| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is glsA [H]
Identifier: 91790205
GI number: 91790205
Start: 4612224
End: 4613117
Strand: Reverse
Name: glsA [H]
Synonym: Bpro_4370
Alternate gene names: 91790205
Gene position: 4613117-4612224 (Counterclockwise)
Preceding gene: 91790206
Following gene: 91790203
Centisome position: 88.71
GC content: 56.82
Gene sequence:
>894_bases ATGCCAATTGACGATGCCGACGGGCTCCTGGCCCACATTGCCGCGCAAGTGCGGCCCCTTCTGCCACAGGGCCAGTTGCC CCAATACATTCCACAACTGGGAAGGGTGGACAAGATGCAGTTCGGCATGGCGCTGCTCATGCTGGACGGCCGGGAAGCAT TCGTCGGAGACGCTGATGTGCCGTTTTCGATTCAAAGTATTTCCAAATTGTTCGCCCTCATGCTGGCTCTCGAACGGGTG CAGGTGGATCAGGAGGCAGGTGCCACGCGCAACCCGTTCATCAATGCGGGCGCGCTTGTCGTCACCGATGTGCTTTGCTC TAGTTTTGCGCAACCTGAACTCGCACTACTCCAAACTTTGAGACAAAGCGCAGATGATGAGCGGGTAGACATTGATCAAA TAGTCATGCGCTCGGAACGCGAGAGCTGCCACCGCAACGCCGCCATTGCCCACCTACTTAAAAGCTACGGCCGCATCTGC AACTCAGTCGATACGGTGCTGGATACCTATTGTCGGCAGTGCGCACTAACCATGAATACCCGCCAGATTGCCCGGTGTGC ATTGCCATTGGCAATTAGCGGAAGGCTTTCAGCTCATCGCGCACGCGAAAGGCTATCAGCAGTGCAACGCCATAGCGTGA CTGCGTTGATGCTCACATGCGGAACATACAACGCTGCAGGCGATTTTGCCGCGCGCGTTGGATTGCCTATGAAAAGCGGC GTGGGGGGAGGCATTGTCGCGGTCATTCCCGGGGTTGGCAGTGTGTGTGCGTGGTCGCCCGGTCTCGACGGTGCTGGCAA TAGCTTGGCCGCCGGACGTGCAATTGAACTATTTGCAAAACATACAGGTTTGTCGGTACTGGGATCACCCGCAAGAACCT TTAAGGCGCTGTGA
Upstream 100 bases:
>100_bases GACACCGGCAAGATCCGGCAATGAGCGAACTTCCGGTAGCGCTTGCCGATAGCCGTATCGCGGGTTTCCCCGCTCCGTCG GGGAATTGACCCCTAGCGAC
Downstream 100 bases:
>100_bases CAAGCGTTTAGCCTGGATTCAAAACTAATAAGGTACGGCCTACCCGGGTTAGATTTCGACGGAATTCAACATGCGGTCTT CGGGACAAACCTGTGGCGTA
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPIDDADGLLAHIAAQVRPLLPQGQLPQYIPQLGRVDKMQFGMALLMLDGREAFVGDADVPFSIQSISKLFALMLALERV QVDQEAGATRNPFINAGALVVTDVLCSSFAQPELALLQTLRQSADDERVDIDQIVMRSERESCHRNAAIAHLLKSYGRIC NSVDTVLDTYCRQCALTMNTRQIARCALPLAISGRLSAHRARERLSAVQRHSVTALMLTCGTYNAAGDFAARVGLPMKSG VGGGIVAVIPGVGSVCAWSPGLDGAGNSLAAGRAIELFAKHTGLSVLGSPARTFKAL
Sequences:
>Translated_297_residues MPIDDADGLLAHIAAQVRPLLPQGQLPQYIPQLGRVDKMQFGMALLMLDGREAFVGDADVPFSIQSISKLFALMLALERV QVDQEAGATRNPFINAGALVVTDVLCSSFAQPELALLQTLRQSADDERVDIDQIVMRSERESCHRNAAIAHLLKSYGRIC NSVDTVLDTYCRQCALTMNTRQIARCALPLAISGRLSAHRARERLSAVQRHSVTALMLTCGTYNAAGDFAARVGLPMKSG VGGGIVAVIPGVGSVCAWSPGLDGAGNSLAAGRAIELFAKHTGLSVLGSPARTFKAL >Mature_296_residues PIDDADGLLAHIAAQVRPLLPQGQLPQYIPQLGRVDKMQFGMALLMLDGREAFVGDADVPFSIQSISKLFALMLALERVQ VDQEAGATRNPFINAGALVVTDVLCSSFAQPELALLQTLRQSADDERVDIDQIVMRSERESCHRNAAIAHLLKSYGRICN SVDTVLDTYCRQCALTMNTRQIARCALPLAISGRLSAHRARERLSAVQRHSVTALMLTCGTYNAAGDFAARVGLPMKSGV GGGIVAVIPGVGSVCAWSPGLDGAGNSLAAGRAIELFAKHTGLSVLGSPARTFKAL
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=270, Percent_Identity=32.2222222222222, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI20336214, Length=273, Percent_Identity=30.7692307692308, Blast_Score=119, Evalue=3e-27, Organism=Escherichia coli, GI1787804, Length=302, Percent_Identity=42.0529801324503, Blast_Score=217, Evalue=7e-58, Organism=Escherichia coli, GI1786693, Length=290, Percent_Identity=33.448275862069, Blast_Score=138, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17532727, Length=271, Percent_Identity=30.6273062730627, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17507019, Length=307, Percent_Identity=31.9218241042345, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI193204073, Length=275, Percent_Identity=31.2727272727273, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI193204075, Length=277, Percent_Identity=31.0469314079422, Blast_Score=120, Evalue=9e-28, Organism=Drosophila melanogaster, GI281363241, Length=276, Percent_Identity=32.6086956521739, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24653164, Length=276, Percent_Identity=32.6086956521739, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24653162, Length=276, Percent_Identity=32.6086956521739, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI24653156, Length=276, Percent_Identity=32.6086956521739, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI281363239, Length=276, Percent_Identity=32.6086956521739, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI24653158, Length=276, Percent_Identity=32.6086956521739, Blast_Score=138, Evalue=5e-33, Organism=Drosophila melanogaster, GI24653166, Length=276, Percent_Identity=32.6086956521739, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI116008307, Length=276, Percent_Identity=32.6086956521739, Blast_Score=137, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 31622; Mature: 31491
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDDADGLLAHIAAQVRPLLPQGQLPQYIPQLGRVDKMQFGMALLMLDGREAFVGDADV CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHCEEEEEECCCHHCCCCCCC PFSIQSISKLFALMLALERVQVDQEAGATRNPFINAGALVVTDVLCSSFAQPELALLQTL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH RQSADDERVDIDQIVMRSERESCHRNAAIAHLLKSYGRICNSVDTVLDTYCRQCALTMNT HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RQIARCALPLAISGRLSAHRARERLSAVQRHSVTALMLTCGTYNAAGDFAARVGLPMKSG HHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCHHCC VGGGIVAVIPGVGSVCAWSPGLDGAGNSLAAGRAIELFAKHTGLSVLGSPARTFKAL CCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHCCC >Mature Secondary Structure PIDDADGLLAHIAAQVRPLLPQGQLPQYIPQLGRVDKMQFGMALLMLDGREAFVGDADV CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHCEEEEEECCCHHCCCCCCC PFSIQSISKLFALMLALERVQVDQEAGATRNPFINAGALVVTDVLCSSFAQPELALLQTL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH RQSADDERVDIDQIVMRSERESCHRNAAIAHLLKSYGRICNSVDTVLDTYCRQCALTMNT HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RQIARCALPLAISGRLSAHRARERLSAVQRHSVTALMLTCGTYNAAGDFAARVGLPMKSG HHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCHHCC VGGGIVAVIPGVGSVCAWSPGLDGAGNSLAAGRAIELFAKHTGLSVLGSPARTFKAL CCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]