| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789878
Identifier: 91789878
GI number: 91789878
Start: 4239332
End: 4239724
Strand: Direct
Name: 91789878
Synonym: Bpro_4038
Alternate gene names: NA
Gene position: 4239332-4239724 (Clockwise)
Preceding gene: 91789877
Following gene: 91789879
Centisome position: 81.52
GC content: 59.8
Gene sequence:
>393_bases GTGACCGATCATCTGGATCATCTGGTACTGACCACGTCCAACGAAACCGCCTGCGTCGATTTTTATACCCGGGTGCTGGG CATGACGCTGGAAAGTTTTGTGGGTGGTACGCCCCCGGTAGAGCGCCGCGCATTCAAGTTCGGCCAGCAGAAAATCAACC TGCACATCAGAGGCGCCGAGTTCGAGCCCAAAACGCATCTGCCGGTGCCCGGTGCACTGGACTTGTGTTTCATCGCCAGC GTGCCCCTGCAGCAGGTGATGGAGCGGCTGGAGCGCGAACGCTGGCCGATTATCGAAGGGCCCGTTGTACGCACCGGCGC CACGCAAAAAATCCGCTCGGTCTATGTGCGCAACCCCGACCTCAACCTGATCGAGATTTCCGAGCTGGCCTGA
Upstream 100 bases:
>100_bases TCGTCGGCCACGAGGTACCGGGCCAGGTGGCCAAGGCGGGGCGCATTGAAGACCTGCATCCGGCGCCGGAATTTGTGGCG GCCCTGCGGGAGCAGTTCGC
Downstream 100 bases:
>100_bases ACCGGCATCCATCACCATTCCAGGAGACAAAATGACTTTCATTTCCCGCAGAACCCTTGTAACCGTTGCCGGCCTTGCCG CTGCCTCATGGCTGAACCCG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTDHLDHLVLTTSNETACVDFYTRVLGMTLESFVGGTPPVERRAFKFGQQKINLHIRGAEFEPKTHLPVPGALDLCFIAS VPLQQVMERLERERWPIIEGPVVRTGATQKIRSVYVRNPDLNLIEISELA
Sequences:
>Translated_130_residues MTDHLDHLVLTTSNETACVDFYTRVLGMTLESFVGGTPPVERRAFKFGQQKINLHIRGAEFEPKTHLPVPGALDLCFIAS VPLQQVMERLERERWPIIEGPVVRTGATQKIRSVYVRNPDLNLIEISELA >Mature_129_residues TDHLDHLVLTTSNETACVDFYTRVLGMTLESFVGGTPPVERRAFKFGQQKINLHIRGAEFEPKTHLPVPGALDLCFIASV PLQQVMERLERERWPIIEGPVVRTGATQKIRSVYVRNPDLNLIEISELA
Specific function: Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidogly
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI254039722, Length=123, Percent_Identity=47.9674796747967, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14683; Mature: 14552
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHLDHLVLTTSNETACVDFYTRVLGMTLESFVGGTPPVERRAFKFGQQKINLHIRGAE CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEEECCC FEPKTHLPVPGALDLCFIASVPLQQVMERLERERWPIIEGPVVRTGATQKIRSVYVRNPD CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHHEEEEECCC LNLIEISELA CCEEEECCCC >Mature Secondary Structure TDHLDHLVLTTSNETACVDFYTRVLGMTLESFVGGTPPVERRAFKFGQQKINLHIRGAE CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEEECCC FEPKTHLPVPGALDLCFIASVPLQQVMERLERERWPIIEGPVVRTGATQKIRSVYVRNPD CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHHEEEEECCC LNLIEISELA CCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]