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The map label for this gene is ygdQ [C]

Identifier: 91789516

GI number: 91789516

Start: 3878069

End: 3878848

Strand: Reverse

Name: ygdQ [C]

Synonym: Bpro_3668

Alternate gene names: 91789516

Gene position: 3878848-3878069 (Counterclockwise)

Preceding gene: 91789517

Following gene: 91789512

Centisome position: 74.59

GC content: 60.13

Gene sequence:

>780_bases
ATGATGGAGCTGCTCACCGACCCGCAAGCCTGGATTGCCTTTGCCACGCTCACCGCGCTGGAGCTGGTGCTGGGCATTGA
CAACATCGTGTTCATTTCGATTCTGGTCGACAAGCTGCCCAAGGCGCGGCAAGAAGTGGCGCGCCGTCTGGGTCTGTTCA
TGGCCATGTTCATACGTGTCGGGCTGCTCATGGTGCTGTCGTGGATTGTGGGTCTGACAGCGCCGGTGTTTACCGTGATC
GGCCAGGAAATTTCAGGACGCGACCTGATCCTGATATGTGGCGGCCTGTTCCTCATCTGGAAGAGCACCGGGGAAATTCA
CCAGTCGCTGGAAGGCGAGGAAGGCCACGCCTCCAGTGCGGTGCAGGCCACGTTTGCCGCTGTCATTGTGCAGATCATGG
TGGTGGACATGGTTTTTTCGCTGGACTCCATCATCACGGCCGTGGGGATGGTGGACAGCCTGCCGGTGATGATCGCCGCC
GTCATTGTCTCGGTCGGCCTGATGATGCTGTTTGCCGGCGCCATTGGGCGCTTTGTGTCTGACCACCCGACCATCAAGAT
GCTGGCACTGTCGTTCCTGGTCGTGGTCGGTGTGGTGCTGATTGCGGAAGGTTTCGAGTACCACGTACCCAAGGGCTTTG
TGTACTTTGCGATGGCCTTCTCGCTGTCGGTGGAGATGCTCAATATCCGCATGCGCCGCAAGTCCGCCACGCCGGCGCAT
CTGCACGCGGCCTACACGCGCGAAAAGGCGGCGCAGACCGACCTGCCGGATCAAGGCTGA

Upstream 100 bases:

>100_bases
GGTCTGGCAAAGCCAGTCCCGCGGCCCCTACTGGTGTAAAACTTCTGCGGTCGCTACCATGGCCGCACTGGATCATTGAA
AAAAAGAAAGAGGCCATGCC

Downstream 100 bases:

>100_bases
CTTCGCCGCCACCGGGTGTGCTGGCCTGGCGCAGGTGGGAAGGGCCACCAGATCCCCTGCAAAGTGTCAGCTAAAGACAG
CCGCTGGCGTTAATGGGGCG

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MMELLTDPQAWIAFATLTALELVLGIDNIVFISILVDKLPKARQEVARRLGLFMAMFIRVGLLMVLSWIVGLTAPVFTVI
GQEISGRDLILICGGLFLIWKSTGEIHQSLEGEEGHASSAVQATFAAVIVQIMVVDMVFSLDSIITAVGMVDSLPVMIAA
VIVSVGLMMLFAGAIGRFVSDHPTIKMLALSFLVVVGVVLIAEGFEYHVPKGFVYFAMAFSLSVEMLNIRMRRKSATPAH
LHAAYTREKAAQTDLPDQG

Sequences:

>Translated_259_residues
MMELLTDPQAWIAFATLTALELVLGIDNIVFISILVDKLPKARQEVARRLGLFMAMFIRVGLLMVLSWIVGLTAPVFTVI
GQEISGRDLILICGGLFLIWKSTGEIHQSLEGEEGHASSAVQATFAAVIVQIMVVDMVFSLDSIITAVGMVDSLPVMIAA
VIVSVGLMMLFAGAIGRFVSDHPTIKMLALSFLVVVGVVLIAEGFEYHVPKGFVYFAMAFSLSVEMLNIRMRRKSATPAH
LHAAYTREKAAQTDLPDQG
>Mature_259_residues
MMELLTDPQAWIAFATLTALELVLGIDNIVFISILVDKLPKARQEVARRLGLFMAMFIRVGLLMVLSWIVGLTAPVFTVI
GQEISGRDLILICGGLFLIWKSTGEIHQSLEGEEGHASSAVQATFAAVIVQIMVVDMVFSLDSIITAVGMVDSLPVMIAA
VIVSVGLMMLFAGAIGRFVSDHPTIKMLALSFLVVVGVVLIAEGFEYHVPKGFVYFAMAFSLSVEMLNIRMRRKSATPAH
LHAAYTREKAAQTDLPDQG

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=231, Percent_Identity=57.1428571428571, Blast_Score=249, Evalue=9e-68,
Organism=Escherichia coli, GI1788119, Length=236, Percent_Identity=50, Blast_Score=240, Evalue=7e-65,
Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=47.8070175438597, Blast_Score=204, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 28123; Mature: 28123

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]