| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789306
Identifier: 91789306
GI number: 91789306
Start: 3656417
End: 3657070
Strand: Direct
Name: 91789306
Synonym: Bpro_3451
Alternate gene names: NA
Gene position: 3656417-3657070 (Clockwise)
Preceding gene: 91789304
Following gene: 91789307
Centisome position: 70.31
GC content: 63.46
Gene sequence:
>654_bases ATGGTGCGCCCCTCCCAATACATCGACCAGATCCTGCTCGACGCCGGGCTGGAGTTGTTGCCCGTCACCGGTTGCGCCGG CCTGTCGGTGCGGCGCCTGACGCAGCATGCAGGCGTCAACCTCGGGATGTTCCACTACCATTTCAAGACCAAAGAGAACT TCATCAAGGCGGTGCTGGAGCGCACCTACGAAGAAATGTTCTCGGCGCTGACGCTGCGCGTCAATCCCGCGCACCCGCCC ATGCAAAACCTGCGCGATGCGCTGGGCGTGCTGGGCAGTTTTGGCATCAAAAATGGCCGCCTGCTGGTGCGCATCATGGG CGATGCCATGAATGGCGAGCCGCTGGCCGCTGACTTCCTCAAGGCCAACCTGCCGCGCCATGTTGAAGTGATTGCCTCGC TGGTGCAGGAAGCCCAGTGGGAGGGCAGCATGGTCAAGGCCCCCGTGCCCCAGGTCATTGCTTTCATGGCCGGCGCCGTT GCGGCCCCCGTGCTGGCGGCCACGGCCTTGCAGCAAAACCCGACCGCCCAGGCCGTGGCCAAGGTGGTTCTCTCTGAAGA GGCCCTGGCCCAACGCATCGAGTTCGCCCTGCGCGGGCTGACGCCTTCTTCCGGAGACAAAAGGGACATAAGAGACACAA GGGACACACGATGA
Upstream 100 bases:
>100_bases ATCGGAGGCGCTGTGAACGGAGAGGCTGTGTAGGGACATGGGGCCTGCGATTGTCTCCAATCCGGATTGACCAATTACTA CACATTCGTATAATAATTGC
Downstream 100 bases:
>100_bases AGACACTGCAGTACTGCGCCTGCGCCCTGCTGGCCGCCAGCCTGCTGGTGGCATGCGACAGCAGGCAGCCTGACACCTTC CCCGGCTATGCCGAGGCGGA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MVRPSQYIDQILLDAGLELLPVTGCAGLSVRRLTQHAGVNLGMFHYHFKTKENFIKAVLERTYEEMFSALTLRVNPAHPP MQNLRDALGVLGSFGIKNGRLLVRIMGDAMNGEPLAADFLKANLPRHVEVIASLVQEAQWEGSMVKAPVPQVIAFMAGAV AAPVLAATALQQNPTAQAVAKVVLSEEALAQRIEFALRGLTPSSGDKRDIRDTRDTR
Sequences:
>Translated_217_residues MVRPSQYIDQILLDAGLELLPVTGCAGLSVRRLTQHAGVNLGMFHYHFKTKENFIKAVLERTYEEMFSALTLRVNPAHPP MQNLRDALGVLGSFGIKNGRLLVRIMGDAMNGEPLAADFLKANLPRHVEVIASLVQEAQWEGSMVKAPVPQVIAFMAGAV AAPVLAATALQQNPTAQAVAKVVLSEEALAQRIEFALRGLTPSSGDKRDIRDTRDTR >Mature_217_residues MVRPSQYIDQILLDAGLELLPVTGCAGLSVRRLTQHAGVNLGMFHYHFKTKENFIKAVLERTYEEMFSALTLRVNPAHPP MQNLRDALGVLGSFGIKNGRLLVRIMGDAMNGEPLAADFLKANLPRHVEVIASLVQEAQWEGSMVKAPVPQVIAFMAGAV AAPVLAATALQQNPTAQAVAKVVLSEEALAQRIEFALRGLTPSSGDKRDIRDTRDTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23636; Mature: 23636
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPSQYIDQILLDAGLELLPVTGCAGLSVRRLTQHAGVNLGMFHYHFKTKENFIKAVLE CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHH RTYEEMFSALTLRVNPAHPPMQNLRDALGVLGSFGIKNGRLLVRIMGDAMNGEPLAADFL HHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHH KANLPRHVEVIASLVQEAQWEGSMVKAPVPQVIAFMAGAVAAPVLAATALQQNPTAQAVA HCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KVVLSEEALAQRIEFALRGLTPSSGDKRDIRDTRDTR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVRPSQYIDQILLDAGLELLPVTGCAGLSVRRLTQHAGVNLGMFHYHFKTKENFIKAVLE CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHH RTYEEMFSALTLRVNPAHPPMQNLRDALGVLGSFGIKNGRLLVRIMGDAMNGEPLAADFL HHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHH KANLPRHVEVIASLVQEAQWEGSMVKAPVPQVIAFMAGAVAAPVLAATALQQNPTAQAVA HCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KVVLSEEALAQRIEFALRGLTPSSGDKRDIRDTRDTR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA