Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789361

Identifier: 91789361

GI number: 91789361

Start: 3706582

End: 3707952

Strand: Direct

Name: 91789361

Synonym: Bpro_3507

Alternate gene names: NA

Gene position: 3706582-3707952 (Clockwise)

Preceding gene: 91789360

Following gene: 91789362

Centisome position: 71.28

GC content: 62.58

Gene sequence:

>1371_bases
ATGCCGAAAACCATACGCTACACCCTGCTGTCGCTGCGCGATCTGGCGGTCTCTGCCGGTCCCTTCATTTTGCTGGCCGC
CACGCTGCTGGTGCTGGCCTACTGGTGGCTGGACCCCAACCCGCCCAAGCGGGTGGTACTGGCCACCGGCCCGGCACAAA
GCGCCTATGAAGAATTTGGCAAGCGCTACGCGCGCATTCTTGCGAAAGACGGCATCGAGGTCGTGCAGCTGCCTTCGGAA
GGGTCGGCAACCAATTTGCAGCTGCTGCGCGAGGGCAAGGCCGATCTCGGTTTTGTGCAGGGCGGCACCAGCGAGGCAGG
CATCGAAAATGACGGGCAGCTGGAATCGCTGGGCAGCCTGTTTCTGGAACCGGTGTGGCTGTTTTACCGGGAGGCGGCTG
CGCGCAAAGTCGCATCCGCAGCGCCGCGCGGCAATGCCTCGGCAGACGGTGCCGCCGCCGGCTCTACCCTCAGCGCCCTG
ACACAACTGCAAGGCTTGCGCGTCAACGTCGGCACACCCGGCAGCGGTGTGCCCAACCTGGTGAACAAATTGCTGGAGAG
CAACCGCATTGACAGCAGCACCCTGAAAATCTCCCGGCTGGAGCAGACCCCGGCCACCGTGGCCTTTCTGGGCGGCGAGC
TGGACGCCATTGTGTTCGCCTCGGCACCCGAATCGCTGATGGTGCAGATGCTGCTGCAGACACCCGGCGTCAAGCTGATG
GATTTTGCGCAAAGCGAAGCCTACTCGCGGCGCTTTGAGTTCCTGAGCCCCGCGGTGCTGCCGCGCGGCGTGGTGGATCT
GGCCACCAATATTCCGCCGCAGGATGTCCGCCTGGTGGCGCCCACCACCACCCTGCTCACGCGGGCCGGCACACACCCGG
CGCTGCTGCAGCTGTTTGCACTGGCCGGTAACGAGATCCACGGCAGTGCCGGCTGGTTCAAGCGGGCGCGCGAATACCCG
AATGTGAAGAACAACGAATTGCCGGTTGCCAAAGAAGCCGAGCGCAGCATTCAGGCCGGTGCGCCGCTGCTGCAGCGCTA
CCTGCCCTTCTGGGTGGCCAACCTGGTCGAGCGCATGTGGCTGGTCATGGGCATCATCATCGCGGTGCTGTTGCCGCTGT
CGCGCATTGTGCCGCCACTCTACGAGTTTCGAGTACGCTCGCGCATTTTCAGGTGGTATGGCCAGTTGCGTGATATTGAA
AGCCGCATTGAGAGCACGGGCGAAAACACGCGCAATAGCGCGCTGCTCGAAGAACTCAACAGCCTGGAAAATCGCGCTGA
AAAAATCAGCGTGCCGCTGTCATACACCGACGAGCTGTATGCGCTGCGCAGCAATATTCATCTGGTGAGGAAGAAGTTGC
AGAGGTTGTAG

Upstream 100 bases:

>100_bases
CATAGCTAATAGCCTATATTTTTTCTGGTCTTCAGGTGTTTTTACCAATAGAAAATCTCTGGGGGTACGCCGCGGCACGC
CACATGCTATGGTTCACAGC

Downstream 100 bases:

>100_bases
CCGGCATATTCGACCGCCTGCTTTCGCCAGATTCCGGCTCGCCGCGTTCCGGTGCTGCCGGCGATTGAAGTCTGCAACAT
CACCGGCGGGAAAGGTTTGA

Product: TRAP transporter solute receptor TAXI family protein

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MPKTIRYTLLSLRDLAVSAGPFILLAATLLVLAYWWLDPNPPKRVVLATGPAQSAYEEFGKRYARILAKDGIEVVQLPSE
GSATNLQLLREGKADLGFVQGGTSEAGIENDGQLESLGSLFLEPVWLFYREAAARKVASAAPRGNASADGAAAGSTLSAL
TQLQGLRVNVGTPGSGVPNLVNKLLESNRIDSSTLKISRLEQTPATVAFLGGELDAIVFASAPESLMVQMLLQTPGVKLM
DFAQSEAYSRRFEFLSPAVLPRGVVDLATNIPPQDVRLVAPTTTLLTRAGTHPALLQLFALAGNEIHGSAGWFKRAREYP
NVKNNELPVAKEAERSIQAGAPLLQRYLPFWVANLVERMWLVMGIIIAVLLPLSRIVPPLYEFRVRSRIFRWYGQLRDIE
SRIESTGENTRNSALLEELNSLENRAEKISVPLSYTDELYALRSNIHLVRKKLQRL

Sequences:

>Translated_456_residues
MPKTIRYTLLSLRDLAVSAGPFILLAATLLVLAYWWLDPNPPKRVVLATGPAQSAYEEFGKRYARILAKDGIEVVQLPSE
GSATNLQLLREGKADLGFVQGGTSEAGIENDGQLESLGSLFLEPVWLFYREAAARKVASAAPRGNASADGAAAGSTLSAL
TQLQGLRVNVGTPGSGVPNLVNKLLESNRIDSSTLKISRLEQTPATVAFLGGELDAIVFASAPESLMVQMLLQTPGVKLM
DFAQSEAYSRRFEFLSPAVLPRGVVDLATNIPPQDVRLVAPTTTLLTRAGTHPALLQLFALAGNEIHGSAGWFKRAREYP
NVKNNELPVAKEAERSIQAGAPLLQRYLPFWVANLVERMWLVMGIIIAVLLPLSRIVPPLYEFRVRSRIFRWYGQLRDIE
SRIESTGENTRNSALLEELNSLENRAEKISVPLSYTDELYALRSNIHLVRKKLQRL
>Mature_455_residues
PKTIRYTLLSLRDLAVSAGPFILLAATLLVLAYWWLDPNPPKRVVLATGPAQSAYEEFGKRYARILAKDGIEVVQLPSEG
SATNLQLLREGKADLGFVQGGTSEAGIENDGQLESLGSLFLEPVWLFYREAAARKVASAAPRGNASADGAAAGSTLSALT
QLQGLRVNVGTPGSGVPNLVNKLLESNRIDSSTLKISRLEQTPATVAFLGGELDAIVFASAPESLMVQMLLQTPGVKLMD
FAQSEAYSRRFEFLSPAVLPRGVVDLATNIPPQDVRLVAPTTTLLTRAGTHPALLQLFALAGNEIHGSAGWFKRAREYPN
VKNNELPVAKEAERSIQAGAPLLQRYLPFWVANLVERMWLVMGIIIAVLLPLSRIVPPLYEFRVRSRIFRWYGQLRDIES
RIESTGENTRNSALLEELNSLENRAEKISVPLSYTDELYALRSNIHLVRKKLQRL

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50034; Mature: 49903

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTIRYTLLSLRDLAVSAGPFILLAATLLVLAYWWLDPNPPKRVVLATGPAQSAYEEFG
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
KRYARILAKDGIEVVQLPSEGSATNLQLLREGKADLGFVQGGTSEAGIENDGQLESLGSL
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHH
FLEPVWLFYREAAARKVASAAPRGNASADGAAAGSTLSALTQLQGLRVNVGTPGSGVPNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHH
VNKLLESNRIDSSTLKISRLEQTPATVAFLGGELDAIVFASAPESLMVQMLLQTPGVKLM
HHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCHHH
DFAQSEAYSRRFEFLSPAVLPRGVVDLATNIPPQDVRLVAPTTTLLTRAGTHPALLQLFA
HHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHH
LAGNEIHGSAGWFKRAREYPNVKNNELPVAKEAERSIQAGAPLLQRYLPFWVANLVERMW
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LVMGIIIAVLLPLSRIVPPLYEFRVRSRIFRWYGQLRDIESRIESTGENTRNSALLEELN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLENRAEKISVPLSYTDELYALRSNIHLVRKKLQRL
HHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKTIRYTLLSLRDLAVSAGPFILLAATLLVLAYWWLDPNPPKRVVLATGPAQSAYEEFG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
KRYARILAKDGIEVVQLPSEGSATNLQLLREGKADLGFVQGGTSEAGIENDGQLESLGSL
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHH
FLEPVWLFYREAAARKVASAAPRGNASADGAAAGSTLSALTQLQGLRVNVGTPGSGVPNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHH
VNKLLESNRIDSSTLKISRLEQTPATVAFLGGELDAIVFASAPESLMVQMLLQTPGVKLM
HHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCHHH
DFAQSEAYSRRFEFLSPAVLPRGVVDLATNIPPQDVRLVAPTTTLLTRAGTHPALLQLFA
HHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHH
LAGNEIHGSAGWFKRAREYPNVKNNELPVAKEAERSIQAGAPLLQRYLPFWVANLVERMW
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LVMGIIIAVLLPLSRIVPPLYEFRVRSRIFRWYGQLRDIESRIESTGENTRNSALLEELN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLENRAEKISVPLSYTDELYALRSNIHLVRKKLQRL
HHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA