| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789841
Identifier: 91789841
GI number: 91789841
Start: 4198376
End: 4200346
Strand: Direct
Name: 91789841
Synonym: Bpro_4001
Alternate gene names: NA
Gene position: 4198376-4200346 (Clockwise)
Preceding gene: 91789840
Following gene: 91789842
Centisome position: 80.73
GC content: 50.48
Gene sequence:
>1971_bases ATGGCTGAGAGTTTCGTTCTGCCCGGGGGGCTGATTGGTCGCTTTGCCGTGGTCAAGTTGTGGCCAGCGATCAAGACGGC AGAGGACGAATGCATAGCCCGGTTAAAAATCGCGGCAACTGCTCTTGGCCTGGATTGTGTCGAAGTTCATGCCAATGGCT CACTCTTGAGTGACCCGGATACCGTGATAACCAAAAAAGATGTTGATTTTGTTTTGCATCTTCATTACGACACGCCCAAA TTCTATGATGCATTTTCATTTGTAGCCCTGTGGAACCCGACTCAGTTCTACCATGAGTGGGGCTATCAACGTACCTCGCG AAATTTGTTAACCCACGATGATTTCGTCAGTTGCAGTTCACCAGCAGCAGATGATCATGTAGGACGTATGGTGCGAAGTG CTGCAACACATCTTCCCGCACTATTTAACCTTTACCACTCCACGGCCGATATTGTCCATCCGCCCTCACTGGGTGACCAC AAGCTCTTTTACGCGGGGATTAACTGGGAAGCCATTAGTGGTGGCAAATCCCGCCATCAGGACGTACTCAAGCGCCTCGA CCAGGCCGGGCTCATTCGCATCTATGGCCCAACAATATTTCAGAACGTGAAAGTCTGGGATGGGTACGCCAACTACGTGC GAGAGATTCCGTTTGACGGGGTTTCCATGCTCGACGAAATAGCAAAGGCAGGTATTGCTCTGGTCTTATCCTCGCAAGCA CACAAAAATTCAGAGCTGATGTCAAATCGACTGTTCGAAAGTGTGGCAGCCGGGGCATTGGTTATTTGCGACGAAAACAA CTTTGCCAGAAGATTCTTTGGCGATTCCCTGCTCTATATTGACAGCCGCTGCTCCGTCGAGCAAATTTTTGAAGACATTC AAAAGCACCTGACTTGGGCAAAAGCGAATCCAGGTGAAGCGCTTTCCTTGATCAAAAAAGCGCAGGGGATTTTCAGGGAA AAATTCACGCTGAAGAAAAACCTGAGAGATCTTTATGCAGGCTTTCAAGACCGGAAAGCCAATTTACTAAAGAGACAAGG ACTGGACGGCCAGGCACCACACATCAAGGTTGGCCTCTACCTTCTTCTGCCGGTGTATTCAGAGAAAGTTTTGCACGCAC ACGTCGCCAGCGTCGTGGCTCAGGAATACAAAGAGTTTTCACCGGTTCTGGTTATCGACAAAGCCTTCTCGACGCAGAAT CGATCTGATATTGCGCAAGTCCTTGAAAAGGCATCGGTACCAATTGAGTTAATTGCGGTCGACTTCTTTAACTACGGATC TGTGGCCGACATCCAATACCCCCGTAAACTTGGTGCGGTTATTGCTGATGTGCTGAAAAACGCCCAGCAAGTAGAGGCCA TCGTAGTTGTTGCACCCAATGAAGAGATTTTCTCAAATCACCTTCAGGTTCTTGCCTGCAGTTTGATACGCAACCCGGAC GCAAACTGCGCGGCCACGGCTGCCATCATCAAACACGGAAACACCCCGGTGCACGGGATACATGAGCTATTGAACTTCGG CTTCCTCAATCCGGCTGCTCCACACGGCTATGCACGCTTTATTTTCCGGACTTCAGCGCTCCCTGCTGATCTGGGTATAG CCCTGCCTTATTTGGATAGAAAATCGCTGGCCGCCATGGTCGGTGAAAATGTTATCCATCAGGAAATTCCGGCAACACTG GTCATTGATGTAGGGCAAGAGTTCCCCAATGGCCCATGGGACGAAGGGCAGGAAAATGAGTTGATAGGAGACTTTGCTCC AAAGTCATTCACCATTTATAAAGGTTTCACCCGTGATTTGCCCTCGCTGGAACCTCGCATCGCAGCCCCTGCCCCGCCCC CTCCTTACCCAAGGCTCAGTTGGCGCTGGTTGTCCCACCAAGTCAGAGCGCTGCGCGCGGACGGTTTATTGGCGCGGTTC AGGGTTCTGAAAACCAGACTCGGGTTTGAACACGTTGACCATGCTGTTTAA
Upstream 100 bases:
>100_bases CGGTCAATTTCCGGTCGTATCACTGCAATGGGCTACTAACCTCCGCTTGAGATTAATAGCGCCTGTTCGTTTCTATAAAT AATCATGGGAAAGTAATAGC
Downstream 100 bases:
>100_bases ACAGAAACAACATGGCTAAACGCTTTAGCTAAAGCCATCCAGTCAAATATGAATCCTCACGCCGCAAAACCAATCTCATT GGCCTCACTTGCTCGAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MAESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPDTVITKKDVDFVLHLHYDTPK FYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSSPAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDH KLFYAGINWEAISGGKSRHQDVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWAKANPGEALSLIKKAQGIFRE KFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLYLLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQN RSDIAQVLEKASVPIELIAVDFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDRKSLAAMVGENVIHQEIPATL VIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDLPSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARF RVLKTRLGFEHVDHAV
Sequences:
