| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789896
Identifier: 91789896
GI number: 91789896
Start: 4262137
End: 4263207
Strand: Reverse
Name: 91789896
Synonym: Bpro_4057
Alternate gene names: NA
Gene position: 4263207-4262137 (Counterclockwise)
Preceding gene: 91789897
Following gene: 91789894
Centisome position: 81.98
GC content: 65.17
Gene sequence:
>1071_bases ATGCAAAACTTCTGGCCGTCCTGCGGCTTCAGCACGCTCCACCGCAATGCCTGCGGCTGGCTGGTACCTGCCGACGATTA CCTGCGCCTGTTTCTGAGCCGCCCTGAGCTGGCGCTGGTGCCGGAATCCTGCACTGCCGAGCGCGCATTGCACGAGGCTT TGCTCGCCGCACCATCCCGCCCGGTGGCTGAGCCCGAACTACAGGCCTTGCAGGATGCCGATGCCCGCGACAGCTACAGG CTGTTTCTGCGCTTTCGCGACGGCCTGCTGGCTGCCGGCACGCTGGAAGCCTACTACCTGAGTCTCTTCCCCCGCGACGG CATGGGCCAGATCAACATACCGCCGCTTTTCATCGACCTGCTGGCCCAGGCCATCACGCGCAACTTGCTGGATGACTCCA CCGATGCCTACGAAGTGCGCGCTGGCGAGATGCTGTTTCGCAGCCAGCGCATCAGCACGGAGGGCGGGCAGGTGCTGAGC GGCGACCGTGAAACGCTGGACCTGCTCAACGAGACGGGCGGCCTCGGCGATATCGGGCGCTTTCTCGCGGAAGCGAAGGC GCCGCTACGCGATGTCGAGGTGCGCGTGCTCAGTGATGACAATGCGCCCGACTATTGGCAGCAGGTGGATCGCTACGCCT ATCTGCTCGACCTGACCCACGAAGTCAGCAACGACCTGAGCCACGGCCTGGTACTGACCATGACCCGGGCCCGTTCGGGC CTGAAGGCGCTGGCGAGCGTGCTGCAAAAATGGGTGCGGCATTTTCTGGGGGTGGCCGTCACCATCACACCCGTGCAAAA GGTGGACGACGAAGCCTGGCGCTGGCATGTGGGGCTGGATGCGGAGGCGACGGCCCTGCTCAACGATTTGTATGAAGGCC GGGACGTCGCCCCCGACCGCCTGCAGCGGCTGGTGAGCCTGTTCCGGCTGGAGTTCGCGGATCCGCGTGAGATGCGTGCC GACGTGGCGGGCAAGCCGGTTTACCTGGGGCTCATGATGAGCGCCGATGGCGTGGTCAGGTTGAAGCCGCAGAACCTGCT GGTGAACCTCCCGCTGTCCGCGGCTTCGTGA
Upstream 100 bases:
>100_bases GGGGTCATGAAAATAGGGGCGGGCCCGTATTTTTCGGGCCAGGCATGCTGCTCAAAAATAAGGCAATCTGGCAAGCCGTG TGATGTGAGACGATTGCTTC
Downstream 100 bases:
>100_bases CCGCAAGGTGCCTTTGCTCCTGCCTTTTCCTCAGTCGCTGTTCTCAACTTCCACCACCAGAACCCGCGCGGCACCCACAG GCGCCGCCACATGGGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MQNFWPSCGFSTLHRNACGWLVPADDYLRLFLSRPELALVPESCTAERALHEALLAAPSRPVAEPELQALQDADARDSYR LFLRFRDGLLAAGTLEAYYLSLFPRDGMGQINIPPLFIDLLAQAITRNLLDDSTDAYEVRAGEMLFRSQRISTEGGQVLS GDRETLDLLNETGGLGDIGRFLAEAKAPLRDVEVRVLSDDNAPDYWQQVDRYAYLLDLTHEVSNDLSHGLVLTMTRARSG LKALASVLQKWVRHFLGVAVTITPVQKVDDEAWRWHVGLDAEATALLNDLYEGRDVAPDRLQRLVSLFRLEFADPREMRA DVAGKPVYLGLMMSADGVVRLKPQNLLVNLPLSAAS
Sequences:
>Translated_356_residues MQNFWPSCGFSTLHRNACGWLVPADDYLRLFLSRPELALVPESCTAERALHEALLAAPSRPVAEPELQALQDADARDSYR LFLRFRDGLLAAGTLEAYYLSLFPRDGMGQINIPPLFIDLLAQAITRNLLDDSTDAYEVRAGEMLFRSQRISTEGGQVLS GDRETLDLLNETGGLGDIGRFLAEAKAPLRDVEVRVLSDDNAPDYWQQVDRYAYLLDLTHEVSNDLSHGLVLTMTRARSG LKALASVLQKWVRHFLGVAVTITPVQKVDDEAWRWHVGLDAEATALLNDLYEGRDVAPDRLQRLVSLFRLEFADPREMRA DVAGKPVYLGLMMSADGVVRLKPQNLLVNLPLSAAS >Mature_356_residues MQNFWPSCGFSTLHRNACGWLVPADDYLRLFLSRPELALVPESCTAERALHEALLAAPSRPVAEPELQALQDADARDSYR LFLRFRDGLLAAGTLEAYYLSLFPRDGMGQINIPPLFIDLLAQAITRNLLDDSTDAYEVRAGEMLFRSQRISTEGGQVLS GDRETLDLLNETGGLGDIGRFLAEAKAPLRDVEVRVLSDDNAPDYWQQVDRYAYLLDLTHEVSNDLSHGLVLTMTRARSG LKALASVLQKWVRHFLGVAVTITPVQKVDDEAWRWHVGLDAEATALLNDLYEGRDVAPDRLQRLVSLFRLEFADPREMRA DVAGKPVYLGLMMSADGVVRLKPQNLLVNLPLSAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39647; Mature: 39647
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNFWPSCGFSTLHRNACGWLVPADDYLRLFLSRPELALVPESCTAERALHEALLAAPSR CCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCC PVAEPELQALQDADARDSYRLFLRFRDGLLAAGTLEAYYLSLFPRDGMGQINIPPLFIDL CCCCHHHHHHHCCCCCCHHEEEEEECCCEEEHHHHHHHHHEECCCCCCCCCCCCHHHHHH LAQAITRNLLDDSTDAYEVRAGEMLFRSQRISTEGGQVLSGDRETLDLLNETGGLGDIGR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCCCHHHHH FLAEAKAPLRDVEVRVLSDDNAPDYWQQVDRYAYLLDLTHEVSNDLSHGLVLTMTRARSG HHHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH LKALASVLQKWVRHFLGVAVTITPVQKVDDEAWRWHVGLDAEATALLNDLYEGRDVAPDR HHHHHHHHHHHHHHHHCEEEEEECHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHH LQRLVSLFRLEFADPREMRADVAGKPVYLGLMMSADGVVRLKPQNLLVNLPLSAAS HHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCC >Mature Secondary Structure MQNFWPSCGFSTLHRNACGWLVPADDYLRLFLSRPELALVPESCTAERALHEALLAAPSR CCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCC PVAEPELQALQDADARDSYRLFLRFRDGLLAAGTLEAYYLSLFPRDGMGQINIPPLFIDL CCCCHHHHHHHCCCCCCHHEEEEEECCCEEEHHHHHHHHHEECCCCCCCCCCCCHHHHHH LAQAITRNLLDDSTDAYEVRAGEMLFRSQRISTEGGQVLSGDRETLDLLNETGGLGDIGR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCCCHHHHH FLAEAKAPLRDVEVRVLSDDNAPDYWQQVDRYAYLLDLTHEVSNDLSHGLVLTMTRARSG HHHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH LKALASVLQKWVRHFLGVAVTITPVQKVDDEAWRWHVGLDAEATALLNDLYEGRDVAPDR HHHHHHHHHHHHHHHHCEEEEEECHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHH LQRLVSLFRLEFADPREMRADVAGKPVYLGLMMSADGVVRLKPQNLLVNLPLSAAS HHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA