| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yeaE [H]
Identifier: 91789894
GI number: 91789894
Start: 4260754
End: 4261596
Strand: Reverse
Name: yeaE [H]
Synonym: Bpro_4055
Alternate gene names: 91789894
Gene position: 4261596-4260754 (Counterclockwise)
Preceding gene: 91789896
Following gene: 91789888
Centisome position: 81.95
GC content: 65.36
Gene sequence:
>843_bases ATGGCTGTCATGAAAAGCGTATTGCTGCCTTGTGGCGAAGCCGTGCCGGCATTGGGAATGGGTACCTGGTGCATGGGGGA GACACTTGGGCGGCGAGCCCAGGAGCTCGCCACGCTCAGGCGGGGCCTTGATTTGGGCTGCACGCTCGTCGATACCGCCG AAATGTATGGCGAAGGCCTGGCGGAAGCGCTGGTGGGCGAGGCGATCCAGGGGCGTCGCGACGAGGCCTTTCTGGTCACC AAGGTCTATCCGCACAATGCCTCGTTTGCTGGCGCGCAGGCGGCTTGCGAGCGCAGTCTGCGCCGCCTGAAAACCGACCG CATCGATCTGTACCTGCTGCATTGGCGCGGCAATGTTCCGCTGGCCGAAACCCTGCGCGCTTTTCAGGCCCTGCAGCAAG CCGGCAAGATTCGCCACTATGGTGTCAGCAACCTGGATATCTCCGACATGGAGGAGTTGTGGTCCTTGCCCGGCGGCCAC GGCGTGCAGACCAACCAGCTGCTCTACAACCTGACGCGCCGCGGCATTGAATGGGATTTGCTGCCCTGGCTGCACGAACG CCACATCCCGGTGATGGCCTACTCACCCATCGAGCAGTCCCGGCTGCTGCGCCAGCCCGGACTGACCGGCTTCGCGCAGC GCCACGGCATGCGGCCCGCGCAGGCTGCGCTGGCCTGGCTGCTGGCCCGGGACGGCGTCATGGCCATCCCCAAGACCAGC CACCCGGACCGGCTGACGGAAAACATCGCCGCGGCAGACATGGCGCTGAGTGGCGAGCAGCTCGCGGAACTTGACGCGCT TTTCCGTCCGCCGTCCGGCCCCATCGCGCTTGAAATGATCTAG
Upstream 100 bases:
>100_bases CTTCGGGCGGGATTGATTCCGCCAACGCATTAATCAGTTCGGCGCGCGCAGGCCGGATATTTCTTGTCCCGGAGCCGGTA CGGCGCGATGCGGCGCTACC
Downstream 100 bases:
>100_bases TGTGGTGTTGCATGCTTGACGGCACCCATAAAACCGATGAATTTTTGGTCAGGGCAAGGCGCAAACCACAGCAATAGCCC CGCTATTGCGCGGATTTGCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MAVMKSVLLPCGEAVPALGMGTWCMGETLGRRAQELATLRRGLDLGCTLVDTAEMYGEGLAEALVGEAIQGRRDEAFLVT KVYPHNASFAGAQAACERSLRRLKTDRIDLYLLHWRGNVPLAETLRAFQALQQAGKIRHYGVSNLDISDMEELWSLPGGH GVQTNQLLYNLTRRGIEWDLLPWLHERHIPVMAYSPIEQSRLLRQPGLTGFAQRHGMRPAQAALAWLLARDGVMAIPKTS HPDRLTENIAAADMALSGEQLAELDALFRPPSGPIALEMI
Sequences:
>Translated_280_residues MAVMKSVLLPCGEAVPALGMGTWCMGETLGRRAQELATLRRGLDLGCTLVDTAEMYGEGLAEALVGEAIQGRRDEAFLVT KVYPHNASFAGAQAACERSLRRLKTDRIDLYLLHWRGNVPLAETLRAFQALQQAGKIRHYGVSNLDISDMEELWSLPGGH GVQTNQLLYNLTRRGIEWDLLPWLHERHIPVMAYSPIEQSRLLRQPGLTGFAQRHGMRPAQAALAWLLARDGVMAIPKTS HPDRLTENIAAADMALSGEQLAELDALFRPPSGPIALEMI >Mature_279_residues AVMKSVLLPCGEAVPALGMGTWCMGETLGRRAQELATLRRGLDLGCTLVDTAEMYGEGLAEALVGEAIQGRRDEAFLVTK VYPHNASFAGAQAACERSLRRLKTDRIDLYLLHWRGNVPLAETLRAFQALQQAGKIRHYGVSNLDISDMEELWSLPGGHG VQTNQLLYNLTRRGIEWDLLPWLHERHIPVMAYSPIEQSRLLRQPGLTGFAQRHGMRPAQAALAWLLARDGVMAIPKTSH PDRLTENIAAADMALSGEQLAELDALFRPPSGPIALEMI
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24497577, Length=308, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI5174391, Length=308, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI223468663, Length=303, Percent_Identity=29.042904290429, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI310109922, Length=309, Percent_Identity=26.8608414239482, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI5174695, Length=297, Percent_Identity=26.5993265993266, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI5453543, Length=329, Percent_Identity=25.8358662613982, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI310109920, Length=329, Percent_Identity=25.8358662613982, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI45446745, Length=329, Percent_Identity=25.8358662613982, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4503285, Length=329, Percent_Identity=25.8358662613982, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI24497585, Length=303, Percent_Identity=27.0627062706271, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI291291012, Length=271, Percent_Identity=28.4132841328413, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4502049, Length=298, Percent_Identity=27.5167785234899, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI223718702, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI41152114, Length=216, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI41327764, Length=165, Percent_Identity=31.5151515151515, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788081, Length=272, Percent_Identity=50.3676470588235, Blast_Score=275, Evalue=2e-75, Organism=Escherichia coli, GI87081735, Length=297, Percent_Identity=31.3131313131313, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1786400, Length=262, Percent_Identity=28.2442748091603, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI87082198, Length=275, Percent_Identity=29.0909090909091, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1787674, Length=255, Percent_Identity=28.6274509803922, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788070, Length=299, Percent_Identity=28.0936454849498, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789199, Length=333, Percent_Identity=28.2282282282282, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789375, Length=316, Percent_Identity=27.5316455696203, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17537077, Length=300, Percent_Identity=29, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17537075, Length=300, Percent_Identity=29.6666666666667, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17561298, Length=286, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17552492, Length=282, Percent_Identity=25.886524822695, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71998625, Length=271, Percent_Identity=28.4132841328413, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17561300, Length=269, Percent_Identity=28.2527881040892, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17566692, Length=298, Percent_Identity=26.8456375838926, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17564128, Length=312, Percent_Identity=25.9615384615385, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17550248, Length=296, Percent_Identity=24.6621621621622, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320576, Length=276, Percent_Identity=29.7101449275362, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6322556, Length=273, Percent_Identity=27.1062271062271, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI45553081, Length=299, Percent_Identity=24.4147157190635, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24657054, Length=302, Percent_Identity=25.4966887417219, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI20129731, Length=301, Percent_Identity=26.578073089701, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24662789, Length=306, Percent_Identity=25.1633986928105, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281366140, Length=255, Percent_Identity=24.3137254901961, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30867; Mature: 30736
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMKSVLLPCGEAVPALGMGTWCMGETLGRRAQELATLRRGLDLGCTLVDTAEMYGEGL CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH AEALVGEAIQGRRDEAFLVTKVYPHNASFAGAQAACERSLRRLKTDRIDLYLLHWRGNVP HHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCC LAETLRAFQALQQAGKIRHYGVSNLDISDMEELWSLPGGHGVQTNQLLYNLTRRGIEWDL HHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCH LPWLHERHIPVMAYSPIEQSRLLRQPGLTGFAQRHGMRPAQAALAWLLARDGVMAIPKTS HHHHHHCCCCEEEECCCHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCEEECCCCC HPDRLTENIAAADMALSGEQLAELDALFRPPSGPIALEMI CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure AVMKSVLLPCGEAVPALGMGTWCMGETLGRRAQELATLRRGLDLGCTLVDTAEMYGEGL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH AEALVGEAIQGRRDEAFLVTKVYPHNASFAGAQAACERSLRRLKTDRIDLYLLHWRGNVP HHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCC LAETLRAFQALQQAGKIRHYGVSNLDISDMEELWSLPGGHGVQTNQLLYNLTRRGIEWDL HHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCH LPWLHERHIPVMAYSPIEQSRLLRQPGLTGFAQRHGMRPAQAALAWLLARDGVMAIPKTS HHHHHHCCCCEEEECCCHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCEEECCCCC HPDRLTENIAAADMALSGEQLAELDALFRPPSGPIALEMI CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]