| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789888
Identifier: 91789888
GI number: 91789888
Start: 4251054
End: 4251497
Strand: Reverse
Name: 91789888
Synonym: Bpro_4049
Alternate gene names: NA
Gene position: 4251497-4251054 (Counterclockwise)
Preceding gene: 91789894
Following gene: 91789887
Centisome position: 81.76
GC content: 64.64
Gene sequence:
>444_bases ATGACTACCGTTGCCTCATCGAATGCTGCCACGTCCACCGGGGTGCGGCCCGTGTCGGGTTATGCCGGCGACATTCCGGT ACAGCTTGCCTATCAATGGATGCAGTCCGGCGAAGCCGTGCTGGTGGATGTACGTACCGACGCCGAGCGCGAATGGGTGG GCTACGTGCCGGGCGCCGTCGCACTGGCCTGGAAGCAGTGGCCAGGCATGGCCATGAACCCGCACTTCGACGAAGGCCTG AAAAACGCGGTGCCGGCCGGCAAGAAAGCCGTGCTGCTGTGCCGCAGCGGGGTGCGCTCCATTGCGGCCGCAAAACGCGC CACCGAACTGGGCATAGAGGCCTACAACATCCTGGAAGGCTTTGAAGGTGATGCCGATGAGCAGGCGCAACGGGGCCGCA AGGGCGGCTGGCGTTTTCGGGGCTTGCCCTGGCGGCAAAACTGA
Upstream 100 bases:
>100_bases CGGTCTGCGCGGGGCGAATAAACTTGGTTTGAATCCCGCTGAGCCCAGTCCCGTTTGGGCGGGCCGTGCGGGAACCGACA TCAAACACAGGAGTTGCGTC
Downstream 100 bases:
>100_bases GAGGGCGTGCCGGACGGGCGCGTTGCGAAGAATGTGAAGGAGCGTGAAGGAGTGCACAAAAGGTGCCTGGAAAGCGTGGC GCAAGCACAACTTTTTGTGA
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Rhodanese-Related Sulfurtransferase Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTVASSNAATSTGVRPVSGYAGDIPVQLAYQWMQSGEAVLVDVRTDAEREWVGYVPGAVALAWKQWPGMAMNPHFDEGL KNAVPAGKKAVLLCRSGVRSIAAAKRATELGIEAYNILEGFEGDADEQAQRGRKGGWRFRGLPWRQN
Sequences:
>Translated_147_residues MTTVASSNAATSTGVRPVSGYAGDIPVQLAYQWMQSGEAVLVDVRTDAEREWVGYVPGAVALAWKQWPGMAMNPHFDEGL KNAVPAGKKAVLLCRSGVRSIAAAKRATELGIEAYNILEGFEGDADEQAQRGRKGGWRFRGLPWRQN >Mature_146_residues TTVASSNAATSTGVRPVSGYAGDIPVQLAYQWMQSGEAVLVDVRTDAEREWVGYVPGAVALAWKQWPGMAMNPHFDEGLK NAVPAGKKAVLLCRSGVRSIAAAKRATELGIEAYNILEGFEGDADEQAQRGRKGGWRFRGLPWRQN
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15920; Mature: 15789
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVASSNAATSTGVRPVSGYAGDIPVQLAYQWMQSGEAVLVDVRTDAEREWVGYVPGAV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCHH ALAWKQWPGMAMNPHFDEGLKNAVPAGKKAVLLCRSGVRSIAAAKRATELGIEAYNILEG HHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHC FEGDADEQAQRGRKGGWRFRGLPWRQN CCCCCHHHHHCCCCCCCEECCCCCCCC >Mature Secondary Structure TTVASSNAATSTGVRPVSGYAGDIPVQLAYQWMQSGEAVLVDVRTDAEREWVGYVPGAV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCHH ALAWKQWPGMAMNPHFDEGLKNAVPAGKKAVLLCRSGVRSIAAAKRATELGIEAYNILEG HHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHC FEGDADEQAQRGRKGGWRFRGLPWRQN CCCCCHHHHHCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA