Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yrrI [H]

Identifier: 91789517

GI number: 91789517

Start: 3879100

End: 3880272

Strand: Reverse

Name: yrrI [H]

Synonym: Bpro_3669

Alternate gene names: 91789517

Gene position: 3880272-3879100 (Counterclockwise)

Preceding gene: 91789518

Following gene: 91789516

Centisome position: 74.62

GC content: 62.57

Gene sequence:

>1173_bases
ATGACTGAAGAAGCCGCAAAAGATACGCCGCTTGCCGAGACGGAGGCGGCGCTTTTGCCGGAGCCGGAACGGCTGCTGCT
GCACATGCCGGTAGACATCCGCAATGTCTCGCTGGTAATCCTGGCAGTGCTGGCCAGCCTGTTCATGCTCCATTGGGCCA
AGGCGGTCTTCATTCCCCTCATGCTCGGTCTCCTCTTCAGCTATGCGCTGTCGCCCGTGGTCAATTGGCTGGAACTCAAA
CGCGTGCCACGCTGGCTCAGTGCCGCGGTGCTGCTGCTGGCCATTCTGGGCGCGATCGGCTCGACTGCGTATTCGCTGCG
CAATGAGGCTTCGCAACTGCTGGAGTCGTTGCCGCTGGCGGCACAAAAATTCAGGCAGGCGGTGAAAACGCGTGCCGGCA
AGCCGGACGGCGCTCTGGAAAACGTGCAGAAAGCCGCCTCCCAGATCGAACAGGCGGCGCGTGAAAGTGGTACCGCCTCT
CCCGGATCATCCCGGGGCGCCATGCGGGTCGTCGTTGAGACGGCAACGTTCAATGTGCGGGACTATCTGTGGACAGGAAC
CCTCGGCCTGCTCACGCTGATAGGCCAGTTCACCGTGGTGGTTTTCCTGACCTACTTCCTGATGCTCTCCGGCGACACCT
TCTGCCGCAAGCTGATCAAGCTGGCACCCGGCTTCAGCAGCAAGAAAATCACGCTGCAGGCCCTGCATGAGATCACCGGG
CAGATCCAGCGCTACCTGCAGGTGCAGCTGCTGGCCAGTGCGTTGGTGGGGGTGCTGACCTGGCTGGCCCTGCTGATCAT
CGGACTGGACAACGCGGCAGTGTGGGGCATTGCCGCCGGTGTGCTGAACCTCGTGCCTTATGTGGGTTCGCTGGTGACGG
CGGGCGCGTCGGGGCTGGTGGGGTTTTTGCAGTTTGGTTCGCTCGACATGGCGATCGTGGTGGCCGGCGCCTCGCTGTTC
ATCCACATGCTGGTGGGCAACCTGTTCACCCCCTGGCTCACCAGCCGCGCCAGCCGCCTGAGCCCGGTAGCGGTGTTTGT
CGGGCTGCTGGCCTGGGGCTGGTTGTGGGGCGTGTGGGGCTTGTTGCTCGGCATACCCATTCTGATGATCGTCAAGTCCG
TGTGCGACCGGATCGATGACCTGAAACCCATTGGCGAGTTTCTGGGCTCTTAG

Upstream 100 bases:

>100_bases
GGCATAACGATGACGGGGGACTGCCCCACGCGGGTTTTTCGCGGGGTTTTGCTGGTACGACGGGCAAAGCCGGCAGCTGC
GGGGTCCATGAGGAGCAACA

Downstream 100 bases:

>100_bases
AAATGAGGCCCCCACGGTCGCTCACTGCGTGTAGCTCCCGAGGCCTTGCAGGCCGCGGCTCGCGAGACGCTTCGCCTCTG
TCGCCCGTCCAAGCCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTEEAAKDTPLAETEAALLPEPERLLLHMPVDIRNVSLVILAVLASLFMLHWAKAVFIPLMLGLLFSYALSPVVNWLELK
RVPRWLSAAVLLLAILGAIGSTAYSLRNEASQLLESLPLAAQKFRQAVKTRAGKPDGALENVQKAASQIEQAARESGTAS
PGSSRGAMRVVVETATFNVRDYLWTGTLGLLTLIGQFTVVVFLTYFLMLSGDTFCRKLIKLAPGFSSKKITLQALHEITG
QIQRYLQVQLLASALVGVLTWLALLIIGLDNAAVWGIAAGVLNLVPYVGSLVTAGASGLVGFLQFGSLDMAIVVAGASLF
IHMLVGNLFTPWLTSRASRLSPVAVFVGLLAWGWLWGVWGLLLGIPILMIVKSVCDRIDDLKPIGEFLGS

Sequences:

>Translated_390_residues
MTEEAAKDTPLAETEAALLPEPERLLLHMPVDIRNVSLVILAVLASLFMLHWAKAVFIPLMLGLLFSYALSPVVNWLELK
RVPRWLSAAVLLLAILGAIGSTAYSLRNEASQLLESLPLAAQKFRQAVKTRAGKPDGALENVQKAASQIEQAARESGTAS
PGSSRGAMRVVVETATFNVRDYLWTGTLGLLTLIGQFTVVVFLTYFLMLSGDTFCRKLIKLAPGFSSKKITLQALHEITG
QIQRYLQVQLLASALVGVLTWLALLIIGLDNAAVWGIAAGVLNLVPYVGSLVTAGASGLVGFLQFGSLDMAIVVAGASLF
IHMLVGNLFTPWLTSRASRLSPVAVFVGLLAWGWLWGVWGLLLGIPILMIVKSVCDRIDDLKPIGEFLGS
>Mature_389_residues
TEEAAKDTPLAETEAALLPEPERLLLHMPVDIRNVSLVILAVLASLFMLHWAKAVFIPLMLGLLFSYALSPVVNWLELKR
VPRWLSAAVLLLAILGAIGSTAYSLRNEASQLLESLPLAAQKFRQAVKTRAGKPDGALENVQKAASQIEQAARESGTASP
GSSRGAMRVVVETATFNVRDYLWTGTLGLLTLIGQFTVVVFLTYFLMLSGDTFCRKLIKLAPGFSSKKITLQALHEITGQ
IQRYLQVQLLASALVGVLTWLALLIIGLDNAAVWGIAAGVLNLVPYVGSLVTAGASGLVGFLQFGSLDMAIVVAGASLFI
HMLVGNLFTPWLTSRASRLSPVAVFVGLLAWGWLWGVWGLLLGIPILMIVKSVCDRIDDLKPIGEFLGS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=359, Percent_Identity=25.0696378830084, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788838, Length=193, Percent_Identity=28.4974093264249, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787885, Length=339, Percent_Identity=25.3687315634218, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41985; Mature: 41854

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEAAKDTPLAETEAALLPEPERLLLHMPVDIRNVSLVILAVLASLFMLHWAKAVFIPL
CCCCCCCCCCCCHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGLLFSYALSPVVNWLELKRVPRWLSAAVLLLAILGAIGSTAYSLRNEASQLLESLPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AQKFRQAVKTRAGKPDGALENVQKAASQIEQAARESGTASPGSSRGAMRVVVETATFNVR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHH
DYLWTGTLGLLTLIGQFTVVVFLTYFLMLSGDTFCRKLIKLAPGFSSKKITLQALHEITG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QIQRYLQVQLLASALVGVLTWLALLIIGLDNAAVWGIAAGVLNLVPYVGSLVTAGASGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GFLQFGSLDMAIVVAGASLFIHMLVGNLFTPWLTSRASRLSPVAVFVGLLAWGWLWGVWG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLGIPILMIVKSVCDRIDDLKPIGEFLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEEAAKDTPLAETEAALLPEPERLLLHMPVDIRNVSLVILAVLASLFMLHWAKAVFIPL
CCCCCCCCCCCHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGLLFSYALSPVVNWLELKRVPRWLSAAVLLLAILGAIGSTAYSLRNEASQLLESLPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AQKFRQAVKTRAGKPDGALENVQKAASQIEQAARESGTASPGSSRGAMRVVVETATFNVR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHH
DYLWTGTLGLLTLIGQFTVVVFLTYFLMLSGDTFCRKLIKLAPGFSSKKITLQALHEITG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QIQRYLQVQLLASALVGVLTWLALLIIGLDNAAVWGIAAGVLNLVPYVGSLVTAGASGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GFLQFGSLDMAIVVAGASLFIHMLVGNLFTPWLTSRASRLSPVAVFVGLLAWGWLWGVWG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLGIPILMIVKSVCDRIDDLKPIGEFLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]