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The map label for this gene is yoaB [C]

Identifier: 91790207

GI number: 91790207

Start: 4614434

End: 4614787

Strand: Reverse

Name: yoaB [C]

Synonym: Bpro_4372

Alternate gene names: 91790207

Gene position: 4614787-4614434 (Counterclockwise)

Preceding gene: 91790208

Following gene: 91790206

Centisome position: 88.74

GC content: 60.17

Gene sequence:

>354_bases
ATGTCTGACATCCAGCGCTACGAATCCACGCCCCGCCTGTCCCGCGTCGTCGTGCACAACGGCATCGTTCATCTCGCCGG
CATCACCTCCGCTGTGCGTGACGGCGACATCATCGTGCAGACAAAAAGTGTGCTCGATACCATAGCCGCACGCCTGGCCA
GCGTCGGCAGCAGCAAGGAAAAAATCCTGAGCGCACAGATCTGGCTCAAGGACATCGATCGCGATTTCGCCGGCCTGAAC
ACTGTCTGGGAAGCCTGGGTTCCTGCCGATGCGGTGCCGACACGTGCTACCTGCGAAGCCAAGCTCGCTGCACCGGAACT
GCTTGTGGAAATCATCGTCACGGCGGCGTTGTAA

Upstream 100 bases:

>100_bases
CGTTTGCCGTGGACCGGTTCGCCCCGGCCGCCGTGCATTGACCGGCCCGCTCCTTGCCTTCCCTTTTTCCTTCTCACCAA
CCACACAGAAAGACCACTCA

Downstream 100 bases:

>100_bases
GCAACCCTTGCGTCGGGCCTCTTCCCACACTTGCGCGAGTGCGTGGCGTGGCAAATGTTCCACCGTGGGGTTTAACGTAC
TACTGGGGTCGTCGATGAAC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSDIQRYESTPRLSRVVVHNGIVHLAGITSAVRDGDIIVQTKSVLDTIAARLASVGSSKEKILSAQIWLKDIDRDFAGLN
TVWEAWVPADAVPTRATCEAKLAAPELLVEIIVTAAL

Sequences:

>Translated_117_residues
MSDIQRYESTPRLSRVVVHNGIVHLAGITSAVRDGDIIVQTKSVLDTIAARLASVGSSKEKILSAQIWLKDIDRDFAGLN
TVWEAWVPADAVPTRATCEAKLAAPELLVEIIVTAAL
>Mature_116_residues
SDIQRYESTPRLSRVVVHNGIVHLAGITSAVRDGDIIVQTKSVLDTIAARLASVGSSKEKILSAQIWLKDIDRDFAGLNT
VWEAWVPADAVPTRATCEAKLAAPELLVEIIVTAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=40.3508771929825, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12620; Mature: 12488

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIQRYESTPRLSRVVVHNGIVHLAGITSAVRDGDIIVQTKSVLDTIAARLASVGSSKE
CCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCHH
KILSAQIWLKDIDRDFAGLNTVWEAWVPADAVPTRATCEAKLAAPELLVEIIVTAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDIQRYESTPRLSRVVVHNGIVHLAGITSAVRDGDIIVQTKSVLDTIAARLASVGSSKE
CCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCHH
KILSAQIWLKDIDRDFAGLNTVWEAWVPADAVPTRATCEAKLAAPELLVEIIVTAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]