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The map label for this gene is rfbA [H]

Identifier: 91789842

GI number: 91789842

Start: 4200395

End: 4201225

Strand: Direct

Name: rfbA [H]

Synonym: Bpro_4002

Alternate gene names: 91789842

Gene position: 4200395-4201225 (Clockwise)

Preceding gene: 91789841

Following gene: 91789843

Centisome position: 80.77

GC content: 51.62

Gene sequence:

>831_bases
ATGAATCCTCACGCCGCAAAACCAATCTCATTGGCCTCACTTGCTCGAAGCATGTGGAGCAACCGCCAGCTCATTTTGCA
GATGACCAAGCGCGACGTGATAGGCCGCTACAAGGGCTCGGTCATGGGCGTGATGTGGTCGCTCTTCAATCCGCTATTTT
TACTGCTCATATACACCTTTGTGTTCTCAGTGGTCTTCAAGGCCCGCTGGGGGACTGACCTTCATGAAAGCAAGTCTCAA
TTTGCCACTCTGTTGTTTGTTGGCATGATCGTGCACGGCTTGTTCGCGGAAACATTGAATCGTGCGCCAGGACTTATCCT
GAGCAATGTCAGCTATGTGAAAAAGATCGTATTCCCGCTCGAGATTTTGCCCGTCGTGGCTGATGGTGCAGCATTATTTC
ACGCGATCGTCAGCGTGTTGGTTCTTCTGATCGCTTTTGTACTGCTCAATGGTTATCTACAATGGACCACTGTATTTTTG
CCTTTGATACTCCTTCCACTGCTGGTCCTGATTTTAGGTGCTGCGTGGGCGCTGGCCTCGCTAGGGGTCTACCTTCGGGA
CGTCGCGCAGCCCATAGGCCTGATCATGACAGTGCTGCTTTTCGCCTCCCCGGTGTTTTATCCAATTACAGCCCTGCCTG
AACGCATCCGGCCCTGGCTGATGCTGAATCCGCTCACCTTTGTTATTGAACAAGCCCGCGCCGTCTTGATTTTTGGGCAA
TTGCCAGATTGGGTGGGGCTGGCAGCCTATAGCCTTGTTTCCGTATTTATTGCTTGGGTAGGTTATGCCTGGTTCCAGAA
AACCCGCAAAGGTTTTGCCAATGTCCTCTGA

Upstream 100 bases:

>100_bases
CAGGGTTCTGAAAACCAGACTCGGGTTTGAACACGTTGACCATGCTGTTTAAACAGAAACAACATGGCTAAACGCTTTAG
CTAAAGCCATCCAGTCAAAT

Downstream 100 bases:

>100_bases
CGATATTGCCATCACCGTTCAAGGCGTGTCCAAGCGCTATGAGCTTTACCACAAACCCAGTGACCAGCTTAAGCAGTTCC
TGCTGCCGCGGCTTCAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNPHAAKPISLASLARSMWSNRQLILQMTKRDVIGRYKGSVMGVMWSLFNPLFLLLIYTFVFSVVFKARWGTDLHESKSQ
FATLLFVGMIVHGLFAETLNRAPGLILSNVSYVKKIVFPLEILPVVADGAALFHAIVSVLVLLIAFVLLNGYLQWTTVFL
PLILLPLLVLILGAAWALASLGVYLRDVAQPIGLIMTVLLFASPVFYPITALPERIRPWLMLNPLTFVIEQARAVLIFGQ
LPDWVGLAAYSLVSVFIAWVGYAWFQKTRKGFANVL

Sequences:

>Translated_276_residues
MNPHAAKPISLASLARSMWSNRQLILQMTKRDVIGRYKGSVMGVMWSLFNPLFLLLIYTFVFSVVFKARWGTDLHESKSQ
FATLLFVGMIVHGLFAETLNRAPGLILSNVSYVKKIVFPLEILPVVADGAALFHAIVSVLVLLIAFVLLNGYLQWTTVFL
PLILLPLLVLILGAAWALASLGVYLRDVAQPIGLIMTVLLFASPVFYPITALPERIRPWLMLNPLTFVIEQARAVLIFGQ
LPDWVGLAAYSLVSVFIAWVGYAWFQKTRKGFANVL
>Mature_276_residues
MNPHAAKPISLASLARSMWSNRQLILQMTKRDVIGRYKGSVMGVMWSLFNPLFLLLIYTFVFSVVFKARWGTDLHESKSQ
FATLLFVGMIVHGLFAETLNRAPGLILSNVSYVKKIVFPLEILPVVADGAALFHAIVSVLVLLIAFVLLNGYLQWTTVFL
PLILLPLLVLILGAAWALASLGVYLRDVAQPIGLIMTVLLFASPVFYPITALPERIRPWLMLNPLTFVIEQARAVLIFGQ
LPDWVGLAAYSLVSVFIAWVGYAWFQKTRKGFANVL

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30775; Mature: 30775

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHAAKPISLASLARSMWSNRQLILQMTKRDVIGRYKGSVMGVMWSLFNPLFLLLIYTF
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSVVFKARWGTDLHESKSQFATLLFVGMIVHGLFAETLNRAPGLILSNVSYVKKIVFPL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EILPVVADGAALFHAIVSVLVLLIAFVLLNGYLQWTTVFLPLILLPLLVLILGAAWALAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVYLRDVAQPIGLIMTVLLFASPVFYPITALPERIRPWLMLNPLTFVIEQARAVLIFGQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECC
LPDWVGLAAYSLVSVFIAWVGYAWFQKTRKGFANVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]