| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781416
Identifier: 91781416
GI number: 91781416
Start: 40056
End: 41948
Strand: Direct
Name: 91781416
Synonym: Bxe_A4431
Alternate gene names: NA
Gene position: 40056-41948 (Clockwise)
Preceding gene: 91781415
Following gene: 91781417
Centisome position: 0.82
GC content: 61.33
Gene sequence:
>1893_bases ATGGATCCGCGACTACTCGAATACTACAACCAGGAATTGATCTACCTGCGCGAGAGCGCGGGCGAGTTCGCTCAGGCGCA CCCGAAGATCGCGCGGCGCCTGGGCCTTCAGGCGGGTGAGATGACCGACCCCTACGTCGAGCGTCTGATCGAGTCGTTCT GCTTTATGGCCGCGCGCATGCGACTCAAGATCGACGCTGAGTTTCCGCGCTTCACGCAACGCCTGCTCGAAGTCACTTAC CCGAACTACGTTGCGCCCACGCCGTCGATGGCAGTGGCGCAGTTCTATCCGGCTCACACGAAAGGCGATCTGACCGGGGG CTTCCGTGTGCCGCGCGGCGGGAAGCTCAAGACAACCACGCCCCGTGGCGAGCATACGCCTTGCACGTTTCGTACAACGC AGGATGTCGTGCTATATCCGCTGGAAATCGTGAGTGCGCGGTTGACGGGCATTCCTCCCGACATTCCTGGAATCGAGCGC TATGTCCCCGCGCATTCGCAAGTGTGCGGTGCGCTGCGGCTACGCATTCGAACCACGAATCACGAAAAGATTGCCTCGCT CCGGAATCTGGATCGTCTGCCGGTCTATCTGGCGGGCGATGAGCAGGTTGCGTCGAACCTGTTCGAGCTCGTGCATACGG CGGGCATCGCGTCGATCGTCGGCGAGCCCAACGGGTTCAACGCGCCAGACCGTCCCTTTTCGGCAGTGACGTCGAAGGCC GTGGTGCACGAAGGCCTCGATCCCGATCAAGGCATGCTGCCGCTCATATGGTCCAAGTTTCACGGACACAATCTGCTGCA TGAGTATTTCGCGTGCCCGAGCCGCTTCTACTTCTTCACGCTTACCGGTCTTCAGGATGGCCTGGGAAAAACCCGCGGCG CAGAAGCCGAGATCGTAGTGCTGCTCGACCGTGCGCCGGATCGGCTCGCGAGCCTCGTCGATGCGTCACGCTTCGCGCTC TTCTGCACGCCGGTCATCAACCTGTTCCCGCAAAGGCTGGAACGTATCGAACTGGCGGAGGCGAGCACGGAGTTTCATCT GGTGCCCAAACGCCAGGCGCCACTCGACTATGAAGTGTTCTCGGTTCAGGCGCTGCACGCCCAGGTGGGAAATAGCTCGG AAAAGTTCGAATTCCGGCCGCTGTATCAGACGCTGAACAACGACGAAGGCAACCACGGCCGATACTTCTCCGTACGCCGC GAGCGCCGTTTGCCTTCGGATACATCGCGCCGCTATGGCACGCGTACGCCCTATATCGGCACGGAGACGTTCGTCTCGCT CGTCGATCAACGGGAGGCACCTTATCACGAAGGAATTCGCTATCTGTCCGCGGATGCGTGGCTGACCAACCGGGACCTGC CTCTGCTTGTGCCGCGCAACGGCATCGACGATTTCATGCAGATGGAAAGCGGCGAACCGATTGCGAGCATCGGCCTGATT CGCCCGCCGAGCGCGCCGCGGCCACCTTATGCGGAAGGCGAGACCGCATGGCGGTTGATCCGGCTGTTGAACTTCAACTA TTTGCCGCTTGAGGACGTCGATCATCGGCCGGGCGGCCAGGGTCTGCGCGACATGCTACGGCTCTTTCTGAGCAGCGAAG ACACGGAGCACGAGCGTCAGGTCGAGAGCCTGCTGGGCGTGAAGACCCGTTCCGTGACACGCAAGCTTCCGGGCAATGGT CCGCTCGTGTTCGGACGCGGCATTGAATGCCAGTTGACCGTCGATGAGACGGGGTTCTCGGGAACGAGTCCCTACCTGCT GGGGCTGATTCTCGAACATTATCTGGCGCGGCACGTATCGATCAATTCGTTCACGCAGACCGAACTGCATTCGATGCAGC GCGGCCGCATCACGCGCTGGCCCGTGCGCATGGGTACGCGAGGAGTGGCGTAA
Upstream 100 bases:
>100_bases AATTCATGGTGCAAAGCTCGCTCGATCTCGAGTCGAGCCGCTTGCATGTCGACCTGAAGCGTATCTGAACCAGCAACACT AACGGAGCTGAAGCGCTCGC
Downstream 100 bases:
>100_bases TGGGGCGTATGGCGTATACCCCGTTGCAGCGCGAGTCGGCACTCTCTGCGGAGATGATCGAAGGCCTGCGGACCGCGCCG CGTGGCGCTGCGTTGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MDPRLLEYYNQELIYLRESAGEFAQAHPKIARRLGLQAGEMTDPYVERLIESFCFMAARMRLKIDAEFPRFTQRLLEVTY PNYVAPTPSMAVAQFYPAHTKGDLTGGFRVPRGGKLKTTTPRGEHTPCTFRTTQDVVLYPLEIVSARLTGIPPDIPGIER YVPAHSQVCGALRLRIRTTNHEKIASLRNLDRLPVYLAGDEQVASNLFELVHTAGIASIVGEPNGFNAPDRPFSAVTSKA VVHEGLDPDQGMLPLIWSKFHGHNLLHEYFACPSRFYFFTLTGLQDGLGKTRGAEAEIVVLLDRAPDRLASLVDASRFAL FCTPVINLFPQRLERIELAEASTEFHLVPKRQAPLDYEVFSVQALHAQVGNSSEKFEFRPLYQTLNNDEGNHGRYFSVRR ERRLPSDTSRRYGTRTPYIGTETFVSLVDQREAPYHEGIRYLSADAWLTNRDLPLLVPRNGIDDFMQMESGEPIASIGLI RPPSAPRPPYAEGETAWRLIRLLNFNYLPLEDVDHRPGGQGLRDMLRLFLSSEDTEHERQVESLLGVKTRSVTRKLPGNG PLVFGRGIECQLTVDETGFSGTSPYLLGLILEHYLARHVSINSFTQTELHSMQRGRITRWPVRMGTRGVA
Sequences:
>Translated_630_residues MDPRLLEYYNQELIYLRESAGEFAQAHPKIARRLGLQAGEMTDPYVERLIESFCFMAARMRLKIDAEFPRFTQRLLEVTY PNYVAPTPSMAVAQFYPAHTKGDLTGGFRVPRGGKLKTTTPRGEHTPCTFRTTQDVVLYPLEIVSARLTGIPPDIPGIER YVPAHSQVCGALRLRIRTTNHEKIASLRNLDRLPVYLAGDEQVASNLFELVHTAGIASIVGEPNGFNAPDRPFSAVTSKA VVHEGLDPDQGMLPLIWSKFHGHNLLHEYFACPSRFYFFTLTGLQDGLGKTRGAEAEIVVLLDRAPDRLASLVDASRFAL FCTPVINLFPQRLERIELAEASTEFHLVPKRQAPLDYEVFSVQALHAQVGNSSEKFEFRPLYQTLNNDEGNHGRYFSVRR ERRLPSDTSRRYGTRTPYIGTETFVSLVDQREAPYHEGIRYLSADAWLTNRDLPLLVPRNGIDDFMQMESGEPIASIGLI RPPSAPRPPYAEGETAWRLIRLLNFNYLPLEDVDHRPGGQGLRDMLRLFLSSEDTEHERQVESLLGVKTRSVTRKLPGNG PLVFGRGIECQLTVDETGFSGTSPYLLGLILEHYLARHVSINSFTQTELHSMQRGRITRWPVRMGTRGVA >Mature_630_residues MDPRLLEYYNQELIYLRESAGEFAQAHPKIARRLGLQAGEMTDPYVERLIESFCFMAARMRLKIDAEFPRFTQRLLEVTY PNYVAPTPSMAVAQFYPAHTKGDLTGGFRVPRGGKLKTTTPRGEHTPCTFRTTQDVVLYPLEIVSARLTGIPPDIPGIER YVPAHSQVCGALRLRIRTTNHEKIASLRNLDRLPVYLAGDEQVASNLFELVHTAGIASIVGEPNGFNAPDRPFSAVTSKA VVHEGLDPDQGMLPLIWSKFHGHNLLHEYFACPSRFYFFTLTGLQDGLGKTRGAEAEIVVLLDRAPDRLASLVDASRFAL FCTPVINLFPQRLERIELAEASTEFHLVPKRQAPLDYEVFSVQALHAQVGNSSEKFEFRPLYQTLNNDEGNHGRYFSVRR ERRLPSDTSRRYGTRTPYIGTETFVSLVDQREAPYHEGIRYLSADAWLTNRDLPLLVPRNGIDDFMQMESGEPIASIGLI RPPSAPRPPYAEGETAWRLIRLLNFNYLPLEDVDHRPGGQGLRDMLRLFLSSEDTEHERQVESLLGVKTRSVTRKLPGNG PLVFGRGIECQLTVDETGFSGTSPYLLGLILEHYLARHVSINSFTQTELHSMQRGRITRWPVRMGTRGVA
Specific function: Unknown
COG id: COG3519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71087; Mature: 71087
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRLLEYYNQELIYLRESAGEFAQAHPKIARRLGLQAGEMTDPYVERLIESFCFMAARM CCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RLKIDAEFPRFTQRLLEVTYPNYVAPTPSMAVAQFYPAHTKGDLTGGFRVPRGGKLKTTT EEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCEEEECC PRGEHTPCTFRTTQDVVLYPLEIVSARLTGIPPDIPGIERYVPAHSQVCGALRLRIRTTN CCCCCCCEEEECCCCEEEEHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECC HEKIASLRNLDRLPVYLAGDEQVASNLFELVHTAGIASIVGEPNGFNAPDRPFSAVTSKA HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VVHEGLDPDQGMLPLIWSKFHGHNLLHEYFACPSRFYFFTLTGLQDGLGKTRGAEAEIVV HHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEEE LLDRAPDRLASLVDASRFALFCTPVINLFPQRLERIELAEASTEFHLVPKRQAPLDYEVF EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH SVQALHAQVGNSSEKFEFRPLYQTLNNDEGNHGRYFSVRRERRLPSDTSRRYGTRTPYIG HHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCCCCEEEEHHHHCCCCCHHHCCCCCCCCCC TETFVSLVDQREAPYHEGIRYLSADAWLTNRDLPLLVPRNGIDDFMQMESGEPIASIGLI HHHHHHHHHHCCCCHHHHHHHEECCCEEECCCCEEEECCCCHHHHHHHCCCCCHHHCCEE RPPSAPRPPYAEGETAWRLIRLLNFNYLPLEDVDHRPGGQGLRDMLRLFLSSEDTEHERQ CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH VESLLGVKTRSVTRKLPGNGPLVFGRGIECQLTVDETGFSGTSPYLLGLILEHYLARHVS HHHHHCCHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC INSFTQTELHSMQRGRITRWPVRMGTRGVA CCCCHHHHHHHHHCCCCEECCHHCCCCCCC >Mature Secondary Structure MDPRLLEYYNQELIYLRESAGEFAQAHPKIARRLGLQAGEMTDPYVERLIESFCFMAARM CCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH RLKIDAEFPRFTQRLLEVTYPNYVAPTPSMAVAQFYPAHTKGDLTGGFRVPRGGKLKTTT EEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCEEEECC PRGEHTPCTFRTTQDVVLYPLEIVSARLTGIPPDIPGIERYVPAHSQVCGALRLRIRTTN CCCCCCCEEEECCCCEEEEHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHEEEEEEECC HEKIASLRNLDRLPVYLAGDEQVASNLFELVHTAGIASIVGEPNGFNAPDRPFSAVTSKA HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VVHEGLDPDQGMLPLIWSKFHGHNLLHEYFACPSRFYFFTLTGLQDGLGKTRGAEAEIVV HHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEEE LLDRAPDRLASLVDASRFALFCTPVINLFPQRLERIELAEASTEFHLVPKRQAPLDYEVF EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH SVQALHAQVGNSSEKFEFRPLYQTLNNDEGNHGRYFSVRRERRLPSDTSRRYGTRTPYIG HHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCCCCEEEEHHHHCCCCCHHHCCCCCCCCCC TETFVSLVDQREAPYHEGIRYLSADAWLTNRDLPLLVPRNGIDDFMQMESGEPIASIGLI HHHHHHHHHHCCCCHHHHHHHEECCCEEECCCCEEEECCCCHHHHHHHCCCCCHHHCCEE RPPSAPRPPYAEGETAWRLIRLLNFNYLPLEDVDHRPGGQGLRDMLRLFLSSEDTEHERQ CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH VESLLGVKTRSVTRKLPGNGPLVFGRGIECQLTVDETGFSGTSPYLLGLILEHYLARHVS HHHHHCCHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC INSFTQTELHSMQRGRITRWPVRMGTRGVA CCCCHHHHHHHHHCCCCEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA