Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790206

Identifier: 91790206

GI number: 91790206

Start: 4613194

End: 4614369

Strand: Reverse

Name: 91790206

Synonym: Bpro_4371

Alternate gene names: NA

Gene position: 4614369-4613194 (Counterclockwise)

Preceding gene: 91790207

Following gene: 91790205

Centisome position: 88.73

GC content: 62.33

Gene sequence:

>1176_bases
GTGGGGTTTAACGTACTACTGGGGTCGTCGATGAACCACATCAAGCTGGCAATGCCACTCATCCTGGCCTGCGCCGCACT
GGCCGCTGCCCAACCGGCGCGAGCCGCGCAAATCGTCATCGGCCAGGTCGCGCCACTTTCCGGGCCTGAGGCCAGCCAGG
GGCGTGCCTACGCCGCGGGCATGCAATTGCTCTTCAACGGCGTCAACAAGTCCGGCGGTGTCAATGGCCATACCTTCGCA
TTGGTGAGCAAGGATGACGGCGGCCGCCCCGAATACACCGTCAGGCTCACCCGGAAAATGCTCTCCGAAGAGCAACCGGC
AGTGCTTGCGGGATACCTCGGCAATCGGAATGTCTCCGAACTGGTGAGTGCGGGAGTCCTGGAGAAGGAGAGAGTCGCCT
TGGTGGGCTACCGCGCCGCCGATGTCCGCCCTGACACCCCTTTGCTGTACAACGTTCGCGCCAGCCTGCGGGATGAGCTC
GGCAAGATCACTGAGCACCTGGCGACGATCGGGGTGACAAGCCTGGCGTTGCTTTACGAGGAGGGCCCTGGCGCCGCCGC
GCTGATCGCGGCAACCGAAGAGGCCACCGGGAAAAGCGAGGCCACTGTCGTTTCGAAAGTTTCCTATGAAGCAGGCACGA
CTCGCGTCTCCGACGCGATCGACAGTTTCATCAAGGTCAGGCCCCAGGCGATCATTCTGGTGTGCAGTGGGGTGGCTGGC
GCGCGCTCTATTGAGCAATACCGCGCGAACGGGGGCGGCGCGCAAATTTTTGTGTATTCGGGCGCCGACATGGAGCGTGT
GGCGAAGCGGATCGCGGAAGATCGCCTGTCCTTCGTCTCCACCGTGATGCGAGGGGTGGCAATTTCGCATGTCGTGCCGA
ATCCGTACGATGTATCCAGGCTGGCTAAAGAACTTAACGAAGCGGCCAAAGGTGGAAAACCCGATGTGCCGGTGAGCTAC
GTCATGATGGAAGGCTACATCGCAGCGAAGGTCATTGTCGAAGCCGTGCGGCGCCAGGGCCAGCGGCCGACCCGCGAAGG
CATGGCTGCGGCGCTGGAGAGCATCGATAACCTCAACCTGGCCGGGTATGTGGTCGGCTTCAAGCCTGGCATGCGCAGCG
GCTCGAGGTTCGTGGCGCTTTCCATCATCAGCGACACCGGCAAGATCCGGCAATGA

Upstream 100 bases:

>100_bases
CTGCTTGTGGAAATCATCGTCACGGCGGCGTTGTAAGCAACCCTTGCGTCGGGCCTCTTCCCACACTTGCGCGAGTGCGT
GGCGTGGCAAATGTTCCACC

Downstream 100 bases:

>100_bases
GCGAACTTCCGGTAGCGCTTGCCGATAGCCGTATCGCGGGTTTCCCCGCTCCGTCGGGGAATTGACCCCTAGCGACATGC
CAATTGACGATGCCGACGGG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Lipoprotein; Abc-Type Branched-Chain Amino Acid Transport Systems; Serine/Threonine Protein Kinase; ABC Branched-Chain Amino Acid Transporter; Branched-Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MGFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAGMQLLFNGVNKSGGVNGHTFA
LVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSELVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDEL
GKITEHLATIGVTSLALLYEEGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG
ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSRLAKELNEAAKGGKPDVPVSY
VMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNLAGYVVGFKPGMRSGSRFVALSIISDTGKIRQ

Sequences:

>Translated_391_residues
MGFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAGMQLLFNGVNKSGGVNGHTFA
LVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSELVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDEL
GKITEHLATIGVTSLALLYEEGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG
ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSRLAKELNEAAKGGKPDVPVSY
VMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNLAGYVVGFKPGMRSGSRFVALSIISDTGKIRQ
>Mature_390_residues
GFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAGMQLLFNGVNKSGGVNGHTFAL
VSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSELVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDELG
KITEHLATIGVTSLALLYEEGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAGA
RSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSRLAKELNEAAKGGKPDVPVSYV
MMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNLAGYVVGFKPGMRSGSRFVALSIISDTGKIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41247; Mature: 41116

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAG
CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCHHHHH
MQLLFNGVNKSGGVNGHTFALVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSE
HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHH
LVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDELGKITEHLATIGVTSLALLYE
HHHHCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
EGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG
CCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSR
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LAKELNEAAKGGKPDVPVSYVMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
AGYVVGFKPGMRSGSRFVALSIISDTGKIRQ
EEEEEEECCCCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
GFNVLLGSSMNHIKLAMPLILACAALAAAQPARAAQIVIGQVAPLSGPEASQGRAYAAG
CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCHHHHH
MQLLFNGVNKSGGVNGHTFALVSKDDGGRPEYTVRLTRKMLSEEQPAVLAGYLGNRNVSE
HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHH
LVSAGVLEKERVALVGYRAADVRPDTPLLYNVRASLRDELGKITEHLATIGVTSLALLYE
HHHHCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
EGPGAAALIAATEEATGKSEATVVSKVSYEAGTTRVSDAIDSFIKVRPQAIILVCSGVAG
CCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
ARSIEQYRANGGGAQIFVYSGADMERVAKRIAEDRLSFVSTVMRGVAISHVVPNPYDVSR
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LAKELNEAAKGGKPDVPVSYVMMEGYIAAKVIVEAVRRQGQRPTREGMAAALESIDNLNL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
AGYVVGFKPGMRSGSRFVALSIISDTGKIRQ
EEEEEEECCCCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA