| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bugT [H]
Identifier: 91789879
GI number: 91789879
Start: 4239756
End: 4240730
Strand: Direct
Name: bugT [H]
Synonym: Bpro_4039
Alternate gene names: 91789879
Gene position: 4239756-4240730 (Clockwise)
Preceding gene: 91789878
Following gene: 91789881
Centisome position: 81.53
GC content: 63.59
Gene sequence:
>975_bases ATGACTTTCATTTCCCGCAGAACCCTTGTAACCGTTGCCGGCCTTGCCGCTGCCTCATGGCTGAACCCGGTGCGCGCGCA GCTCGCAGGCAAGCCGGTCACCCTGATCGTTCCCGCGGCGGCCGGCGGCACCACGGACATCGCGGCGCGCATGCTGGCCG AACCGCTGGGGCGGATTTTGCAGACCTCGGTCGTCGTGGACAACCGGGGCGGCGGCAACGGCAACATTGCCGGCCAGACC GTCGCGCGCGGACCGGCCGACGGTACCAGCCTGCTGGTGCAGTATTCAGGTTACCAGTGCATCACACCGCTGATCCAGCC GGTGGCCGGCTTTGACCCGGCCACCAACCTCAAGCCGCTGGGCCATCTAATCGACGCGCCACAATTGATGGTGGTACGCG CTAATTTCCCGGCCGACAACTTCGCGGATTTTCTCAAACACGTCAAAGCCAATCCCGGCAAGGTCAACTACGCGTCCAGC GGCAACGGATCACTGCAGCATGTCACGACCGAGCTGCTGAAGGACCTGACCAAAACCTTCATGGTGCACATCCCTTACCG CGGCACGGGCCCGGCACTGAACGACCTGCTGGCCGGCACGGTGGACTGCACCATCACCACGCCGCCGCCACTGCTGCCAC ACATCCGTGCCGGCAAGCTGAAAGCGCTGATGGTGACCGGTCGCACGCGACTGGCCGCACTGCCCAATGTGCAGACCGCG ACCGAAATGAGAGTGCCGCTGGTGGCGTCTTCCTGGTTTGCGGTCTACGGCCCGACGGGTCTGTCTGCGGACCTTCAGAA TCGCCTCTCCCTGGCCATCCGGCAGGTGGTCGAATCGGACAACTTCAGGAAACGCGCCGAGGAACAGGGCGCAAAGGCGA TCGCCATGAATGGCGCGGAACTGGATGCGCTGGGTAGCAACGAACGCAAGATGTGGGGACGCATCGTCAAAGTGGCCAAT ATCAAGGCTGACTAG
Upstream 100 bases:
>100_bases CAAAAAATCCGCTCGGTCTATGTGCGCAACCCCGACCTCAACCTGATCGAGATTTCCGAGCTGGCCTGAACCGGCATCCA TCACCATTCCAGGAGACAAA
Downstream 100 bases:
>100_bases ATAAGGCCCCCACGCTTTTCACTGCGTGTAATGCGCTGCCCCCCGAGGGGGCGCTGCGCCTGCGGTCTGGCGAAGCCAGT CCCGCGGCCCCTGCTGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRILQTSVVVDNRGGGNGNIAGQT VARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPLGHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASS GNGSLQHVTTELLKDLTKTFMVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAELDALGSNERKMWGRIVKVAN IKAD
Sequences:
>Translated_324_residues MTFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRILQTSVVVDNRGGGNGNIAGQT VARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPLGHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASS GNGSLQHVTTELLKDLTKTFMVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAELDALGSNERKMWGRIVKVAN IKAD >Mature_323_residues TFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRILQTSVVVDNRGGGNGNIAGQTV ARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPLGHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASSG NGSLQHVTTELLKDLTKTFMVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTAT EMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAELDALGSNERKMWGRIVKVANI KAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34269; Mature: 34138
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH QTSVVVDNRGGGNGNIAGQTVARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPL HHHEEEECCCCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHH GHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASSGNGSLQHVTTELLKDLTKTF HHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH MVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA EEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCHHEEECCCCCCH TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAE HHHCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCE LDALGSNERKMWGRIVKVANIKAD EECCCCCHHHHHHHHHHHEECCCC >Mature Secondary Structure TFISRRTLVTVAGLAAASWLNPVRAQLAGKPVTLIVPAAAGGTTDIAARMLAEPLGRIL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH QTSVVVDNRGGGNGNIAGQTVARGPADGTSLLVQYSGYQCITPLIQPVAGFDPATNLKPL HHHEEEECCCCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCHH GHLIDAPQLMVVRANFPADNFADFLKHVKANPGKVNYASSGNGSLQHVTTELLKDLTKTF HHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH MVHIPYRGTGPALNDLLAGTVDCTITTPPPLLPHIRAGKLKALMVTGRTRLAALPNVQTA EEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCHHEEECCCCCCH TEMRVPLVASSWFAVYGPTGLSADLQNRLSLAIRQVVESDNFRKRAEEQGAKAIAMNGAE HHHCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCE LDALGSNERKMWGRIVKVANIKAD EECCCCCHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]