Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is bugT [H]

Identifier: 91789879

GI number: 91789879

Start: 4239756

End: 4240730

Strand: Direct

Name: bugT [H]

Synonym: Bpro_4039

Alternate gene names: 91789879

Gene position: 4239756-4240730 (Clockwise)

Preceding gene: 91789878

Following gene: 91789881

Centisome position: 81.53

GC content: 63.59

Gene sequence:

>975_bases
ATGACTTTCATTTCCCGCAGAACCCTTGTAACCGTTGCCGGCCTTGCCGCTGCCTCATGGCTGAACCCGGTGCGCGCGCA
GCTCGCAGGCAAGCCGGTCACCCTGATCGTTCCCGCGGCGGCCGGCGGCACCACGGACATCGCGGCGCGCATGCTGGCCG
AACCGCTGGGGCGGATTTTGCAGACCTCGGTCGTCGTGGACAACCGGGGCGGCGGCAACGGCAACATTGCCGGCCAGACC
GTCGCGCGCGGACCGGCCGACGGTACCAGCCTGCTGGTGCAGTATTCAGGTTACCAGTGCATCACACCGCTGATCCAGCC
GGTGGCCGGCTTTGACCCGGCCACCAACCTCAAGCCGCTGGGCCATCTAATCGACGCGCCACAATTGATGGTGGTACGCG
CTAATTTCCCGGCCGACAACTTCGCGGATTTTCTCAAACACGTCAAAGCCAATCCCGGCAAGGTCAACTACGCGTCCAGC
GGCAACGGATCACTGCAGCATGTCACGACCGAGCTGCTGAAGGACCTGACCAAAACCTTCATGGTGCACATCCCTTACCG
CGGCACGGGCCCGGCACTGAACGACCTGCTGGCCGGCACGGTGGACTGCACCATCACCACGCCGCCGCCACTGCTGCCAC
ACATCCGTGCCGGCAAGCTGAAAGCGCTGATGGTGACCGGTCGCACGCGACTGGCCGCACTGCCCAATGTGCAGACCGCG
ACCGAAATGAGAGTGCCGCTGGTGGCGTCTTCCTGGTTTGCGGTCTACGGCCCGACGGGTCTGTCTGCGGACCTTCAGAA
TCGCCTCTCCCTGGCCATCCGGCAGGTGGTCGAATCGGACAACTTCAGGAAACGCGCCGAGGAACAGGGCGCAAAGGCGA
TCGCCATGAATGGCGCGGAACTGGATGCGCTGGGTAGCAACGAACGCAAGATGTGGGGACGCATCGTCAAAGTGGCCAAT
ATCAAGGCTGACTAG

Upstream 100 bases:

>100_bases
CAAAAAATCCGCTCGGTCTATGTGCGCAACCCCGACCTCAACCTGATCGAGATTTCCGAGCTGGCCTGAACCGGCATCCA
TCACCATTCCAGGAGACAAA

Downstream 100 bases:

>100_bases
ATAAGGCCCCCACGCTTTTCACTGCGTGTAATGCGCTGCCCCCCGAGGGGGCGCTGCGCCTGCGGTCTGGCGAAGCCAGT
CCCGCGGCCCCTGCTGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRILQTSVVVDNRGGGNGNIAGQT
VARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPLGHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASS
GNGSLQHVTTELLKDLTKTFMVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA
TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAELDALGSNERKMWGRIVKVAN
IKAD

Sequences:

>Translated_324_residues
MTFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRILQTSVVVDNRGGGNGNIAGQT
VARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPLGHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASS
GNGSLQHVTTELLKDLTKTFMVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA
TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAELDALGSNERKMWGRIVKVAN
IKAD
>Mature_323_residues
TFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRILQTSVVVDNRGGGNGNIAGQTV
ARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPLGHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASSG
NGSLQHVTTELLKDLTKTFMVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTAT
EMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAELDALGSNERKMWGRIVKVANI
KAD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34269; Mature: 34138

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
QTSVVVDNRGGGNGNIAGQTVARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPL
HHHEEEECCCCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHH
GHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASSGNGSLQHVTTELLKDLTKTF
HHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
MVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA
EEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCHHEEECCCCCCH
TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAE
HHHCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCE
LDALGSNERKMWGRIVKVANIKAD
EECCCCCHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
TFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
QTSVVVDNRGGGNGNIAGQTVARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPL
HHHEEEECCCCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHH
GHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASSGNGSLQHVTTELLKDLTKTF
HHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
MVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA
EEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCHHEEECCCCCCH
TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAE
HHHCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCE
LDALGSNERKMWGRIVKVANIKAD
EECCCCCHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111902; 12910271; 2873570 [H]