Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yajR [C]

Identifier: 91789421

GI number: 91789421

Start: 3766735

End: 3767943

Strand: Direct

Name: yajR [C]

Synonym: Bpro_3567

Alternate gene names: 91789421

Gene position: 3766735-3767943 (Clockwise)

Preceding gene: 91789420

Following gene: 91789424

Centisome position: 72.43

GC content: 67.41

Gene sequence:

>1209_bases
ATGGCTGATAAACCCGGCCACTCGCAGCGTCTTCCGGCGGGCATCTGGGCGCTGGGCTTTGTCAGCCTGCTCATGGACAT
TTCTTCCGAGATGATCCACAGCCTGCTGCCGGTCTTCATGGTCACGGTGCTGGGCACCAGCATGTGGGCCGTCGGCCTGA
TCGAGGGCTTTGCCGAAGCCACGGCGCTCATCGTCAAAGTGTTCTCGGGCGTGCTCAGCGACTACTGGGGAAAGCGCAAA
CCGCTGGCGGTGCTCGGCTACGGCCTGGGTGCGCTGTCGAAACCCCTCTTTGCCCTGGCCACGACCACCGGCATGGTGCT
GGCCGCCCGCCTGATCGACCGCGTCGGCAAAGGCCTGCGCGGCGCCCCGCGCGATGCACTGGTGGCCGATCTGGCGCCGC
CCAGCCTGCGCGGCGCGGCGTTCGGGCTGCGCCAGTCGCTCGATACCGTGGGGGCCTTTCTCGGTCCGCTCGTCGCCATG
GGCCTGATGCTGCTCTGGGCCAATGACTTTCGGGCCATTTTCTGGGTGGCCATCATTCCGGGCTTTCTGGCCGTGGCCCT
GCTGCTGTTCGGCGTGCGCGAGCCCGCGACAGGCAGGCAGGCACCGCGGCTCAACCCGATCAGCAAAGACAACCTGAAGC
GCCTGAGCGGACCGTACTGGCGGGTGGTTGCCATCGGCGCGGTGTTCACGCTGGCGCGCTTCAGTGAAGCGTTTTTACTG
CTGCGGGCGCTGCAGGGCGGCCTGCCGGTCGCCTACACGCCGCTGGTGCTGATCGGGATGAACGTGGTCTATGCCCTGGG
CGCCTACCCGTTTGGCAAGCTGTCGGACTCGGTGAGCCACACCACACTGCTGGCCTGGGGGCTGGTGGTGCTGATTGGCG
CCGATGTGCTGCTGGCCTCCAGCAGCCACTGGACCTGGCCAATGGCGTGGATAGGGGCCGGCATCGCGCTGTGGGGCCTG
CACATGGCCATGACCCAGGGTTTGCTGGCCACCATGGTGACCAACGCCGCACCGGCTGACCTGCGCGGCACGGCATTCGG
TTTTTTCAACCTGATGAGCGGCCTGGCAATGCTGCTGGCCAGCACGCTGGCCGGGGTGCTCTGGGACCAGCTCGGCGCAC
CGGTGACCTTTGCCGCTGGCGCGGCCTTCTGCCTGGTGGCGCTGGCCATGCTCTGGCGCTGGCGCGGCACCCAACTCTGG
AGCACCTGA

Upstream 100 bases:

>100_bases
GCGTGATTGCCCCCCGCGGCGAGGGCGCCGCCGTCATCGTCGGCTGATCCGGCTGCGATGGCTGGCCGGCAACAAGCGCT
TCCGGTAAAGCCCACGGCCC

Downstream 100 bases:

>100_bases
CAAAGGGAGAATGAGAGGACACGATCCTGAGGCGGTCACCGATCCCTTTGGCCGGCCGGGCGCCCCAGGTCAAGTCAGTG
TTTTCCCCGCAACTGGGACA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MADKPGHSQRLPAGIWALGFVSLLMDISSEMIHSLLPVFMVTVLGTSMWAVGLIEGFAEATALIVKVFSGVLSDYWGKRK
PLAVLGYGLGALSKPLFALATTTGMVLAARLIDRVGKGLRGAPRDALVADLAPPSLRGAAFGLRQSLDTVGAFLGPLVAM
GLMLLWANDFRAIFWVAIIPGFLAVALLLFGVREPATGRQAPRLNPISKDNLKRLSGPYWRVVAIGAVFTLARFSEAFLL
LRALQGGLPVAYTPLVLIGMNVVYALGAYPFGKLSDSVSHTTLLAWGLVVLIGADVLLASSSHWTWPMAWIGAGIALWGL
HMAMTQGLLATMVTNAAPADLRGTAFGFFNLMSGLAMLLASTLAGVLWDQLGAPVTFAAGAAFCLVALAMLWRWRGTQLW
ST

Sequences:

>Translated_402_residues
MADKPGHSQRLPAGIWALGFVSLLMDISSEMIHSLLPVFMVTVLGTSMWAVGLIEGFAEATALIVKVFSGVLSDYWGKRK
PLAVLGYGLGALSKPLFALATTTGMVLAARLIDRVGKGLRGAPRDALVADLAPPSLRGAAFGLRQSLDTVGAFLGPLVAM
GLMLLWANDFRAIFWVAIIPGFLAVALLLFGVREPATGRQAPRLNPISKDNLKRLSGPYWRVVAIGAVFTLARFSEAFLL
LRALQGGLPVAYTPLVLIGMNVVYALGAYPFGKLSDSVSHTTLLAWGLVVLIGADVLLASSSHWTWPMAWIGAGIALWGL
HMAMTQGLLATMVTNAAPADLRGTAFGFFNLMSGLAMLLASTLAGVLWDQLGAPVTFAAGAAFCLVALAMLWRWRGTQLW
ST
>Mature_401_residues
ADKPGHSQRLPAGIWALGFVSLLMDISSEMIHSLLPVFMVTVLGTSMWAVGLIEGFAEATALIVKVFSGVLSDYWGKRKP
LAVLGYGLGALSKPLFALATTTGMVLAARLIDRVGKGLRGAPRDALVADLAPPSLRGAAFGLRQSLDTVGAFLGPLVAMG
LMLLWANDFRAIFWVAIIPGFLAVALLLFGVREPATGRQAPRLNPISKDNLKRLSGPYWRVVAIGAVFTLARFSEAFLLL
RALQGGLPVAYTPLVLIGMNVVYALGAYPFGKLSDSVSHTTLLAWGLVVLIGADVLLASSSHWTWPMAWIGAGIALWGLH
MAMTQGLLATMVTNAAPADLRGTAFGFFNLMSGLAMLLASTLAGVLWDQLGAPVTFAAGAAFCLVALAMLWRWRGTQLWS
T

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42675; Mature: 42544

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ADKPGHSQRLPAGIWALGFVSLLMDISSEMIHSLLPVFMVTVLGTSMWAVGLIEGFAEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALIVKVFSGVLSDYWGKRKPLAVLGYGLGALSKPLFALATTTGMVLAARLIDRVGKGLR
HHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAPRDALVADLAPPSLRGAAFGLRQSLDTVGAFLGPLVAMGLMLLWANDFRAIFWVAIIP
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFLAVALLLFGVREPATGRQAPRLNPISKDNLKRLSGPYWRVVAIGAVFTLARFSEAFLL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LRALQGGLPVAYTPLVLIGMNVVYALGAYPFGKLSDSVSHTTLLAWGLVVLIGADVLLAS
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHEEC
SSHWTWPMAWIGAGIALWGLHMAMTQGLLATMVTNAAPADLRGTAFGFFNLMSGLAMLLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
STLAGVLWDQLGAPVTFAAGAAFCLVALAMLWRWRGTQLWST
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]