| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is purM [H]
Identifier: 91789420
GI number: 91789420
Start: 3765641
End: 3766681
Strand: Direct
Name: purM [H]
Synonym: Bpro_3566
Alternate gene names: 91789420
Gene position: 3765641-3766681 (Clockwise)
Preceding gene: 91789413
Following gene: 91789421
Centisome position: 72.41
GC content: 64.65
Gene sequence:
>1041_bases ATGACCACCTCCTCCTCTTCTCCCCTGAGCTACAAAGACGCCGGCGTTGACATTGACGCAGGCGACGCCCTGGTTGAACG CATCAAGCCGCTGGCCAAGAAAACCATGCGCGAAGGCGTGCTGGCCGGCATTGGCGGTTTTGGCGCGCTGTTTGAGGTGC CCAAGCGCTACAAGGAACCGGTGCTGGTGAGCGGCACGGACGGCGTGGGCACCAAGCTGCGCCTGGCCTTTGAATGGAAC ATGCACGATACCGTCGGCATCGACCTGGTGGCGATGAGCGTCAATGACGTACTGGTGCAAGGCGCCGAGCCGCTGTTTTT CCTGGATTACTTCGCCTGCGGCAAGCTCGATGTGGACACCGCCGCGGCGGTGGTCGGCGGCATTGCCAAAGGCTGCGAAT TGAGCGGTTGCGCGCTGATTGGCGGCGAAACCGCCGAAATGCCCGGCATGTACCCCGAGGGCGAGTACGACCTGGCCGGT TTTGCCGTGGGTGCCGTGGAAAAGTCGAAGATCCTGACCGGCAAGGAAGTGCAGCCCGGCGATGTGGTGCTGGGCCTGGC CAGCAGCGGCGTGCACTCCAACGGCTTCAGCCTGGTGCGCAAATGCATCGAGCGTGCCGGCGCCGACCGCCCCGCCACGC TGGACGGCAAGCCCTTCAAGCAGGCCCTGATGGAGCCGACCCGGCTGTACGTCAAAAACGTGCTGGCCGCGCTGGCCGCG CATCCGATCAAGGCGCTGGCCCACATCACCGGTGGCGGCCTGCTGGAAAACATCCCACGCGTGCTGCCCGAGGGCACGGC GGCCCACCTCAAAAAAGGCAGCTGGCCGCAAACGGAGCTGTTTGCCTGGCTGCAAAAGACGGCCGGCATCGATGACTTTG AGATGAACCGCACCTTCAACAACGGCATCGGCATGGTGGTCGTGGTGGATGCCGCCAACGCCCAGGCCACGGCCAAAACC CTGCGCGACGCCGGTGAACAGGTTTATGAGATTGGCGTGATTGCCCCCCGCGGCGAGGGCGCCGCCGTCATCGTCGGCTG A
Upstream 100 bases:
>100_bases AGAATCTAAGGCTGAATTCTATCGGGCTTGCAGGGCTGCTCCAGACTGCAGCCCCCGCCCACCCGACCGACCGCACCCCA TCGCATCAGAGCCCCACCCC
Downstream 100 bases:
>100_bases TCCGGCTGCGATGGCTGGCCGGCAACAAGCGCTTCCGGTAAAGCCCACGGCCCATGGCTGATAAACCCGGCCACTCGCAG CGTCTTCCGGCGGGCATCTG
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTTSSSSPLSYKDAGVDIDAGDALVERIKPLAKKTMREGVLAGIGGFGALFEVPKRYKEPVLVSGTDGVGTKLRLAFEWN MHDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDTAAAVVGGIAKGCELSGCALIGGETAEMPGMYPEGEYDLAG FAVGAVEKSKILTGKEVQPGDVVLGLASSGVHSNGFSLVRKCIERAGADRPATLDGKPFKQALMEPTRLYVKNVLAALAA HPIKALAHITGGGLLENIPRVLPEGTAAHLKKGSWPQTELFAWLQKTAGIDDFEMNRTFNNGIGMVVVVDAANAQATAKT LRDAGEQVYEIGVIAPRGEGAAVIVG
Sequences:
>Translated_346_residues MTTSSSSPLSYKDAGVDIDAGDALVERIKPLAKKTMREGVLAGIGGFGALFEVPKRYKEPVLVSGTDGVGTKLRLAFEWN MHDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDTAAAVVGGIAKGCELSGCALIGGETAEMPGMYPEGEYDLAG FAVGAVEKSKILTGKEVQPGDVVLGLASSGVHSNGFSLVRKCIERAGADRPATLDGKPFKQALMEPTRLYVKNVLAALAA HPIKALAHITGGGLLENIPRVLPEGTAAHLKKGSWPQTELFAWLQKTAGIDDFEMNRTFNNGIGMVVVVDAANAQATAKT LRDAGEQVYEIGVIAPRGEGAAVIVG >Mature_345_residues TTSSSSPLSYKDAGVDIDAGDALVERIKPLAKKTMREGVLAGIGGFGALFEVPKRYKEPVLVSGTDGVGTKLRLAFEWNM HDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDTAAAVVGGIAKGCELSGCALIGGETAEMPGMYPEGEYDLAGF AVGAVEKSKILTGKEVQPGDVVLGLASSGVHSNGFSLVRKCIERAGADRPATLDGKPFKQALMEPTRLYVKNVLAALAAH PIKALAHITGGGLLENIPRVLPEGTAAHLKKGSWPQTELFAWLQKTAGIDDFEMNRTFNNGIGMVVVVDAANAQATAKTL RDAGEQVYEIGVIAPRGEGAAVIVG
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=339, Percent_Identity=52.212389380531, Blast_Score=348, Evalue=4e-96, Organism=Homo sapiens, GI209869995, Length=339, Percent_Identity=52.212389380531, Blast_Score=348, Evalue=4e-96, Organism=Homo sapiens, GI209869993, Length=339, Percent_Identity=52.212389380531, Blast_Score=348, Evalue=4e-96, Organism=Escherichia coli, GI1788845, Length=346, Percent_Identity=57.514450867052, Blast_Score=397, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17567511, Length=344, Percent_Identity=45.9302325581395, Blast_Score=270, Evalue=6e-73, Organism=Saccharomyces cerevisiae, GI6321203, Length=348, Percent_Identity=48.2758620689655, Blast_Score=325, Evalue=8e-90, Organism=Drosophila melanogaster, GI24582400, Length=318, Percent_Identity=47.1698113207547, Blast_Score=247, Evalue=7e-66,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 36200; Mature: 36069
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSSSPLSYKDAGVDIDAGDALVERIKPLAKKTMREGVLAGIGGFGALFEVPKRYKEP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC VLVSGTDGVGTKLRLAFEWNMHDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDT EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHCCCCCEEEEHHHHCCCCCHHH AAAVVGGIAKGCELSGCALIGGETAEMPGMYPEGEYDLAGFAVGAVEKSKILTGKEVQPG HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCC DVVLGLASSGVHSNGFSLVRKCIERAGADRPATLDGKPFKQALMEPTRLYVKNVLAALAA CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HPIKALAHITGGGLLENIPRVLPEGTAAHLKKGSWPQTELFAWLQKTAGIDDFEMNRTFN HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEC NGIGMVVVVDAANAQATAKTLRDAGEQVYEIGVIAPRGEGAAVIVG CCCCEEEEEECCCCHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEC >Mature Secondary Structure TTSSSSPLSYKDAGVDIDAGDALVERIKPLAKKTMREGVLAGIGGFGALFEVPKRYKEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC VLVSGTDGVGTKLRLAFEWNMHDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDT EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHCCCCCEEEEHHHHCCCCCHHH AAAVVGGIAKGCELSGCALIGGETAEMPGMYPEGEYDLAGFAVGAVEKSKILTGKEVQPG HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCC DVVLGLASSGVHSNGFSLVRKCIERAGADRPATLDGKPFKQALMEPTRLYVKNVLAALAA CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HPIKALAHITGGGLLENIPRVLPEGTAAHLKKGSWPQTELFAWLQKTAGIDDFEMNRTFN HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEC NGIGMVVVVDAANAQATAKTLRDAGEQVYEIGVIAPRGEGAAVIVG CCCCEEEEEECCCCHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA