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The map label for this gene is ylaB [C]

Identifier: 91781562

GI number: 91781562

Start: 208929

End: 210779

Strand: Reverse

Name: ylaB [C]

Synonym: Bxe_A4283

Alternate gene names: 91781562

Gene position: 210779-208929 (Counterclockwise)

Preceding gene: 91781563

Following gene: 91781561

Centisome position: 4.31

GC content: 65.42

Gene sequence:

>1851_bases
ATGCAACCTAGCCCGCCCTCCCGATCCGCCGCGCCGCGCATCGAGGAACTGATAGCCCGGCGCGATCTGTCCGCCGTTTT
CCAGCCAATCATCGATTTCGAAGACGGCGCGATCCTCGGCTACGAAGGTCTGATTCGCGGGCCGGCGGGCACGCCGCTCG
AAGCACCGTTCGCGCTGTTTTCGCAAGCGCTCGCCGAGGGCTGCGGCATCGCACTCGAACGCGCCGCCGCGCGCACCTGC
ATCGAAGCGTTCGCGCGGCTCGAATTCGACGGCAAGCTGTTTCTGAATTTCAGCGCGGGCGCACTCCGCCAACTGGCCGG
GACGCGCGATGAAACGCTAGCGCTCCTGCGTCATCACGGCGTCGATCCGCAGCGGCTGGTAATCGAGCTGACGGAGCAAA
GCACGATTCCCGACGTGGGCAGTTTCCTGCCCGTGATCGCGGCGCTGCGCAGTGACGGCGCGCAATTCGCGCTCGACGAT
TACGGCACCGCGAACGCCAGCATGAACCTGTGGGTGCGGTTGCAGCCGGACGTCGTGAAGATCGACCGCTTCTTCATTCA
CGACATTGCCTGCGACCCGCTCAAGTTCGAAGCCGTGCGCGCCATGCAGCACTTCGCCAGCGCAAGCGGTGCGCGGCTCG
TGGCCGAGGGCATCGAAAACGAAGCGGACCTGATCGTGGTGCGCGACATGGGGATCGGCTGCGGTCAGGGGTTTTTCTTC
GGCCGTCCGCACGCGCAGCCGGCCCGCAAGGTGACCGACGACGCCCGCGACGCGCTTCGCGCCGGCCACATCGCGGTGTT
TCCCGAAACCACGCGCACGGTGAGCAGTGCGTCGCCTTCGGGCGGCATGGCGTCGGCGAAAATGCTGGTGCACGCGCCCG
CGCTGCCGCGCCAGGCCACCAATAACGACGTGCTCGAACTGTTCAACCGTCTGCCCGACCTGCACGCGGTCGCGGTGGTC
GAGCACGACGAGCCGGTCGCGCTGATCAACCGCCGCAGTTTCATGGACCGCTACGCGCTGCCGTATCACCGGGAACTGTT
CGGCAAGCGCCCTTGCCTGCTGTTCGCCAACGCGTCGCCGGTCATCATCGAAAAATCGATGACGGTCGAGCAGATGGCCA
AGCTCCTCGCGAGCGACGATCAGCGCTATCTCGCCGATGGCTTCGTCATCACCGACAACGGCAAATACGCCGGCCTCGGC
ACCGGCGAAAACCTCGTGCGCGCGGTGACCGAGGTGCGCATCGAAGCGGCGCGCTACGCGAATCCGCTGACCTTCCTGCC
GGGCAATATCCCGATCAGTTCGCACATTGCCCGCCTGCTCGGCAACGACGCCGGTTTCTACGCGTGCTACGTCGATCTGA
ATCACTTCAAGCCGTTCAACGATCAATACGGCTACTGGCAAGGCGACGAAGTGTTGAAATTCGCGGCCCTCGTGCTCGCC
GACGTGTGCGACCCGACCCGCGACTTCCTCGGACACGTGGGCGGCGACGACTTCCTGATTCTGTTCCAGAGCGAAGACTG
GCGCGAACGCGTGCTGCGCGCGATCCACGTATTCAACGAGGGCGCGCAGCGCTTTTACGCGCCGGCCGACCGGCTCGCCG
GCGGTATTCACGGCGAGGACCGGCGCGGCAATCCGACCTTCTTCGGTTTCGTGACGATGGCGATCGGCTGCGTGCACGTC
GAGCCCGGCGAGGGACCGTCGCTCTATACCAGCGAGGAAATCGCCTCCGTTGCGGCACTGGCCAAGCGGCGCGCGAAACA
CGAGGCGAGCGGTTTCGTGCTGATCGACGCGGACGAGAGCGTGGCGTTACTGCGTGGACAAGCAGAAGCCGTGCATGTCT
CGCTAGAGTGA

Upstream 100 bases:

>100_bases
ATCCAGCCGCACCGCGCCGGTGCGACGCGTCACTAAAAGTTCACTTAATTACCCGCAGGTCCGGCCGATAAGCCAAAGGT
CGATCGCTACCCCACCTGCC

Downstream 100 bases:

>100_bases
AGATGCGGCTTACCGAGGCGGCTTCGGAGATTGTTTAGCTAATTTTACTAAACATAAAATTTCGGACCAAGACCATAGCG
TACGGGTATTTACGGGTATC

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MQPSPPSRSAAPRIEELIARRDLSAVFQPIIDFEDGAILGYEGLIRGPAGTPLEAPFALFSQALAEGCGIALERAAARTC
IEAFARLEFDGKLFLNFSAGALRQLAGTRDETLALLRHHGVDPQRLVIELTEQSTIPDVGSFLPVIAALRSDGAQFALDD
YGTANASMNLWVRLQPDVVKIDRFFIHDIACDPLKFEAVRAMQHFASASGARLVAEGIENEADLIVVRDMGIGCGQGFFF
GRPHAQPARKVTDDARDALRAGHIAVFPETTRTVSSASPSGGMASAKMLVHAPALPRQATNNDVLELFNRLPDLHAVAVV
EHDEPVALINRRSFMDRYALPYHRELFGKRPCLLFANASPVIIEKSMTVEQMAKLLASDDQRYLADGFVITDNGKYAGLG
TGENLVRAVTEVRIEAARYANPLTFLPGNIPISSHIARLLGNDAGFYACYVDLNHFKPFNDQYGYWQGDEVLKFAALVLA
DVCDPTRDFLGHVGGDDFLILFQSEDWRERVLRAIHVFNEGAQRFYAPADRLAGGIHGEDRRGNPTFFGFVTMAIGCVHV
EPGEGPSLYTSEEIASVAALAKRRAKHEASGFVLIDADESVALLRGQAEAVHVSLE

Sequences:

>Translated_616_residues
MQPSPPSRSAAPRIEELIARRDLSAVFQPIIDFEDGAILGYEGLIRGPAGTPLEAPFALFSQALAEGCGIALERAAARTC
IEAFARLEFDGKLFLNFSAGALRQLAGTRDETLALLRHHGVDPQRLVIELTEQSTIPDVGSFLPVIAALRSDGAQFALDD
YGTANASMNLWVRLQPDVVKIDRFFIHDIACDPLKFEAVRAMQHFASASGARLVAEGIENEADLIVVRDMGIGCGQGFFF
GRPHAQPARKVTDDARDALRAGHIAVFPETTRTVSSASPSGGMASAKMLVHAPALPRQATNNDVLELFNRLPDLHAVAVV
EHDEPVALINRRSFMDRYALPYHRELFGKRPCLLFANASPVIIEKSMTVEQMAKLLASDDQRYLADGFVITDNGKYAGLG
TGENLVRAVTEVRIEAARYANPLTFLPGNIPISSHIARLLGNDAGFYACYVDLNHFKPFNDQYGYWQGDEVLKFAALVLA
DVCDPTRDFLGHVGGDDFLILFQSEDWRERVLRAIHVFNEGAQRFYAPADRLAGGIHGEDRRGNPTFFGFVTMAIGCVHV
EPGEGPSLYTSEEIASVAALAKRRAKHEASGFVLIDADESVALLRGQAEAVHVSLE
>Mature_616_residues
MQPSPPSRSAAPRIEELIARRDLSAVFQPIIDFEDGAILGYEGLIRGPAGTPLEAPFALFSQALAEGCGIALERAAARTC
IEAFARLEFDGKLFLNFSAGALRQLAGTRDETLALLRHHGVDPQRLVIELTEQSTIPDVGSFLPVIAALRSDGAQFALDD
YGTANASMNLWVRLQPDVVKIDRFFIHDIACDPLKFEAVRAMQHFASASGARLVAEGIENEADLIVVRDMGIGCGQGFFF
GRPHAQPARKVTDDARDALRAGHIAVFPETTRTVSSASPSGGMASAKMLVHAPALPRQATNNDVLELFNRLPDLHAVAVV
EHDEPVALINRRSFMDRYALPYHRELFGKRPCLLFANASPVIIEKSMTVEQMAKLLASDDQRYLADGFVITDNGKYAGLG
TGENLVRAVTEVRIEAARYANPLTFLPGNIPISSHIARLLGNDAGFYACYVDLNHFKPFNDQYGYWQGDEVLKFAALVLA
DVCDPTRDFLGHVGGDDFLILFQSEDWRERVLRAIHVFNEGAQRFYAPADRLAGGIHGEDRRGNPTFFGFVTMAIGCVHV
EPGEGPSLYTSEEIASVAALAKRRAKHEASGFVLIDADESVALLRGQAEAVHVSLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=245, Percent_Identity=28.1632653061224, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=25.4098360655738, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI87082096, Length=130, Percent_Identity=31.5384615384615, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787541, Length=226, Percent_Identity=29.646017699115, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI226510982, Length=229, Percent_Identity=27.9475982532751, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1786507, Length=233, Percent_Identity=26.1802575107296, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1788849, Length=134, Percent_Identity=31.3432835820896, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787055, Length=233, Percent_Identity=27.8969957081545, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081845, Length=247, Percent_Identity=25.9109311740891, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081980, Length=120, Percent_Identity=30, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788502, Length=234, Percent_Identity=25.6410256410256, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 67208; Mature: 67208

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSPPSRSAAPRIEELIARRDLSAVFQPIIDFEDGAILGYEGLIRGPAGTPLEAPFALF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCHHHHH
SQALAEGCGIALERAAARTCIEAFARLEFDGKLFLNFSAGALRQLAGTRDETLALLRHHG
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCHHHHHHHHHHCC
VDPQRLVIELTEQSTIPDVGSFLPVIAALRSDGAQFALDDYGTANASMNLWVRLQPDVVK
CCHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCHHH
IDRFFIHDIACDPLKFEAVRAMQHFASASGARLVAEGIENEADLIVVRDMGIGCGQGFFF
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCC
GRPHAQPARKVTDDARDALRAGHIAVFPETTRTVSSASPSGGMASAKMLVHAPALPRQAT
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHHHEEECCCCCCCCC
NNDVLELFNRLPDLHAVAVVEHDEPVALINRRSFMDRYALPYHRELFGKRPCLLFANASP
CHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCC
VIIEKSMTVEQMAKLLASDDQRYLADGFVITDNGKYAGLGTGENLVRAVTEVRIEAARYA
EEEECCCCHHHHHHHHHCCCCEEECCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHC
NPLTFLPGNIPISSHIARLLGNDAGFYACYVDLNHFKPFNDQYGYWQGDEVLKFAALVLA
CCCEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
DVCDPTRDFLGHVGGDDFLILFQSEDWRERVLRAIHVFNEGAQRFYAPADRLAGGIHGED
HHCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
RRGNPTFFGFVTMAIGCVHVEPGEGPSLYTSEEIASVAALAKRRAKHEASGFVLIDADES
CCCCCCEEHEEHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
VALLRGQAEAVHVSLE
EEEEECCCEEEEEEEC
>Mature Secondary Structure
MQPSPPSRSAAPRIEELIARRDLSAVFQPIIDFEDGAILGYEGLIRGPAGTPLEAPFALF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCHHHHH
SQALAEGCGIALERAAARTCIEAFARLEFDGKLFLNFSAGALRQLAGTRDETLALLRHHG
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCHHHHHHHHHHCC
VDPQRLVIELTEQSTIPDVGSFLPVIAALRSDGAQFALDDYGTANASMNLWVRLQPDVVK
CCHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCHHH
IDRFFIHDIACDPLKFEAVRAMQHFASASGARLVAEGIENEADLIVVRDMGIGCGQGFFF
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCC
GRPHAQPARKVTDDARDALRAGHIAVFPETTRTVSSASPSGGMASAKMLVHAPALPRQAT
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHHHEEECCCCCCCCC
NNDVLELFNRLPDLHAVAVVEHDEPVALINRRSFMDRYALPYHRELFGKRPCLLFANASP
CHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCC
VIIEKSMTVEQMAKLLASDDQRYLADGFVITDNGKYAGLGTGENLVRAVTEVRIEAARYA
EEEECCCCHHHHHHHHHCCCCEEECCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHC
NPLTFLPGNIPISSHIARLLGNDAGFYACYVDLNHFKPFNDQYGYWQGDEVLKFAALVLA
CCCEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
DVCDPTRDFLGHVGGDDFLILFQSEDWRERVLRAIHVFNEGAQRFYAPADRLAGGIHGED
HHCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
RRGNPTFFGFVTMAIGCVHVEPGEGPSLYTSEEIASVAALAKRRAKHEASGFVLIDADES
CCCCCCEEHEEHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
VALLRGQAEAVHVSLE
EEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]