| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781597
Identifier: 91781597
GI number: 91781597
Start: 247755
End: 248573
Strand: Reverse
Name: 91781597
Synonym: Bxe_A4249
Alternate gene names: NA
Gene position: 248573-247755 (Counterclockwise)
Preceding gene: 91781598
Following gene: 91781596
Centisome position: 5.08
GC content: 66.91
Gene sequence:
>819_bases ATGCAACCGGGTGCGGTCGATGCAGCCGGCGTCGCGCACGAACCCGCAGGACCCGCGGCACGTATCGTCTCGCTGGTGCC GAGCATCACCGAACTGCTGTTCGCGCTCGGTCTGGACCGGCAGATTGTCGGCCGCACGGGTTTCTGCGTGCATCCGCACG ACAAGGCGCGCCAGGTCCGCAAGGTCGGCGGCACCAAGGCCGTGAATCCCGACGCCATTCGCGCGTTGCGCCCCACCCAT CTGATCGTCAATATCGACGAAAACGAGCGCGATACCGTCGAGCAATTGCGCGGGTTCGTGCCGCATATCGTCGTGACGCA TCCGCAGACACCGCGGGACAATCTGGCGCTCTACACGCTGCTGGGCGCGATCTTCGATCGCGCGCGGGAAGCGGAGCGTC TGGGCGAAGCGCTCGAAGCCCGTCTGCACGAGGCGGCCGCGCACGCGTTCACGCCGCAAAACGTGCTGTATCTGATCTGG CGCGAGCCCTGGATGACCGTGGCGCGCGATACTTATATCTCCGCGATGCTGAGGCTCGTGAACTGGCACACGCTGCCCGA TGTGCAAGGCGGTACGGCAGGCGCCGGACGCTACCCGGCGCTCGACTTCGACAGCGCGCCGTGGCTCGCCCGTGTCGAGC GCGTCCTGCTCTCCAGCGAGCCGTATCGCTTTACGCAGACCCATTGCGACGCACTGAAGCGCGATGCGCGGCTGGCCGGC AAGCGCATCGAGCTGATCGACGGGGAAATGGTGTCGTGGTACGGCGTGCGCGCGATCGAAGGCATTGCGTACCTGCTGCG GCGCGCCGCGGCGGCATGA
Upstream 100 bases:
>100_bases CGTGGCCATGCTGCTGCATGTGCTGCCGCGCTGGCTCTACGACCGTGCGTTCGAGCGCGCGCCGCGCAAGCCGCGCACCG CCGCCGAGGTCGAGTAAGCC
Downstream 100 bases:
>100_bases ACGCAGGCTGCGCGCCGCGAGGCCGGCCACAACCCGTCCATATGAATATGTGGATTATGTTGTTGTCGGCGCAACCACCC TTCGATAAGCTTTCGCGAAG
Product: iron ABC transporter periplasmic ligand-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQPGAVDAAGVAHEPAGPAARIVSLVPSITELLFALGLDRQIVGRTGFCVHPHDKARQVRKVGGTKAVNPDAIRALRPTH LIVNIDENERDTVEQLRGFVPHIVVTHPQTPRDNLALYTLLGAIFDRAREAERLGEALEARLHEAAAHAFTPQNVLYLIW REPWMTVARDTYISAMLRLVNWHTLPDVQGGTAGAGRYPALDFDSAPWLARVERVLLSSEPYRFTQTHCDALKRDARLAG KRIELIDGEMVSWYGVRAIEGIAYLLRRAAAA
Sequences:
>Translated_272_residues MQPGAVDAAGVAHEPAGPAARIVSLVPSITELLFALGLDRQIVGRTGFCVHPHDKARQVRKVGGTKAVNPDAIRALRPTH LIVNIDENERDTVEQLRGFVPHIVVTHPQTPRDNLALYTLLGAIFDRAREAERLGEALEARLHEAAAHAFTPQNVLYLIW REPWMTVARDTYISAMLRLVNWHTLPDVQGGTAGAGRYPALDFDSAPWLARVERVLLSSEPYRFTQTHCDALKRDARLAG KRIELIDGEMVSWYGVRAIEGIAYLLRRAAAA >Mature_272_residues MQPGAVDAAGVAHEPAGPAARIVSLVPSITELLFALGLDRQIVGRTGFCVHPHDKARQVRKVGGTKAVNPDAIRALRPTH LIVNIDENERDTVEQLRGFVPHIVVTHPQTPRDNLALYTLLGAIFDRAREAERLGEALEARLHEAAAHAFTPQNVLYLIW REPWMTVARDTYISAMLRLVNWHTLPDVQGGTAGAGRYPALDFDSAPWLARVERVLLSSEPYRFTQTHCDALKRDARLAG KRIELIDGEMVSWYGVRAIEGIAYLLRRAAAA
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30096; Mature: 30096
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPGAVDAAGVAHEPAGPAARIVSLVPSITELLFALGLDRQIVGRTGFCVHPHDKARQVR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCHHHHHHH KVGGTKAVNPDAIRALRPTHLIVNIDENERDTVEQLRGFVPHIVVTHPQTPRDNLALYTL HHCCCCCCCHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH LGAIFDRAREAERLGEALEARLHEAAAHAFTPQNVLYLIWREPWMTVARDTYISAMLRLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NWHTLPDVQGGTAGAGRYPALDFDSAPWLARVERVLLSSEPYRFTQTHCDALKRDARLAG HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC KRIELIDGEMVSWYGVRAIEGIAYLLRRAAAA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQPGAVDAAGVAHEPAGPAARIVSLVPSITELLFALGLDRQIVGRTGFCVHPHDKARQVR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCHHHHHHH KVGGTKAVNPDAIRALRPTHLIVNIDENERDTVEQLRGFVPHIVVTHPQTPRDNLALYTL HHCCCCCCCHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH LGAIFDRAREAERLGEALEARLHEAAAHAFTPQNVLYLIWREPWMTVARDTYISAMLRLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NWHTLPDVQGGTAGAGRYPALDFDSAPWLARVERVLLSSEPYRFTQTHCDALKRDARLAG HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC KRIELIDGEMVSWYGVRAIEGIAYLLRRAAAA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA