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The map label for this gene is qseC [H]

Identifier: 91789820

GI number: 91789820

Start: 4173061

End: 4174689

Strand: Reverse

Name: qseC [H]

Synonym: Bpro_3980

Alternate gene names: 91789820

Gene position: 4174689-4173061 (Counterclockwise)

Preceding gene: 91789821

Following gene: 91789819

Centisome position: 80.28

GC content: 66.36

Gene sequence:

>1629_bases
ATGAGCTCCCCCGGCCGTGCCTGGTTTGCCCGGTTAAGCGACCTGGTACGCCACCTGAGTAGTGGTCTGAATACTGGCCT
GAAGAGCCGCCTTCACGCCAGCGCTTTCCATGTCGTCAACAGCCGGCTGATGCCCGCCGCCATGAAGTCGGGCCTGCAGC
GCAGGTTGCTGCTGCTGCTGCTCGTTCCGCTTGGTATTTTTGCACTGGTGAGTATTTACTTTGACTACCAGACCGCTGGC
AACGTGGCCTTGCAAAAAGACGAGCAACTGCTGCGGCTGATTCCCCTGCTGACCGATTCGGTAGTGGCGCCCGGTGCCAC
GCCGGACAGCGCGCCGGTGCTGCTGCTCGCCCCCGCACTGGAGGACTTCATCAAGGGTCTTGCCGGCTCCGCGGGCTTTC
GCATTTCCGATGCCAAGGGCGGGTTTCTGGCGGGCGACCCCTGGATCGCCGACATCCTGCCGGCGACCCGTGAGCCGGAG
TTTCACAGCATGGAGGACGGCGGCGTGACTTACCGCATTGCGGTGCAGCGCGTGAACACCGTGGCCGGCGAGCTGATCGT
GCAGCTGGCCGACGGCTCGGACCCGCGCCAGCAGTGGGTGCGCTCCATCCTGCTCAAGGTGCTGTTGCCCAATTTCATTC
TGGTGGTGGCGGCGGGGTTTGCCGTCAACTGGGCCGTCACGCGCGCGCTCAAGCCGCTGATTGATTTGAAGGAAGCCGTG
GAGCGCCGCAGCCCGCGGGACCTGAGCGCCATCGACCCGCTCACCACGCCGGCCGAGGTGCAGCCGCTGGTGAGCGCCCT
GAATCGCCTGTTTGGCCTCGTCAATGACCAGGCCGACGGACAGCGTCGCTTTGTCGCCGACGCTGCGCACCAGTTGCGTA
CTCCGCTGGCCGGGCTGCAGGCCCAAGTCGAGGCGTGGGCGCAGGCCGCGCGGGCCAAAGGGGCGGACGGCGCCATCCTG
CTGTCTGCCGACAAGATCATCAAGCTGCGCAGCGCCACGAGGCGTACCTCGCAACTGGCCAACCAGTTGCTGGCACTGTC
GCGCGCTGACGCGTCGGCCATGGGCGCCCAGCCCACGCAGCGGGTGGACCTCAAGGACCTGTGCGAATCGATTTTGCCCC
TGCATCTGGATGCCGCTACTGGCAAAGGCATAGACCTGGGGCTGGACGCCCGCTCTGCGCAAGTGAACGGCTACGAGTGG
CTGCTGCGGGAACTGCTGGGCAATCTGGTGGACAACGCCGTCAAATACACCCCGCCCGGCGGCACGGTGACGATTCGCTG
CGGCCTTCTTCCCGCTTCGGGTGATCAGGCCCCTGACACGCACCCGCCGCGCGCGGCTGAAGGTGAGGGTGAGGCCAACG
GCGTGCATCGGCGCTGGGGCGTTTTTCTGGAAGTGGAAGACGACGGGCCCGGCATTGCCCCCGAGGAGCGCGCCAAGGCC
TTGCAGCGCTTTTACCGCGTGCGGGGCACGGTCGGTGAGGGCAACGGCCTGGGACTGGCGATTGCCGATGAGATCGCCCG
TGTGCACCATTCGCAGCTGGAGCTGGACTATGCCTGCCAAGGCACTGGTGGAGATGCAGGTGATGCGGCGCAAGGCCCGC
GCGGTTTGCGGGTGCGCCTGCGTCTGTAG

Upstream 100 bases:

>100_bases
CTGGAGCCGCATGGCATTGCCGTGCGCTCCATCCGGGGTTTTGGTTACCGCCTGGAGTTGCGCGAGGTTTCGCCAGGTGC
CGGTGTGGAGTAGTGTGCGT

Downstream 100 bases:

>100_bases
TTCTTTGGCGTGGTGCGAGGTCTCGCTGTTGCAGAATTGCTGAACTGGCCATTTTGGCGCTGCGCCATTCACGACGACCC
GCGCAGCAGGCCGGGAGTTG

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MSSPGRAWFARLSDLVRHLSSGLNTGLKSRLHASAFHVVNSRLMPAAMKSGLQRRLLLLLLVPLGIFALVSIYFDYQTAG
NVALQKDEQLLRLIPLLTDSVVAPGATPDSAPVLLLAPALEDFIKGLAGSAGFRISDAKGGFLAGDPWIADILPATREPE
FHSMEDGGVTYRIAVQRVNTVAGELIVQLADGSDPRQQWVRSILLKVLLPNFILVVAAGFAVNWAVTRALKPLIDLKEAV
ERRSPRDLSAIDPLTTPAEVQPLVSALNRLFGLVNDQADGQRRFVADAAHQLRTPLAGLQAQVEAWAQAARAKGADGAIL
LSADKIIKLRSATRRTSQLANQLLALSRADASAMGAQPTQRVDLKDLCESILPLHLDAATGKGIDLGLDARSAQVNGYEW
LLRELLGNLVDNAVKYTPPGGTVTIRCGLLPASGDQAPDTHPPRAAEGEGEANGVHRRWGVFLEVEDDGPGIAPEERAKA
LQRFYRVRGTVGEGNGLGLAIADEIARVHHSQLELDYACQGTGGDAGDAAQGPRGLRVRLRL

Sequences:

>Translated_542_residues
MSSPGRAWFARLSDLVRHLSSGLNTGLKSRLHASAFHVVNSRLMPAAMKSGLQRRLLLLLLVPLGIFALVSIYFDYQTAG
NVALQKDEQLLRLIPLLTDSVVAPGATPDSAPVLLLAPALEDFIKGLAGSAGFRISDAKGGFLAGDPWIADILPATREPE
FHSMEDGGVTYRIAVQRVNTVAGELIVQLADGSDPRQQWVRSILLKVLLPNFILVVAAGFAVNWAVTRALKPLIDLKEAV
ERRSPRDLSAIDPLTTPAEVQPLVSALNRLFGLVNDQADGQRRFVADAAHQLRTPLAGLQAQVEAWAQAARAKGADGAIL
LSADKIIKLRSATRRTSQLANQLLALSRADASAMGAQPTQRVDLKDLCESILPLHLDAATGKGIDLGLDARSAQVNGYEW
LLRELLGNLVDNAVKYTPPGGTVTIRCGLLPASGDQAPDTHPPRAAEGEGEANGVHRRWGVFLEVEDDGPGIAPEERAKA
LQRFYRVRGTVGEGNGLGLAIADEIARVHHSQLELDYACQGTGGDAGDAAQGPRGLRVRLRL
>Mature_541_residues
SSPGRAWFARLSDLVRHLSSGLNTGLKSRLHASAFHVVNSRLMPAAMKSGLQRRLLLLLLVPLGIFALVSIYFDYQTAGN
VALQKDEQLLRLIPLLTDSVVAPGATPDSAPVLLLAPALEDFIKGLAGSAGFRISDAKGGFLAGDPWIADILPATREPEF
HSMEDGGVTYRIAVQRVNTVAGELIVQLADGSDPRQQWVRSILLKVLLPNFILVVAAGFAVNWAVTRALKPLIDLKEAVE
RRSPRDLSAIDPLTTPAEVQPLVSALNRLFGLVNDQADGQRRFVADAAHQLRTPLAGLQAQVEAWAQAARAKGADGAILL
SADKIIKLRSATRRTSQLANQLLALSRADASAMGAQPTQRVDLKDLCESILPLHLDAATGKGIDLGLDARSAQVNGYEWL
LRELLGNLVDNAVKYTPPGGTVTIRCGLLPASGDQAPDTHPPRAAEGEGEANGVHRRWGVFLEVEDDGPGIAPEERAKAL
QRFYRVRGTVGEGNGLGLAIADEIARVHHSQLELDYACQGTGGDAGDAAQGPRGLRVRLRL

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=323, Percent_Identity=32.1981424148607, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1786783, Length=433, Percent_Identity=24.9422632794457, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1790551, Length=332, Percent_Identity=29.5180722891566, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1786600, Length=249, Percent_Identity=31.7269076305221, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788393, Length=288, Percent_Identity=26.0416666666667, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1789808, Length=336, Percent_Identity=25.5952380952381, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790861, Length=335, Percent_Identity=25.0746268656716, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 57985; Mature: 57854

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPGRAWFARLSDLVRHLSSGLNTGLKSRLHASAFHVVNSRLMPAAMKSGLQRRLLLLL
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPLGIFALVSIYFDYQTAGNVALQKDEQLLRLIPLLTDSVVAPGATPDSAPVLLLAPAL
HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHH
EDFIKGLAGSAGFRISDAKGGFLAGDPWIADILPATREPEFHSMEDGGVTYRIAVQRVNT
HHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHH
VAGELIVQLADGSDPRQQWVRSILLKVLLPNFILVVAAGFAVNWAVTRALKPLIDLKEAV
HHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERRSPRDLSAIDPLTTPAEVQPLVSALNRLFGLVNDQADGQRRFVADAAHQLRTPLAGLQ
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHH
AQVEAWAQAARAKGADGAILLSADKIIKLRSATRRTSQLANQLLALSRADASAMGAQPTQ
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
RVDLKDLCESILPLHLDAATGKGIDLGLDARSAQVNGYEWLLRELLGNLVDNAVKYTPPG
CCCHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCC
GTVTIRCGLLPASGDQAPDTHPPRAAEGEGEANGVHRRWGVFLEVEDDGPGIAPEERAKA
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEECCCCCCCHHHHHHH
LQRFYRVRGTVGEGNGLGLAIADEIARVHHSQLELDYACQGTGGDAGDAAQGPRGLRVRL
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEE
RL
EC
>Mature Secondary Structure 
SSPGRAWFARLSDLVRHLSSGLNTGLKSRLHASAFHVVNSRLMPAAMKSGLQRRLLLLL
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPLGIFALVSIYFDYQTAGNVALQKDEQLLRLIPLLTDSVVAPGATPDSAPVLLLAPAL
HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHH
EDFIKGLAGSAGFRISDAKGGFLAGDPWIADILPATREPEFHSMEDGGVTYRIAVQRVNT
HHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHH
VAGELIVQLADGSDPRQQWVRSILLKVLLPNFILVVAAGFAVNWAVTRALKPLIDLKEAV
HHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERRSPRDLSAIDPLTTPAEVQPLVSALNRLFGLVNDQADGQRRFVADAAHQLRTPLAGLQ
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHH
AQVEAWAQAARAKGADGAILLSADKIIKLRSATRRTSQLANQLLALSRADASAMGAQPTQ
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
RVDLKDLCESILPLHLDAATGKGIDLGLDARSAQVNGYEWLLRELLGNLVDNAVKYTPPG
CCCHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCC
GTVTIRCGLLPASGDQAPDTHPPRAAEGEGEANGVHRRWGVFLEVEDDGPGIAPEERAKA
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEECCCCCCCHHHHHHH
LQRFYRVRGTVGEGNGLGLAIADEIARVHHSQLELDYACQGTGGDAGDAAQGPRGLRVRL
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEE
RL
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]