>Translated_656_residues MAESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPDTVITKKDVDFVLHLHYDTPK FYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSSPAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDH KLFYAGINWEAISGGKSRHQDVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWAKANPGEALSLIKKAQGIFRE KFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLYLLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQN RSDIAQVLEKASVPIELIAVDFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDRKSLAAMVGENVIHQEIPATL VIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDLPSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARF RVLKTRLGFEHVDHAV >Mature_655_residues AESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPDTVITKKDVDFVLHLHYDTPKF YDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSSPAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDHK LFYAGINWEAISGGKSRHQDVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQAH KNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWAKANPGEALSLIKKAQGIFREK FTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLYLLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQNR SDIAQVLEKASVPIELIAVDFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPDA NCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDRKSLAAMVGENVIHQEIPATLV IDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDLPSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARFR VLKTRLGFEHVDHAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72851; Mature: 72720
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPD CCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC TVITKKDVDFVLHLHYDTPKFYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSS CEEEECCCEEEEEEECCCCHHHHHHHEEEECCCHHHHHHHCCHHHCCCCCCCCCCCCCCC PAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDHKLFYAGINWEAISGGKSRHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCHHHH DVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA HHHHHHHHCCEEEEECCHHHCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCC HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWA CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEC KANPGEALSLIKKAQGIFREKFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHE LLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQNRSDIAQVLEKASVPIELIAV EEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE DFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD EECCCCCEECCCCHHHHHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCC ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDR CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCH KSLAAMVGENVIHQEIPATLVIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDL HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC PSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARFRVLKTRLGFEHVDHAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCC >Mature Secondary Structure AESFVLPGGLIGRFAVVKLWPAIKTAEDECIARLKIAATALGLDCVEVHANGSLLSDPD CCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC TVITKKDVDFVLHLHYDTPKFYDAFSFVALWNPTQFYHEWGYQRTSRNLLTHDDFVSCSS CEEEECCCEEEEEEECCCCHHHHHHHEEEECCCHHHHHHHCCHHHCCCCCCCCCCCCCCC PAADDHVGRMVRSAATHLPALFNLYHSTADIVHPPSLGDHKLFYAGINWEAISGGKSRHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCHHHH DVLKRLDQAGLIRIYGPTIFQNVKVWDGYANYVREIPFDGVSMLDEIAKAGIALVLSSQA HHHHHHHHCCEEEEECCHHHCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCC HKNSELMSNRLFESVAAGALVICDENNFARRFFGDSLLYIDSRCSVEQIFEDIQKHLTWA CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEC KANPGEALSLIKKAQGIFREKFTLKKNLRDLYAGFQDRKANLLKRQGLDGQAPHIKVGLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEHE LLLPVYSEKVLHAHVASVVAQEYKEFSPVLVIDKAFSTQNRSDIAQVLEKASVPIELIAV EEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE DFFNYGSVADIQYPRKLGAVIADVLKNAQQVEAIVVVAPNEEIFSNHLQVLACSLIRNPD EECCCCCEECCCCHHHHHHHHHHHHHCHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCCC ANCAATAAIIKHGNTPVHGIHELLNFGFLNPAAPHGYARFIFRTSALPADLGIALPYLDR CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCH KSLAAMVGENVIHQEIPATLVIDVGQEFPNGPWDEGQENELIGDFAPKSFTIYKGFTRDL HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC PSLEPRIAAPAPPPPYPRLSWRWLSHQVRALRADGLLARFRVLKTRLGFEHVDHAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA