| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pheC [H]
Identifier: 91790052
GI number: 91790052
Start: 4432927
End: 4433748
Strand: Direct
Name: pheC [H]
Synonym: Bpro_4214
Alternate gene names: 91790052
Gene position: 4432927-4433748 (Clockwise)
Preceding gene: 91790051
Following gene: 91790053
Centisome position: 85.24
GC content: 63.38
Gene sequence:
>822_bases ATGTCATTTCGTCAGAAACTGCAGCCCCGCCTGGTCGCACTCGGCCTTGTTTCGGCCGCGTCCTTCGTCATGCTTTCCGG CGCCTCGGCGCAGACTGCTGCTGCCAGCGTGCCGCCGGCTTCCAGCCTGGATGCCGTGCAAAAGGCGGGGGTGCTGCGCA TCTGCACGCCGGGCGACTACAAGCCCTTCAGCTTCCAGAAGCCTGATGGCGCCTTTGAGGGCATTGACGTGGACCTGATG GCCTCGCTGACGGCCAGCCTGGGCGTGAAGCCCGAGTGGGTCAAGACCAGCTGGTCCAACCTCATGCCCGACATGGTGGC CGGCAAGTGCGACCTGGCCGTCGGCGGGATCTCGGTGACCACCGAGCGGCAAAAGAAAGCCTTCTTCAGCACCGCCTACA TGGTCAACGGCAAGACGCCGATTGCCCGCTGCGCCGATGTTGCCAAATACCAGACGGTGGCCGACATCGACAAGCCGGCG ACGCGCGTGATCTTCAACCCCGGCGGCAGCAATGAGCGCTTTGCCCGCGCCAACTTCAAGCAGGCGCAGATGCGGCTGAA CCCCGAGAACCTGACGATTTTTGACGAAATCCTGGCCAACCGCGCGGATGTGTTCGTCACGGAATCGGCCGAAGCCATCA CCCAGCAACGGCTCAAGCCCGGGCTGTGCGCCATCAACCCCGACAAGCCCCTGCAATACGGCGAAATGGCCTATCTGCTG CCGCGTGGCGATGTGACCTTCAAGGCCTATGTAGACCAGTGGCTGCACCTGGCCAAGGCCAGCGGCGAGTACCAGCGGGT GGAAGGACAATGGCTGAAGTAG
Upstream 100 bases:
>100_bases AGGCACTGTTCGAAAGCATCGAGCTGGACCAGATGCGCCGAGGGGTTTTGGCGAGTGCACAATAAAGTCCGTCCATTTAC CCACCCTCCCGGAGATTGCC
Downstream 100 bases:
>100_bases CAGGCGGCGCCCCCGAACCGGTGGTGTACGGTCAATCCGACCGGCCACCGCGGGGCGACTATTCACGCGGCGGCCAGGTC AGGGCCGACTACACCTGCCC
Product: cyclohexadienyl dehydratase
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSFRQKLQPRLVALGLVSAASFVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDYKPFSFQKPDGAFEGIDVDLM ASLTASLGVKPEWVKTSWSNLMPDMVAGKCDLAVGGISVTTERQKKAFFSTAYMVNGKTPIARCADVAKYQTVADIDKPA TRVIFNPGGSNERFARANFKQAQMRLNPENLTIFDEILANRADVFVTESAEAITQQRLKPGLCAINPDKPLQYGEMAYLL PRGDVTFKAYVDQWLHLAKASGEYQRVEGQWLK
Sequences:
>Translated_273_residues MSFRQKLQPRLVALGLVSAASFVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDYKPFSFQKPDGAFEGIDVDLM ASLTASLGVKPEWVKTSWSNLMPDMVAGKCDLAVGGISVTTERQKKAFFSTAYMVNGKTPIARCADVAKYQTVADIDKPA TRVIFNPGGSNERFARANFKQAQMRLNPENLTIFDEILANRADVFVTESAEAITQQRLKPGLCAINPDKPLQYGEMAYLL PRGDVTFKAYVDQWLHLAKASGEYQRVEGQWLK >Mature_272_residues SFRQKLQPRLVALGLVSAASFVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDYKPFSFQKPDGAFEGIDVDLMA SLTASLGVKPEWVKTSWSNLMPDMVAGKCDLAVGGISVTTERQKKAFFSTAYMVNGKTPIARCADVAKYQTVADIDKPAT RVIFNPGGSNERFARANFKQAQMRLNPENLTIFDEILANRADVFVTESAEAITQQRLKPGLCAINPDKPLQYGEMAYLLP RGDVTFKAYVDQWLHLAKASGEYQRVEGQWLK
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=207, Percent_Identity=24.1545893719807, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=24.8995983935743, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 29718; Mature: 29587
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRQKLQPRLVALGLVSAASFVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDY CCHHHHHCHHHHHHHHHHHHHHHEECCCCCCCHHCCCCCCCHHHHHHHCCEEEEECCCCC KPFSFQKPDGAFEGIDVDLMASLTASLGVKPEWVKTSWSNLMPDMVAGKCDLAVGGISVT CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHCCHHHHCCCCCEEECCEEEE TERQKKAFFSTAYMVNGKTPIARCADVAKYQTVADIDKPATRVIFNPGGSNERFARANFK CHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCHH QAQMRLNPENLTIFDEILANRADVFVTESAEAITQQRLKPGLCAINPDKPLQYGEMAYLL HHHEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEE PRGDVTFKAYVDQWLHLAKASGEYQRVEGQWLK CCCCEEHHHHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure SFRQKLQPRLVALGLVSAASFVMLSGASAQTAAASVPPASSLDAVQKAGVLRICTPGDY CHHHHHCHHHHHHHHHHHHHHHEECCCCCCCHHCCCCCCCHHHHHHHCCEEEEECCCCC KPFSFQKPDGAFEGIDVDLMASLTASLGVKPEWVKTSWSNLMPDMVAGKCDLAVGGISVT CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHCCHHHHCCCCCEEECCEEEE TERQKKAFFSTAYMVNGKTPIARCADVAKYQTVADIDKPATRVIFNPGGSNERFARANFK CHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCHH QAQMRLNPENLTIFDEILANRADVFVTESAEAITQQRLKPGLCAINPDKPLQYGEMAYLL HHHEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEE PRGDVTFKAYVDQWLHLAKASGEYQRVEGQWLK CCCCEEHHHHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]