| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789348
Identifier: 91789348
GI number: 91789348
Start: 3695905
End: 3696303
Strand: Reverse
Name: 91789348
Synonym: Bpro_3494
Alternate gene names: NA
Gene position: 3696303-3695905 (Counterclockwise)
Preceding gene: 91789349
Following gene: 91789347
Centisome position: 71.08
GC content: 61.9
Gene sequence:
>399_bases ATGATTTGGAACCGCCGCACCCGCCTGATCACAGTGCTTTTTGCACTGGTCAGCCTGCTGTTCATGCAGTTGGCGGTGGC CAGCTATGCTTGTCCAGGTGCTGCGTCAACGGTCGCGGAAGTCGCCGCGATGGCCGACGCCCGTATGCCCTGCGCCGAAC CCATGTCGCTGAACATGGACGACACGCAGCCCAACCTGTGCCAGGCGCACTGCCAGACTGGCCAGCAAACCGCCGACAAG TACGAATTCCCGTCGCCGGTAGCCATCAGTGCTCTGCCTTCTGATTTCACATCGCCACCCATTGGCCCGGTGTTTTCAGG TGCGCCGCTGCTGGTGCCCGACCTGAAGCGCACCACAGCTCCGCCTGTGGCCATCCGGAACTGTTGCTTCCGCATTTGA
Upstream 100 bases:
>100_bases GGACGGCTGCCCTTGAGAACTTTTGTCGCCGTACCGGGTCACGTCAGTTAAACTTCCCGTTCCCACAACTTACTTATCGC CCTCCTTCGTACTTTAGCCC
Downstream 100 bases:
>100_bases CCTCTCAGACCACTTAGCTCCTGTCTGATGCATTCCTGGTGCATCGACAGGTCGTTATTCGTGCTCTGGAGGTTTTATGT CTATTTCGTTTCCGATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIWNRRTRLITVLFALVSLLFMQLAVASYACPGAASTVAEVAAMADARMPCAEPMSLNMDDTQPNLCQAHCQTGQQTADK YEFPSPVAISALPSDFTSPPIGPVFSGAPLLVPDLKRTTAPPVAIRNCCFRI
Sequences:
>Translated_132_residues MIWNRRTRLITVLFALVSLLFMQLAVASYACPGAASTVAEVAAMADARMPCAEPMSLNMDDTQPNLCQAHCQTGQQTADK YEFPSPVAISALPSDFTSPPIGPVFSGAPLLVPDLKRTTAPPVAIRNCCFRI >Mature_132_residues MIWNRRTRLITVLFALVSLLFMQLAVASYACPGAASTVAEVAAMADARMPCAEPMSLNMDDTQPNLCQAHCQTGQQTADK YEFPSPVAISALPSDFTSPPIGPVFSGAPLLVPDLKRTTAPPVAIRNCCFRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14171; Mature: 14171
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWNRRTRLITVLFALVSLLFMQLAVASYACPGAASTVAEVAAMADARMPCAEPMSLNMD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC DTQPNLCQAHCQTGQQTADKYEFPSPVAISALPSDFTSPPIGPVFSGAPLLVPDLKRTTA CCCCHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCC PPVAIRNCCFRI CCHHHHHHHHCC >Mature Secondary Structure MIWNRRTRLITVLFALVSLLFMQLAVASYACPGAASTVAEVAAMADARMPCAEPMSLNMD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC DTQPNLCQAHCQTGQQTADKYEFPSPVAISALPSDFTSPPIGPVFSGAPLLVPDLKRTTA CCCCHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCC PPVAIRNCCFRI CCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA