Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91781415

Identifier: 91781415

GI number: 91781415

Start: 39493

End: 40023

Strand: Direct

Name: 91781415

Synonym: Bxe_A4432

Alternate gene names: NA

Gene position: 39493-40023 (Clockwise)

Preceding gene: 91781413

Following gene: 91781416

Centisome position: 0.81

GC content: 60.45

Gene sequence:

>531_bases
ATGGAACAAAGCGGCGGTGCGCCCAGCTCTCCGCGTCGTGCCGACAGCTATTTGCTGCCGACGCTATTTGATCGTCTGCG
CGACGACGCACCGCATAGGCAGACCGAAGTGCCGGGCGAATATGCCGTCACGCGAACGCAGTTGCGCGACATCATCCAGC
GCGATCTGGCCTATCTGTTGAACGCGACCAACCTGGGCGATCTGATCGACCCGCAGCGCTATCCACTGGTGGCGGCATCA
ACCGTGAATTTCGGCGTGCCGCCTCTTGCTGGCGCCTTCATGGCCTCGCGCAAGTGGGCCGATATCGAAAAAACGATCAA
GGACGCGATCGGGCGATTCGAGCCGCGGCTGATACCCGAGTCGCTTCGGGTGGTTCCACGCAGTGATAGTGATCGTCAGG
GCCGTCACAGCCAGGTGGCCTTCGACATTCACGGAATGGTGCGCATGGAGCCGTATCCACTCGAATTCATGGTGCAAAGC
TCGCTCGATCTCGAGTCGAGCCGCTTGCATGTCGACCTGAAGCGTATCTGA

Upstream 100 bases:

>100_bases
AGGTTAGTTCTACTTTGTGTGTTTATGTATATCCCGGTTTCAACGCTATGGTCATTTATCCGAATCGCGAAGAGTCAGCG
CAATGAATCGACATGTCACC

Downstream 100 bases:

>100_bases
ACCAGCAACACTAACGGAGCTGAAGCGCTCGCATGGATCCGCGACTACTCGAATACTACAACCAGGAATTGATCTACCTG
CGCGAGAGCGCGGGCGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpF; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLLNATNLGDLIDPQRYPLVAAS
TVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPESLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQS
SLDLESSRLHVDLKRI

Sequences:

>Translated_176_residues
MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLLNATNLGDLIDPQRYPLVAAS
TVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPESLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQS
SLDLESSRLHVDLKRI
>Mature_176_residues
MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLLNATNLGDLIDPQRYPLVAAS
TVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPESLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQS
SLDLESSRLHVDLKRI

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19898; Mature: 19898

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLL
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NATNLGDLIDPQRYPLVAASTVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPE
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCH
SLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQSSLDLESSRLHVDLKRI
HHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MEQSGGAPSSPRRADSYLLPTLFDRLRDDAPHRQTEVPGEYAVTRTQLRDIIQRDLAYLL
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NATNLGDLIDPQRYPLVAASTVNFGVPPLAGAFMASRKWADIEKTIKDAIGRFEPRLIPE
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCH
SLRVVPRSDSDRQGRHSQVAFDIHGMVRMEPYPLEFMVQSSLDLESSRLHVDLKRI
HHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA