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The map label for this gene is slmA [H]

Identifier: 91789819

GI number: 91789819

Start: 4172241

End: 4172891

Strand: Reverse

Name: slmA [H]

Synonym: Bpro_3979

Alternate gene names: 91789819

Gene position: 4172891-4172241 (Counterclockwise)

Preceding gene: 91789820

Following gene: 91789816

Centisome position: 80.24

GC content: 63.13

Gene sequence:

>651_bases
ATGTCCGACTTAGCGTCTGAATCCGAACTGAGCCCGAACGCCACGCCAGCTTCTGCCGAGTCCGCCGTGCGCAAGCGTCC
CAAGCCGGGTGAGCGCCGGGTCCAGATCCTTCAGGCACTGGCCACCATGCTGGAGCAGCCGGGTGCAGAACGCATCACAA
CGTCGGCGCTGGCGGCCAGGCTGGAGGTGAGCGAGGCGGCCCTGTACCGGCATTTCGCCAGCAAGGCGCAGATGTTTGAA
GGGCTGATCGAGTTCATCGAACAAACCGTGTTCACGCTGGTCAACCAGATCGGCGAGCGCGAGACAGACCATGCGGCGCG
CACCCGCAAACTCGTGGTGATGGTGCTGCAGTTTGCCGAAAAGAATCCGGGCATGACACGTGTGATGGTGGGCGATGCAC
TGGTGTTTGAAAATGACCGGTTGCAAGAGCGCATGAACCAGTTCTTCGACAAGCTCGAGTCCAGCCTCAAGCAGAGCCTG
CGCGACGCAGCGGCCGCCAGCGGCGCCGCCACGCCCACGGTCGATGCTCAGGTGCGTGCCTCGGTGATCGTGGCCTTCAT
GGTCGGCCGTTTGCAGCGCTTTGCCCGCTCGGGCTTCAAGCGCCTGCCGTCGGAGCATCTCGAAGCCAGCCTGGCCAGTA
TATTGGGCTAA

Upstream 100 bases:

>100_bases
CACGACGACCCGCGCAGCAGGCCGGGAGTTGCCATCCGGCTGTGAGAGAATCAATTGCAACGATCCCCGGTTTTTTGAAA
CATTCTTCATACCGCCACTT

Downstream 100 bases:

>100_bases
CCCCTATCGGACGCGCACTTCGTGTCGCGCCTTTTCCCCTTCCAGGGGACGGCGCCTGCGGCCGGGCAAAGCCCGTTCCG
CGGCCCCAGCTGGCAAGCCC

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSDLASESELSPNATPASAESAVRKRPKPGERRVQILQALATMLEQPGAERITTSALAARLEVSEAALYRHFASKAQMFE
GLIEFIEQTVFTLVNQIGERETDHAARTRKLVVMVLQFAEKNPGMTRVMVGDALVFENDRLQERMNQFFDKLESSLKQSL
RDAAAASGAATPTVDAQVRASVIVAFMVGRLQRFARSGFKRLPSEHLEASLASILG

Sequences:

>Translated_216_residues
MSDLASESELSPNATPASAESAVRKRPKPGERRVQILQALATMLEQPGAERITTSALAARLEVSEAALYRHFASKAQMFE
GLIEFIEQTVFTLVNQIGERETDHAARTRKLVVMVLQFAEKNPGMTRVMVGDALVFENDRLQERMNQFFDKLESSLKQSL
RDAAAASGAATPTVDAQVRASVIVAFMVGRLQRFARSGFKRLPSEHLEASLASILG
>Mature_215_residues
SDLASESELSPNATPASAESAVRKRPKPGERRVQILQALATMLEQPGAERITTSALAARLEVSEAALYRHFASKAQMFEG
LIEFIEQTVFTLVNQIGERETDHAARTRKLVVMVLQFAEKNPGMTRVMVGDALVFENDRLQERMNQFFDKLESSLKQSLR
DAAAASGAATPTVDAQVRASVIVAFMVGRLQRFARSGFKRLPSEHLEASLASILG

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=179, Percent_Identity=50.8379888268156, Blast_Score=160, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23719; Mature: 23588

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLASESELSPNATPASAESAVRKRPKPGERRVQILQALATMLEQPGAERITTSALAAR
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEVSEAALYRHFASKAQMFEGLIEFIEQTVFTLVNQIGERETDHAARTRKLVVMVLQFAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KNPGMTRVMVGDALVFENDRLQERMNQFFDKLESSLKQSLRDAAAASGAATPTVDAQVRA
CCCCCEEEHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SVIVAFMVGRLQRFARSGFKRLPSEHLEASLASILG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLASESELSPNATPASAESAVRKRPKPGERRVQILQALATMLEQPGAERITTSALAAR
CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEVSEAALYRHFASKAQMFEGLIEFIEQTVFTLVNQIGERETDHAARTRKLVVMVLQFAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KNPGMTRVMVGDALVFENDRLQERMNQFFDKLESSLKQSLRDAAAASGAATPTVDAQVRA
CCCCCEEEHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SVIVAFMVGRLQRFARSGFKRLPSEHLEASLASILG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA