| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781415
Identifier: 91781415
GI number: 91781415
Start: 39493
End: 40023
Strand: Direct
Name: 91781415
Synonym: Bxe_A4432
Alternate gene names: NA
Gene position: 39493-40023 (Clockwise)
Preceding gene: 91781413
Following gene: 91781416
Centisome position: 0.81
GC content: 60.45
Gene sequence:
>531_bases ATGGAACAAAGCGGCGGTGCGCCCAGCTCTCCGCGTCGTGCCGACAGCTATTTGCTGCCGACGCTATTTGATCGTCTGCG CGACGACGCACCGCATAGGCAGACCGAAGTGCCGGGCGAATATGCCGTCACGCGAACGCAGTTGCGCGACATCATCCAGC GCGATCTGGCCTATCTGTTGAACGCGACCAACCTGGGCGATCTGATCGACCCGCAGCGCTATCCACTGGTGGCGGCATCA ACCGTGAATTTCGGCGTGCCGCCTCTTGCTGGCGCCTTCATGGCCTCGCGCAAGTGGGCCGATATCGAAAAAACGATCAA GGACGCGATCGGGCGATTCGAGCCGCGGCTGATACCCGAGTCGCTTCGGGTGGTTCCACGCAGTGATAGTGATCGTCAGG GCCGTCACAGCCAGGTGGCCTTCGACATTCACGGAATGGTGCGCATGGAGCCGTATCCACTCGAATTCATGGTGCAAAGC TCGCTCGATCTCGAGTCGAGCCGCTTGCATGTCGACCTGAAGCGTATCTGA
Upstream 100 bases:
>100_bases AGGTTAGTTCTACTTTGTGTGTTTATGTATATCCCGGTTTCAACGCTATGGTCATTTATCCGAATCGCGAAGAGTCAGCG CAATGAATCGACATGTCACC
Downstream 100 bases:
>100_bases ACCAGCAACACTAACGGAGCTGAAGCGCTCGCATGGATCCGCGACTACTCGAATACTACAACCAGGAATTGATCTACCTG CGCGAGAGCGCGGGCGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpF; Type VI Secretion System Lysozyme-Related Family
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLLNATNLGDLIDPQRYPLVAAS TVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPESLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQS SLDLESSRLHVDLKRI
Sequences:
>Translated_176_residues MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLLNATNLGDLIDPQRYPLVAAS TVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPESLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQS SLDLESSRLHVDLKRI >Mature_176_residues MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLLNATNLGDLIDPQRYPLVAAS TVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPESLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQS SLDLESSRLHVDLKRI
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19898; Mature: 19898
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NATNLGDLIDPQRYPLVAASTVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPE CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCH SLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQSSLDLESSRLHVDLKRI HHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NATNLGDLIDPQRYPLVAASTVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPE CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCH SLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQSSLDLESSRLHVDLKRI HHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA