| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790206
Identifier: 91790206
GI number: 91790206
Start: 4613194
End: 4614369
Strand: Reverse
Name: 91790206
Synonym: Bpro_4371
Alternate gene names: NA
Gene position: 4614369-4613194 (Counterclockwise)
Preceding gene: 91790207
Following gene: 91790205
Centisome position: 88.73
GC content: 62.33
Gene sequence:
>1176_bases GTGGGGTTTAACGTACTACTGGGGTCGTCGATGAACCACATCAAGCTGGCAATGCCACTCATCCTGGCCTGCGCCGCACT GGCCGCTGCCCAACCGGCGCGAGCCGCGCAAATCGTCATCGGCCAGGTCGCGCCACTTTCCGGGCCTGAGGCCAGCCAGG GGCGTGCCTACGCCGCGGGCATGCAATTGCTCTTCAACGGCGTCAACAAGTCCGGCGGTGTCAATGGCCATACCTTCGCA TTGGTGAGCAAGGATGACGGCGGCCGCCCCGAATACACCGTCAGGCTCACCCGGAAAATGCTCTCCGAAGAGCAACCGGC AGTGCTTGCGGGATACCTCGGCAATCGGAATGTCTCCGAACTGGTGAGTGCGGGAGTCCTGGAGAAGGAGAGAGTCGCCT TGGTGGGCTACCGCGCCGCCGATGTCCGCCCTGACACCCCTTTGCTGTACAACGTTCGCGCCAGCCTGCGGGATGAGCTC GGCAAGATCACTGAGCACCTGGCGACGATCGGGGTGACAAGCCTGGCGTTGCTTTACGAGGAGGGCCCTGGCGCCGCCGC GCTGATCGCGGCAACCGAAGAGGCCACCGGGAAAAGCGAGGCCACTGTCGTTTCGAAAGTTTCCTATGAAGCAGGCACGA CTCGCGTCTCCGACGCGATCGACAGTTTCATCAAGGTCAGGCCCCAGGCGATCATTCTGGTGTGCAGTGGGGTGGCTGGC GCGCGCTCTATTGAGCAATACCGCGCGAACGGGGGCGGCGCGCAAATTTTTGTGTATTCGGGCGCCGACATGGAGCGTGT GGCGAAGCGGATCGCGGAAGATCGCCTGTCCTTCGTCTCCACCGTGATGCGAGGGGTGGCAATTTCGCATGTCGTGCCGA ATCCGTACGATGTATCCAGGCTGGCTAAAGAACTTAACGAAGCGGCCAAAGGTGGAAAACCCGATGTGCCGGTGAGCTAC GTCATGATGGAAGGCTACATCGCAGCGAAGGTCATTGTCGAAGCCGTGCGGCGCCAGGGCCAGCGGCCGACCCGCGAAGG CATGGCTGCGGCGCTGGAGAGCATCGATAACCTCAACCTGGCCGGGTATGTGGTCGGCTTCAAGCCTGGCATGCGCAGCG GCTCGAGGTTCGTGGCGCTTTCCATCATCAGCGACACCGGCAAGATCCGGCAATGA
Upstream 100 bases:
>100_bases CTGCTTGTGGAAATCATCGTCACGGCGGCGTTGTAAGCAACCCTTGCGTCGGGCCTCTTCCCACACTTGCGCGAGTGCGT GGCGTGGCAAATGTTCCACC
Downstream 100 bases:
>100_bases GCGAACTTCCGGTAGCGCTTGCCGATAGCCGTATCGCGGGTTTCCCCGCTCCGTCGGGGAATTGACCCCTAGCGACATGC CAATTGACGATGCCGACGGG
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: Lipoprotein; Abc-Type Branched-Chain Amino Acid Transport Systems; Serine/Threonine Protein Kinase; ABC Branched-Chain Amino Acid Transporter; Branched-Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MGFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAGMQLLFNGVNKSGGVNGHTFA LVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSELVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDEL GKITEHLATIGVTSLALLYEEGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSRLAKELNEAAKGGKPDVPVSY VMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNLAGYVVGFKPGMRSGSRFVALSIISDTGKIRQ
Sequences:
>Translated_391_residues MGFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAGMQLLFNGVNKSGGVNGHTFA LVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSELVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDEL GKITEHLATIGVTSLALLYEEGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSRLAKELNEAAKGGKPDVPVSY VMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNLAGYVVGFKPGMRSGSRFVALSIISDTGKIRQ >Mature_390_residues GFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAGMQLLFNGVNKSGGVNGHTFAL VSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSELVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDELG KITEHLATIGVTSLALLYEEGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAGA RSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSRLAKELNEAAKGGKPDVPVSYV MMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNLAGYVVGFKPGMRSGSRFVALSIISDTGKIRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41247; Mature: 41116
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAG CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCHHHHH MQLLFNGVNKSGGVNGHTFALVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSE HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHH LVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDELGKITEHLATIGVTSLALLYE HHHHCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE EGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG CCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSR HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LAKELNEAAKGGKPDVPVSYVMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE AGYVVGFKPGMRSGSRFVALSIISDTGKIRQ EEEEEEECCCCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure GFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAG CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCHHHHH MQLLFNGVNKSGGVNGHTFALVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSE HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHH LVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDELGKITEHLATIGVTSLALLYE HHHHCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE EGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG CCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSR HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LAKELNEAAKGGKPDVPVSYVMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE AGYVVGFKPGMRSGSRFVALSIISDTGKIRQ EEEEEEECCCCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA