| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yfeH [C]
Identifier: 91781563
GI number: 91781563
Start: 211067
End: 212095
Strand: Reverse
Name: yfeH [C]
Synonym: Bxe_A4282
Alternate gene names: 91781563
Gene position: 212095-211067 (Counterclockwise)
Preceding gene: 91781564
Following gene: 91781562
Centisome position: 4.33
GC content: 65.99
Gene sequence:
>1029_bases ATGGCTCGCCCGAAACTGCTTCCCGACAACTTCACCTTGTGCCTCGTCAGCACCGTGATCCTTGCCAGCTTCCTGCCGGT TCACGGTCAGGCCGCCGTCGGGTTCAACTGGGTGACGAACGTGGCGGTCGGCCTGCTGTTTTTCCTGCACGGCGCCAAAC TCTCACGCGAAGCGATCGTTGCGGGCGCGACGCACTGGCGCTTGCACGCGGTAGTGCTGCTCAGCACGTTCGCGCTGTTT CCGCTGCTCGGCCTCGCGCTTAAACCGCTCCTTTCGCCACTTGTCACGCCGGCGCTCTATGCGGGGGTCCTCTTCCTCTG CACGCTGCCGTCTACGGTTCAGTCGTCGATCGCGTTCACGTCCATTGCCAAAGGCAACGTGCCGGCTGCCGTATGCAGCG CGTCGGCCTCGAGCCTGCTCGGCATCTTCATCACGCCCGCACTCGTCAGCGTCGTCATCACCAATCAGGCGGCCGGCGGC GGTGCTTCGCCGTGGCACACGGTGGGCAATATCGTGCTGCAGCTTCTGGTGCCGTTCGTGGCCGGGCAGTTGCTGCGCCC GCTGATCGGCAAGTGGATCGAGCGCAATCGCGGCGTGCTGAAATTCGTCGACCAGGGCTCGATCCTGCTGGTGGTGTACG GCGCATTCAGCGAGGCCGTTACCGAAGGCCTGTGGCACCAGATTCCGCTCTCCGCGCTCGGCGGCCTGCTGGTGGTGTGC GTCGTGCTGTTGGCTCTCGCTCTGGCTGTAACGATGTTCGTCAGCAAGCGGCTCGGCTTTAGCCGCGCGGACCAGATCAC CATCATCTTCTGCGGTTCGAAGAAGAGTCTCGCCGCCGGCGTGCCGATGGCCAAGGTGATTTTCGCCTCGCATGCGGTGG GCGCGGTGGTCTTGCCGCTCATGCTGTTCCACCAGATCCAGTTGATGGTGTGCGCCGCGCTCGCGCAGCGCTGGGGCGCG CGCGACACCAGCGGCGAGACCCGCGCCGCCTCGCGCGAGCGGCCCGCCGCCGCCGTCGCGCGCCATTGA
Upstream 100 bases:
>100_bases ATCAGAAATCAACAACAATAGACGTTTCCCATAAGCTGGAGCGGCGCCTTCATACGTGCGGCCCGCGTGCTTTTCCGCGT CACTGAATCGAGATTCCGAT
Downstream 100 bases:
>100_bases ATACGCGCGCAATGCAAACAGGACATTCATAAGCGCCCTCCCTGAGCGTCATTTGAAGAAAGCCGCCTCGCGCGGCTTTT TTGTTATTTCACGCGCAAAC
Product: putative sodium/bile acid symporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MARPKLLPDNFTLCLVSTVILASFLPVHGQAAVGFNWVTNVAVGLLFFLHGAKLSREAIVAGATHWRLHAVVLLSTFALF PLLGLALKPLLSPLVTPALYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCSASASSLLGIFITPALVSVVITNQAAGG GASPWHTVGNIVLQLLVPFVAGQLLRPLIGKWIERNRGVLKFVDQGSILLVVYGAFSEAVTEGLWHQIPLSALGGLLVVC VVLLALALAVTMFVSKRLGFSRADQITIIFCGSKKSLAAGVPMAKVIFASHAVGAVVLPLMLFHQIQLMVCAALAQRWGA RDTSGETRAASRERPAAAVARH
Sequences:
>Translated_342_residues MARPKLLPDNFTLCLVSTVILASFLPVHGQAAVGFNWVTNVAVGLLFFLHGAKLSREAIVAGATHWRLHAVVLLSTFALF PLLGLALKPLLSPLVTPALYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCSASASSLLGIFITPALVSVVITNQAAGG GASPWHTVGNIVLQLLVPFVAGQLLRPLIGKWIERNRGVLKFVDQGSILLVVYGAFSEAVTEGLWHQIPLSALGGLLVVC VVLLALALAVTMFVSKRLGFSRADQITIIFCGSKKSLAAGVPMAKVIFASHAVGAVVLPLMLFHQIQLMVCAALAQRWGA RDTSGETRAASRERPAAAVARH >Mature_341_residues ARPKLLPDNFTLCLVSTVILASFLPVHGQAAVGFNWVTNVAVGLLFFLHGAKLSREAIVAGATHWRLHAVVLLSTFALFP LLGLALKPLLSPLVTPALYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCSASASSLLGIFITPALVSVVITNQAAGGG ASPWHTVGNIVLQLLVPFVAGQLLRPLIGKWIERNRGVLKFVDQGSILLVVYGAFSEAVTEGLWHQIPLSALGGLLVVCV VLLALALAVTMFVSKRLGFSRADQITIIFCGSKKSLAAGVPMAKVIFASHAVGAVVLPLMLFHQIQLMVCAALAQRWGAR DTSGETRAASRERPAAAVARH
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=297, Percent_Identity=27.2727272727273, Blast_Score=113, Evalue=2e-25, Organism=Escherichia coli, GI1788749, Length=328, Percent_Identity=55.7926829268293, Blast_Score=324, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6323677, Length=389, Percent_Identity=24.9357326478149, Blast_Score=93, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 35917; Mature: 35786
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKLLPDNFTLCLVSTVILASFLPVHGQAAVGFNWVTNVAVGLLFFLHGAKLSREAIV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCHHHHH AGATHWRLHAVVLLSTFALFPLLGLALKPLLSPLVTPALYAGVLFLCTLPSTVQSSIAFT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SIAKGNVPAAVCSASASSLLGIFITPALVSVVITNQAAGGGASPWHTVGNIVLQLLVPFV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AGQLLRPLIGKWIERNRGVLKFVDQGSILLVVYGAFSEAVTEGLWHQIPLSALGGLLVVC HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH VVLLALALAVTMFVSKRLGFSRADQITIIFCGSKKSLAAGVPMAKVIFASHAVGAVVLPL HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHH MLFHQIQLMVCAALAQRWGARDTSGETRAASRERPAAAVARH HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHCCC >Mature Secondary Structure ARPKLLPDNFTLCLVSTVILASFLPVHGQAAVGFNWVTNVAVGLLFFLHGAKLSREAIV CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCHHHHH AGATHWRLHAVVLLSTFALFPLLGLALKPLLSPLVTPALYAGVLFLCTLPSTVQSSIAFT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SIAKGNVPAAVCSASASSLLGIFITPALVSVVITNQAAGGGASPWHTVGNIVLQLLVPFV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AGQLLRPLIGKWIERNRGVLKFVDQGSILLVVYGAFSEAVTEGLWHQIPLSALGGLLVVC HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH VVLLALALAVTMFVSKRLGFSRADQITIIFCGSKKSLAAGVPMAKVIFASHAVGAVVLPL HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHH MLFHQIQLMVCAALAQRWGARDTSGETRAASRERPAAAVARH HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]