITAHAALDPIAAILSFYVMAAGLAAARGR NPDAPRHLNKVTETH
Sequences:
>Translated_335_residues MLKEALASAETVAAQLMDTSRVEALAAKLAQQPRHVALTVARGSSDHAASYFASLTMSRLGVPVASLPMSVATLQQAPLQ VCDQLALAFSQSGKSPDLVGTMEALRKAGALTVAAVNVSGSPLADACEFELPLVAGPELSVAATKSYIAMLSISAQLVAH WQKDAELLAALKTLPEALRAAGKLDWSNAVEELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME LIDRDYPLLVFAPRGPEQAGLLQLARDMQARGARVLLAAPADVPEATLPLAITAHAALDPIAAILSFYVMAAGLAAARGR NPDAPRHLNKVTETH >Mature_335_residues MLKEALASAETVAAQLMDTSRVEALAAKLAQQPRHVALTVARGSSDHAASYFASLTMSRLGVPVASLPMSVATLQQAPLQ VCDQLALAFSQSGKSPDLVGTMEALRKAGALTVAAVNVSGSPLADACEFELPLVAGPELSVAATKSYIAMLSISAQLVAH WQKDAELLAALKTLPEALRAAGKLDWSNAVEELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME LIDRDYPLLVFAPRGPEQAGLLQLARDMQARGARVLLAAPADVPEATLPLAITAHAALDPIAAILSFYVMAAGLAAARGR NPDAPRHLNKVTETH
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=264, Percent_Identity=28.030303030303, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI205277386, Length=263, Percent_Identity=26.9961977186312, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1790167, Length=264, Percent_Identity=29.5454545454545, Blast_Score=101, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17539970, Length=266, Percent_Identity=27.8195488721804, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17532899, Length=264, Percent_Identity=27.2727272727273, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17532897, Length=264, Percent_Identity=27.2727272727273, Blast_Score=105, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6322745, Length=308, Percent_Identity=26.6233766233766, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323731, Length=183, Percent_Identity=26.775956284153, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357745, Length=353, Percent_Identity=25.2124645892351, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 35022; Mature: 35022
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEALASAETVAAQLMDTSRVEALAAKLAQQPRHVALTVARGSSDHAASYFASLTMSRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH GVPVASLPMSVATLQQAPLQVCDQLALAFSQSGKSPDLVGTMEALRKAGALTVAAVNVSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCC SPLADACEFELPLVAGPELSVAATKSYIAMLSISAQLVAHWQKDAELLAALKTLPEALRA CCCCCHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKLDWSNAVEELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME HCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCHH LIDRDYPLLVFAPRGPEQAGLLQLARDMQARGARVLLAAPADVPEATLPLAITAHAALDP HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHHHH IAAILSFYVMAAGLAAARGRNPDAPRHLNKVTETH HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLKEALASAETVAAQLMDTSRVEALAAKLAQQPRHVALTVARGSSDHAASYFASLTMSRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH GVPVASLPMSVATLQQAPLQVCDQLALAFSQSGKSPDLVGTMEALRKAGALTVAAVNVSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCC SPLADACEFELPLVAGPELSVAATKSYIAMLSISAQLVAHWQKDAELLAALKTLPEALRA CCCCCHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKLDWSNAVEELRGVERMIVIGRGLGLAIAQEAALKLKETSGIQAEAFSSAEVRHGPME HCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCHH LIDRDYPLLVFAPRGPEQAGLLQLARDMQARGARVLLAAPADVPEATLPLAITAHAALDP HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHHHH IAAILSFYVMAAGLAAARGRNPDAPRHLNKVTETH HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]