The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is phbB [H]

Identifier: 91789809

GI number: 91789809

Start: 4162143

End: 4162904

Strand: Direct

Name: phbB [H]

Synonym: Bpro_3969

Alternate gene names: 91789809

Gene position: 4162143-4162904 (Clockwise)

Preceding gene: 91789808

Following gene: 91789817

Centisome position: 80.04

GC content: 64.83

Gene sequence:

>762_bases
ATGTCTTTCAACATCATGACTCCCCCCATTCAGGACCAGGTCGCCCTCGTCACCGGCGCCAACGCCGGCATGGGCCTGGC
CACCGTCCGCGCCCTGCTCGACGCAGGCTACCGTGTGGCCGCCACCGACTTGCGGACCGACCAGGTCGCCAGCTTGCTGG
CAGCGCACGACGACCGGCTGGCCTGCTTCACCATGGACGTGAGCGACCAGGCCCAGGTGCATGCGGCCTGCGACCAGATC
GAGGCGCGTTTTGGCCGCATCGATGTGTGCGTGAACAATGCCGGTTTCCTGCAGTACGCCAACTGCGAACAGACCACCCC
CGAACTCTGGCGCAAGACCCTGAGCATCAACCTCGACGGCGTGTTTTACGTGAGCCAGCGCGTGGCGCCGGGCATGAAGG
CACGCGGCTTTGGCCGCATCGTCAACGTGTCGTCCTACGGCGCCAAAACCGGCGGTCTGTCGCCGCTGCCGGCCTACGCG
GCCAGCAAGGGCGGCGTGATTTCGCTGACCTTCAGCTTCGCGCGCGAATACGCCCCGTTTGGTGTGACCTGCAACGCCCT
GGCCCCGACCTTCGTCAAGACCCAGATGCTGACCGAACAGGTCAGCGCCGAGCGGCAAGCCGAGCTGCGCCAGAAAATCC
CGGTGGGCCGCTTTTGCGAGCTCGAGGAATTTGCCCATAGTGTGCTGTTTCTGGCGCATCCCTTAAGCGGTTTCATCACC
GGCGAGGTGCTGGACCTCAACGGCGGCCTGCAGTTCGATTGA

Upstream 100 bases:

>100_bases
GATGGTTGCCGCCGGCCGCAAGGTCGGTGCGACCCTGCAGGACTGATTTCCACAGCCCCACCATTCAGCCGAAAACACTT
TTTCATCAAATACTTTTCAA

Downstream 100 bases:

>100_bases
GTGAGCCCGCGCCTGTTCGCACCCCGACCGCGGTGCGAACAGGCCGCAGCGGTGCGTGCGGCGCAACCCGTGCGCCGAGT
CCCGGCAAGGACTCAGTCTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSFNIMTPPIQDQVALVTGANAGMGLATVRALLDAGYRVAATDLRTDQVASLLAAHDDRLACFTMDVSDQAQVHAACDQI
EARFGRIDVCVNNAGFLQYANCEQTTPELWRKTLSINLDGVFYVSQRVAPGMKARGFGRIVNVSSYGAKTGGLSPLPAYA
ASKGGVISLTFSFAREYAPFGVTCNALAPTFVKTQMLTEQVSAERQAELRQKIPVGRFCELEEFAHSVLFLAHPLSGFIT
GEVLDLNGGLQFD

Sequences:

>Translated_253_residues
MSFNIMTPPIQDQVALVTGANAGMGLATVRALLDAGYRVAATDLRTDQVASLLAAHDDRLACFTMDVSDQAQVHAACDQI
EARFGRIDVCVNNAGFLQYANCEQTTPELWRKTLSINLDGVFYVSQRVAPGMKARGFGRIVNVSSYGAKTGGLSPLPAYA
ASKGGVISLTFSFAREYAPFGVTCNALAPTFVKTQMLTEQVSAERQAELRQKIPVGRFCELEEFAHSVLFLAHPLSGFIT
GEVLDLNGGLQFD
>Mature_252_residues
SFNIMTPPIQDQVALVTGANAGMGLATVRALLDAGYRVAATDLRTDQVASLLAAHDDRLACFTMDVSDQAQVHAACDQIE
ARFGRIDVCVNNAGFLQYANCEQTTPELWRKTLSINLDGVFYVSQRVAPGMKARGFGRIVNVSSYGAKTGGLSPLPAYAA
SKGGVISLTFSFAREYAPFGVTCNALAPTFVKTQMLTEQVSAERQAELRQKIPVGRFCELEEFAHSVLFLAHPLSGFITG
EVLDLNGGLQFD

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=34.7826086956522, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=34.2857142857143, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI19923817, Length=253, Percent_Identity=31.2252964426877, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI7705925, Length=236, Percent_Identity=34.3220338983051, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=30.7086614173228, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI66933014, Length=219, Percent_Identity=26.9406392694064, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=29.4573643410853, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI31542939, Length=217, Percent_Identity=34.5622119815668, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=29.0322580645161, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI19743808, Length=208, Percent_Identity=31.25, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI83715985, Length=257, Percent_Identity=28.7937743190661, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=25.5905511811024, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI224922801, Length=176, Percent_Identity=34.6590909090909, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI22507405, Length=208, Percent_Identity=27.4038461538462, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503301, Length=206, Percent_Identity=24.7572815533981, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4504505, Length=251, Percent_Identity=30.2788844621514, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI150247226, Length=197, Percent_Identity=31.9796954314721, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI40548397, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010158, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010156, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22758144, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI109715829, Length=195, Percent_Identity=26.1538461538462, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI210032110, Length=189, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI7706318, Length=208, Percent_Identity=25.9615384615385, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI142976729, Length=191, Percent_Identity=24.0837696335079, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI223718074, Length=212, Percent_Identity=31.6037735849057, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI209862901, Length=213, Percent_Identity=30.0469483568075, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI19923983, Length=213, Percent_Identity=30.0469483568075, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4503817, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=34.156378600823, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=30.327868852459, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=33.4710743801653, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=32.5301204819277, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790717, Length=239, Percent_Identity=29.7071129707113, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=32.2448979591837, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=29.718875502008, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=26.8292682926829, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=27.906976744186, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=25.8964143426295, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787820, Length=166, Percent_Identity=31.9277108433735, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI2367365, Length=236, Percent_Identity=26.271186440678, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=24.8, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=34.6613545816733, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=33.8775510204082, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=30.3501945525292, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=28.4046692607004, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193203115, Length=258, Percent_Identity=25.968992248062, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=27.4900398406374, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193203117, Length=256, Percent_Identity=26.171875, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=28.90625, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=258, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=26.7441860465116, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=29.6442687747036, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=26.0536398467433, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=26.2886597938144, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17561272, Length=196, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=31.25, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=28.3950617283951, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=27.4809160305344, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=28.4046692607004, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17568967, Length=199, Percent_Identity=30.1507537688442, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=204, Percent_Identity=25.9803921568627, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=24.9027237354086, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=252, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=252, Percent_Identity=27.3809523809524, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=28.6259541984733, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=26.2548262548263, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=270, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=25.4681647940075, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=252, Percent_Identity=24.6031746031746, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=26.7441860465116, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=253, Percent_Identity=26.8774703557312, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=25.6916996047431, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=196, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=32.7868852459016, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=32.9166666666667, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=29.1338582677165, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=32.9365079365079, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=29.9212598425197, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=29.8804780876494, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24641232, Length=233, Percent_Identity=30.4721030042918, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=29.9610894941634, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007236, Length=197, Percent_Identity=30.4568527918782, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=27.3809523809524, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007238, Length=198, Percent_Identity=29.7979797979798, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24665243, Length=195, Percent_Identity=32.3076923076923, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221331218, Length=195, Percent_Identity=32.3076923076923, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI18859837, Length=187, Percent_Identity=33.1550802139037, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24665247, Length=196, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221331216, Length=196, Percent_Identity=32.1428571428571, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24663911, Length=232, Percent_Identity=29.7413793103448, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571387, Length=207, Percent_Identity=29.4685990338164, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24644337, Length=175, Percent_Identity=32.5714285714286, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI116007234, Length=200, Percent_Identity=29.5, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357673, Length=152, Percent_Identity=32.2368421052632, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281364494, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116007232, Length=181, Percent_Identity=30.939226519337, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011283
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.36 [H]

Molecular weight: Translated: 27248; Mature: 27117

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSFNIMTPPIQDQVALVTGANAGMGLATVRALLDAGYRVAATDLRTDQVASLLAAHDDRL
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCE
ACFTMDVSDQAQVHAACDQIEARFGRIDVCVNNAGFLQYANCEQTTPELWRKTLSINLDG
EEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCCHHHHHHHHEECCCE
VFYVSQRVAPGMKARGFGRIVNVSSYGAKTGGLSPLPAYAASKGGVISLTFSFAREYAPF
EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCEEEEEEHHHHHCCCC
GVTCNALAPTFVKTQMLTEQVSAERQAELRQKIPVGRFCELEEFAHSVLFLAHPLSGFIT
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEE
GEVLDLNGGLQFD
EEEEECCCCCCCC
>Mature Secondary Structure 
SFNIMTPPIQDQVALVTGANAGMGLATVRALLDAGYRVAATDLRTDQVASLLAAHDDRL
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCE
ACFTMDVSDQAQVHAACDQIEARFGRIDVCVNNAGFLQYANCEQTTPELWRKTLSINLDG
EEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCCHHHHHHHHEECCCE
VFYVSQRVAPGMKARGFGRIVNVSSYGAKTGGLSPLPAYAASKGGVISLTFSFAREYAPF
EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCEEEEEEHHHHHCCCC
GVTCNALAPTFVKTQMLTEQVSAERQAELRQKIPVGRFCELEEFAHSVLFLAHPLSGFIT
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEE
GEVLDLNGGLQFD
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7582015; 11481430 [H]