| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is tgs1 [H]
Identifier: 91789881
GI number: 91789881
Start: 4242712
End: 4244163
Strand: Direct
Name: tgs1 [H]
Synonym: Bpro_4042
Alternate gene names: 91789881
Gene position: 4242712-4244163 (Clockwise)
Preceding gene: 91789879
Following gene: 91789882
Centisome position: 81.59
GC content: 67.08
Gene sequence:
>1452_bases ATGAGCAAGGTCGACACCGCCTGGCTGCGCATGGACAGCGCCGCCAACCTGATGATGATTGTCGGCGTGTGGCAGCTGGC GCCGGGCGTCACGTACGCCGCGGTGTGCGAGCGCATCGAGGGCAGCCTGCTCAGGTACGACCGCTTCCGGCAGCGCGTGG TCGAGGATGCGGCGGGCGCCACCTGGGTGAACGCCCGCAACTTTGACCTCGCCCGGCATGTGGTGCTGGAAAAGCTGCCG CCAGCCACCAGGACCGCGCAGGGCCACCAACAGGAAGCGCTGCAGGACCGCGTGGCCGAGCTCGCGGCCCAGCCACTGGA CCGCAAGCACCCGCTCTGGCAGATCCACCTGATCGAGGACTACACCGGTGCGGATGGCGTGAAGGGCAGCGCCATGATTG TGCGCATACACCACTGCATTGGTGACGGCATTGCGCTGATCTCGGTGACGATGTCACTGGTCGACGGCGGCGCACCGCCG CCCGAGCGCCGCCAGAAGGCTGCCGGCACCGGCAGCGCGGAAGACTGGATCACCGACACCCTGCTCAAGCCGTTCACCGA CATCACCGTCAAGGCGCTGGGCGCGGTGGGCGAAGGCGCAGCGCGCTCGCTGGGCCTGCTGGGCAATCCGAAAATGGGCA TGGCGCAGGGCCTGGAAAAAGGCGTGAGCGGCTCGCTCGACATGGCCAGGGTGCTGCTCCAGTTGGTCTCGGACTCGGCC GCGCTGGCCCTGATGCCGGACGATGCCAAAACCCGGCTCAAGGGCAAGCCCGGCGGCGCCAAGAAGGTCGCTTGGTGCCA GCCGATACCGCTGGACGAGGTCAAGGCCGTCGGCAAGGCGCTCAGCTGCTCCATCAACGATGTGCTCCTCAGCTGTGTGG CCGGGGCGATCGGCGAATACCTCAAGACCTGTGGCGACGATGTGGCGGGCCAGGAAATCCGCGCCATGGTGCCGGTGAAC CTGCGCCCCCTGGAGCATGCCCACAAGCTCGGCAACCGCTTTGGCCTGGTGCCGCTGCTGCTGCCCATCGGCATGGAGAA CCCGGTCGAGCGCGTGTACGAGGTGCGCCGCCGCATGGCGGCCCTGAAGGGCAGCTACCAGCCGCTGCTGGCCTTCAGCC TGCTGGCCGTGGCGGGCCTGCTGATCAAGCCGGCGCAGGACATGATGCTCAACCTGTTTGCCAAAAAAACGACGGCCGTG ATGACCAACGTGCCGGGCCCGCGCGAAAAGCTCAGGTTCTGCGGCGCCACGCTGGAGCAAAGCATGTTCTGGGTGCCGCA GTCGGGCGACGTGGGGCTGGGTGTGTCCATCCTCAGCTACGGCGGCGGTGTGCAGTTTGGCGTGATCACCGACAGCCTGC TGTGCCCGGAGCCGCAGCGCATCATTGATGAGTTTGTGCCCGAGTTTGCCAAGCTGTCCATCGTGACGCTGATGCTGCCC TGGGGCGAGTAG
Upstream 100 bases:
>100_bases CCGGGAAGACGTTCAGGGAGGCGCTGGCAGCGTTCAGAAAAACCTTCAGGCCAATATCAGGCGGGCCGTCTCCGGCACGC TGGGCCTGTCGGGCGAGCGC
Downstream 100 bases:
>100_bases TCCCCAAGACGGATTTGGTGAGGGCGATTCCGGCGTCAAGGCTCCCGGGCTCTCTTGCAGCACTGTTGCTGTTTTGCGAA CCGCATGCGTCGCTTCATGC
Product: diacylglycerol O-acyltransferase
Products: NA
Alternate protein names: TGS1; Probable triacylglycerol synthase tgs1 [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSKVDTAWLRMDSAANLMMIVGVWQLAPGVTYAAVCERIEGSLLRYDRFRQRVVEDAAGATWVNARNFDLARHVVLEKLP PATRTAQGHQQEALQDRVAELAAQPLDRKHPLWQIHLIEDYTGADGVKGSAMIVRIHHCIGDGIALISVTMSLVDGGAPP PERRQKAAGTGSAEDWITDTLLKPFTDITVKALGAVGEGAARSLGLLGNPKMGMAQGLEKGVSGSLDMARVLLQLVSDSA ALALMPDDAKTRLKGKPGGAKKVAWCQPIPLDEVKAVGKALSCSINDVLLSCVAGAIGEYLKTCGDDVAGQEIRAMVPVN LRPLEHAHKLGNRFGLVPLLLPIGMENPVERVYEVRRRMAALKGSYQPLLAFSLLAVAGLLIKPAQDMMLNLFAKKTTAV MTNVPGPREKLRFCGATLEQSMFWVPQSGDVGLGVSILSYGGGVQFGVITDSLLCPEPQRIIDEFVPEFAKLSIVTLMLP WGE
Sequences:
>Translated_483_residues MSKVDTAWLRMDSAANLMMIVGVWQLAPGVTYAAVCERIEGSLLRYDRFRQRVVEDAAGATWVNARNFDLARHVVLEKLP PATRTAQGHQQEALQDRVAELAAQPLDRKHPLWQIHLIEDYTGADGVKGSAMIVRIHHCIGDGIALISVTMSLVDGGAPP PERRQKAAGTGSAEDWITDTLLKPFTDITVKALGAVGEGAARSLGLLGNPKMGMAQGLEKGVSGSLDMARVLLQLVSDSA ALALMPDDAKTRLKGKPGGAKKVAWCQPIPLDEVKAVGKALSCSINDVLLSCVAGAIGEYLKTCGDDVAGQEIRAMVPVN LRPLEHAHKLGNRFGLVPLLLPIGMENPVERVYEVRRRMAALKGSYQPLLAFSLLAVAGLLIKPAQDMMLNLFAKKTTAV MTNVPGPREKLRFCGATLEQSMFWVPQSGDVGLGVSILSYGGGVQFGVITDSLLCPEPQRIIDEFVPEFAKLSIVTLMLP WGE >Mature_482_residues SKVDTAWLRMDSAANLMMIVGVWQLAPGVTYAAVCERIEGSLLRYDRFRQRVVEDAAGATWVNARNFDLARHVVLEKLPP ATRTAQGHQQEALQDRVAELAAQPLDRKHPLWQIHLIEDYTGADGVKGSAMIVRIHHCIGDGIALISVTMSLVDGGAPPP ERRQKAAGTGSAEDWITDTLLKPFTDITVKALGAVGEGAARSLGLLGNPKMGMAQGLEKGVSGSLDMARVLLQLVSDSAA LALMPDDAKTRLKGKPGGAKKVAWCQPIPLDEVKAVGKALSCSINDVLLSCVAGAIGEYLKTCGDDVAGQEIRAMVPVNL RPLEHAHKLGNRFGLVPLLLPIGMENPVERVYEVRRRMAALKGSYQPLLAFSLLAVAGLLIKPAQDMMLNLFAKKTTAVM TNVPGPREKLRFCGATLEQSMFWVPQSGDVGLGVSILSYGGGVQFGVITDSLLCPEPQRIIDEFVPEFAKLSIVTLMLPW GE
Specific function: Upon expression in E.coli functions as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Prefers C(26:0)-CoA over C(18:1)-CoA. TG synthesis activity increases in M.tuberculosis upon oxygen depletion and NO
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014292 - InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 51978; Mature: 51847
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVDTAWLRMDSAANLMMIVGVWQLAPGVTYAAVCERIEGSLLRYDRFRQRVVEDAAGA CCCCCCHHHEECCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TWVNARNFDLARHVVLEKLPPATRTAQGHQQEALQDRVAELAAQPLDRKHPLWQIHLIED EEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC YTGADGVKGSAMIVRIHHCIGDGIALISVTMSLVDGGAPPPERRQKAAGTGSAEDWITDT CCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH LLKPFTDITVKALGAVGEGAARSLGLLGNPKMGMAQGLEKGVSGSLDMARVLLQLVSDSA HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC ALALMPDDAKTRLKGKPGGAKKVAWCQPIPLDEVKAVGKALSCSINDVLLSCVAGAIGEY EEEECCCCHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LKTCGDDVAGQEIRAMVPVNLRPLEHAHKLGNRFGLVPLLLPIGMENPVERVYEVRRRMA HHHHCCCCCCCHHEEECCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHH ALKGSYQPLLAFSLLAVAGLLIKPAQDMMLNLFAKKTTAVMTNVPGPREKLRFCGATLEQ HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH SMFWVPQSGDVGLGVSILSYGGGVQFGVITDSLLCPEPQRIIDEFVPEFAKLSIVTLMLP CEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEC WGE CCC >Mature Secondary Structure SKVDTAWLRMDSAANLMMIVGVWQLAPGVTYAAVCERIEGSLLRYDRFRQRVVEDAAGA CCCCCHHHEECCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TWVNARNFDLARHVVLEKLPPATRTAQGHQQEALQDRVAELAAQPLDRKHPLWQIHLIED EEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC YTGADGVKGSAMIVRIHHCIGDGIALISVTMSLVDGGAPPPERRQKAAGTGSAEDWITDT CCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH LLKPFTDITVKALGAVGEGAARSLGLLGNPKMGMAQGLEKGVSGSLDMARVLLQLVSDSA HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC ALALMPDDAKTRLKGKPGGAKKVAWCQPIPLDEVKAVGKALSCSINDVLLSCVAGAIGEY EEEECCCCHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LKTCGDDVAGQEIRAMVPVNLRPLEHAHKLGNRFGLVPLLLPIGMENPVERVYEVRRRMA HHHHCCCCCCCHHEEECCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHH ALKGSYQPLLAFSLLAVAGLLIKPAQDMMLNLFAKKTTAVMTNVPGPREKLRFCGATLEQ HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH SMFWVPQSGDVGLGVSILSYGGGVQFGVITDSLLCPEPQRIIDEFVPEFAKLSIVTLMLP CEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEC WGE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]