Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789347

Identifier: 91789347

GI number: 91789347

Start: 3694542

End: 3695828

Strand: Reverse

Name: 91789347

Synonym: Bpro_3493

Alternate gene names: NA

Gene position: 3695828-3694542 (Counterclockwise)

Preceding gene: 91789348

Following gene: 91789346

Centisome position: 71.07

GC content: 61.85

Gene sequence:

>1287_bases
ATGTCTATTTCGTTTCCGATTTGCCGGGCTGCCGTTGCCGCTCTGTTCGTTGCCATGGGGTCGCCATCATGGGCAACTGA
CCCGTTGACCCTGGCGGAGGCGCAGCGCATTGCGGTGGGCCGTTCCCAGCAATTGGTCGCTCAAAACGCGCTTACTGCCG
CCGCCCGCGAGCAGGCCGTGGCTGCCGGCCAGTTGCCCGACCCGGTGCTCAAGCTGGGCATTGACAACCTGCCGGCCAAT
GGCCCAGACCGTCTCAGCCTGACGCGTGACTTCATGACCATGCGCCGCATTGGCGTCATGCAGGAGATTCCGCGCGCCGA
AAAACGCCAGCTCAGGGCGGAAAAGTTTGAACGCGACGCTGAGCGAGTGAGGGCGCAGCGGCAACTGACGCTGGCCAACG
TGCAGCGCGACACGGCGCTGGCCTGGCTGGATCGTTATTACGCTCAAGCCCAGCGTGAATTGTTGCAGCAACAAATTGAG
GAAACCCGACTGCAGGTTCAAGCCGCAGACAGCGCCTTTCGCACCGGCCGGGGCAGCCAGGCTGACGTGTTCGCAGCCCG
CGCCGCAGTGATCATGCTGCAAGACCGCCTCAGCCAAATTGATCGCCAGTCGCGCAGCGCTGCTCTGATGCTGGCCCGGT
GGGTGGGTGCTTCTGCCGTTGAACGACCAAGCTCTGGCTCGCCACCCTGGCAAAGCACGCCGCTACAGGGTGATATTTCG
AGCGAACCCCTCAAGCGGCATCCTGATCTGCTGATAATAAGTGCCGAGATTGATGCCGCTGAAACTGAAGTCCGGCTTGC
TCAGGCTAATAAGAAGGCCGACATCAGCGTGGAGGCGAGCTACGCTCAGCGCGGCCCAGCCTTCTCCAACATGCTCTCCA
TCGGGGTATCCATCCCCTTGCAGTGGGACCCCAAAAATCGCCAGAACCGTGAGTTAGGCGCCAAGCTGGCCATGGTCGAT
GAGGCTAAGGCCAGATACGAGGACTTGCTGCGCAAGAACGAAGCTGAAGTCCGCAGCCTGCTCAACGAATGGCAGACGGG
TAAGGACCGGCTGGTCCGATACCGTGATGAGCTGATTCCCACCGCCCGACAGCGCTCCGAGGCGACGCTCACGGCCTATC
GCATTGGCAAAAGCGACCTGGCTGCTGGGCTGTCAGCACGCCGCGACGAAATTGATGTCCGCATGCAGGCCCTGACCCTG
GAGATGGAAACGGCGCGTTCCTGGGCGCAGCTCAACTTTCTGATCCCCGACCTCCACATTTCCGCACCCGCCAAGGACCA
ACCATGA

Upstream 100 bases:

>100_bases
CGGAACTGTTGCTTCCGCATTTGACCTCTCAGACCACTTAGCTCCTGTCTGATGCATTCCTGGTGCATCGACAGGTCGTT
ATTCGTGCTCTGGAGGTTTT

Downstream 100 bases:

>100_bases
ACAAGAAATATCTCATTGCCGCGCTGCTTGCTGCGGGCGTGCTTGGCGCCGCCGGTTACGGTCTGTACACCCTGGGGGTG
AAAAAGGGCGGCACCATGCC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Outer Membrane Protein; Outer Membrane Cation Efflux Protein; Cation Efflux Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; Cobalt-Zinc-Cadmium Resistance Outer Membrane Porin; Copper/Silver Resistance Outer Membrane Protein; Heavy Metal RND Efflux CzcC Family; Cation Resistance Protein CzcC; Efflux System Outer Membrane Protein; Outer Membrane Silver Efflux Protein; Outer Membrane Protein lC; Outer Membrane Heavy Metal Efflux Protein; Outer Membrane Cation Efflux System Protein CzcC; Metal Ion Efflux Outer Membrane Protein Family Protein; RND Family Metal Ion Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAVAAGQLPDPVLKLGIDNLPAN
GPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDAERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIE
ETRLQVQAADSAFRTGRGSQADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS
SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPLQWDPKNRQNRELGAKLAMVD
EAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIPTARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTL
EMETARSWAQLNFLIPDLHISAPAKDQP

Sequences:

>Translated_428_residues
MSISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAVAAGQLPDPVLKLGIDNLPAN
GPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDAERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIE
ETRLQVQAADSAFRTGRGSQADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS
SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPLQWDPKNRQNRELGAKLAMVD
EAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIPTARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTL
EMETARSWAQLNFLIPDLHISAPAKDQP
>Mature_427_residues
SISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAVAAGQLPDPVLKLGIDNLPANG
PDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDAERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIEE
TRLQVQAADSAFRTGRGSQADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDISS
EPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPLQWDPKNRQNRELGAKLAMVDE
AKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIPTARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTLE
METARSWAQLNFLIPDLHISAPAKDQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47580; Mature: 47448

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCC
>Mature Secondary Structure 
SISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAV
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAGQLPDPVLKLGIDNLPANGPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDA
HCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIEETRLQVQAADSAFRTGRGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCC
SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPL
CCCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHHCEEEEE
QWDPKNRQNRELGAKLAMVDEAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIP
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
TARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTLEMETARSWAQLNFLIPDLHI
HHHHCCCCEEHHEECCHHHHHHHHHHCHHHHHHHHHHHEEEHHHHHHHHHHEEEECCCEE
SAPAKDQP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA