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The map label for this gene is qseB [H]

Identifier: 91789821

GI number: 91789821

Start: 4174697

End: 4175389

Strand: Reverse

Name: qseB [H]

Synonym: Bpro_3981

Alternate gene names: 91789821

Gene position: 4175389-4174697 (Counterclockwise)

Preceding gene: 91789822

Following gene: 91789820

Centisome position: 80.29

GC content: 67.1

Gene sequence:

>693_bases
ATGAGACTCCTGCTTGTTGAAGACGATGTGATGCTGGCCAGCGGCATCAAGCTGGGGCTCAGCGACGCCGGATATGCGGT
CGACTGGGTCGGCAGCGCCGAGCGCGCCGAAGAGGTGTTGCAGGGCGAGACCTTCGATGCCGCCATCATTGACATCGGCC
TGCCCCGGCTCGACGGGCTGGAACTCACGCGGCGCCTGAGGCGCGGCGGCTTGGCCATGCCGGTGCTCATTCTGACGGCG
CGCGATGCGCTGCAGGATCGCGTGCAGGGGCTGGACATCGGCGCTGACGACTACATGGTCAAGCCCTTTGAGCTGCCCGA
GCTGCTGGCGCGCCTGCGCGCCTTGCTGCGCCGCTCGCAGGCCGCCACCAGCGCCACCCTGAGCTTTGGTGCGCTGGAGC
TGGACACGGCCAACCGCCAGGCCCACGCCAACGGCCAGCTGATCGAGCTGGGCCCGCGCGAATGGACCGTGATGGAGTAC
CTGCTGATCAATGCCCCCAAGCCCGCCAGCAAGGACAAGCTGCTGCAGGCCCTGACCGGCTGGGACAAGGAGATCACGCC
CAACGCCATCGAGGTCTATATCTCGCGCCTGCGCGGCAAGCTGGAGCCGCATGGCATTGCCGTGCGCTCCATCCGGGGTT
TTGGTTACCGCCTGGAGTTGCGCGAGGTTTCGCCAGGTGCCGGTGTGGAGTAG

Upstream 100 bases:

>100_bases
GGACCCTTCTCAAGCAGCCACCGTGGAACCGGCTTTGCCGGGCCACAGGTGGCGCCCCCTTGAGGGGGAGGCGCCGAAGG
CGCTTCGGGGGGGAGCCTAG

Downstream 100 bases:

>100_bases
TGTGCGTATGAGCTCCCCCGGCCGTGCCTGGTTTGCCCGGTTAAGCGACCTGGTACGCCACCTGAGTAGTGGTCTGAATA
CTGGCCTGAAGAGCCGCCTT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRLLLVEDDVMLASGIKLGLSDAGYAVDWVGSAERAEEVLQGETFDAAIIDIGLPRLDGLELTRRLRRGGLAMPVLILTA
RDALQDRVQGLDIGADDYMVKPFELPELLARLRALLRRSQAATSATLSFGALELDTANRQAHANGQLIELGPREWTVMEY
LLINAPKPASKDKLLQALTGWDKEITPNAIEVYISRLRGKLEPHGIAVRSIRGFGYRLELREVSPGAGVE

Sequences:

>Translated_230_residues
MRLLLVEDDVMLASGIKLGLSDAGYAVDWVGSAERAEEVLQGETFDAAIIDIGLPRLDGLELTRRLRRGGLAMPVLILTA
RDALQDRVQGLDIGADDYMVKPFELPELLARLRALLRRSQAATSATLSFGALELDTANRQAHANGQLIELGPREWTVMEY
LLINAPKPASKDKLLQALTGWDKEITPNAIEVYISRLRGKLEPHGIAVRSIRGFGYRLELREVSPGAGVE
>Mature_230_residues
MRLLLVEDDVMLASGIKLGLSDAGYAVDWVGSAERAEEVLQGETFDAAIIDIGLPRLDGLELTRRLRRGGLAMPVLILTA
RDALQDRVQGLDIGADDYMVKPFELPELLARLRALLRRSQAATSATLSFGALELDTANRQAHANGQLIELGPREWTVMEY
LLINAPKPASKDKLLQALTGWDKEITPNAIEVYISRLRGKLEPHGIAVRSIRGFGYRLELREVSPGAGVE

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=44.4954128440367, Blast_Score=183, Evalue=7e-48,
Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=42.9223744292237, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=40, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=35.1111111111111, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=34.6666666666667, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=32, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=34.841628959276, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=34.9344978165939, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=33.7837837837838, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=31.8385650224215, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=31.7596566523605, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1787229, Length=208, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=29.7413793103448, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1790437, Length=159, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787487, Length=177, Percent_Identity=28.8135593220339, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25238; Mature: 25238

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVEDDVMLASGIKLGLSDAGYAVDWVGSAERAEEVLQGETFDAAIIDIGLPRLDGL
CEEEEEECCEEEECCCEECCCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCHH
ELTRRLRRGGLAMPVLILTARDALQDRVQGLDIGADDYMVKPFELPELLARLRALLRRSQ
HHHHHHHHCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH
AATSATLSFGALELDTANRQAHANGQLIELGPREWTVMEYLLINAPKPASKDKLLQALTG
HHHHHHEECCEEEECCCCCCCCCCCCEEEECCCCHHEEHHHEECCCCCCCHHHHHHHHHC
WDKEITPNAIEVYISRLRGKLEPHGIAVRSIRGFGYRLELREVSPGAGVE
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MRLLLVEDDVMLASGIKLGLSDAGYAVDWVGSAERAEEVLQGETFDAAIIDIGLPRLDGL
CEEEEEECCEEEECCCEECCCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCHH
ELTRRLRRGGLAMPVLILTARDALQDRVQGLDIGADDYMVKPFELPELLARLRALLRRSQ
HHHHHHHHCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH
AATSATLSFGALELDTANRQAHANGQLIELGPREWTVMEYLLINAPKPASKDKLLQALTG
HHHHHHEECCEEEECCCCCCCCCCCCEEEECCCCHHEEHHHEECCCCCCCHHHHHHHHHC
WDKEITPNAIEVYISRLRGKLEPHGIAVRSIRGFGYRLELREVSPGAGVE
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]