Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhiI [C]

Identifier: 91789307

GI number: 91789307

Start: 3657067

End: 3658047

Strand: Direct

Name: yhiI [C]

Synonym: Bpro_3452

Alternate gene names: 91789307

Gene position: 3657067-3658047 (Clockwise)

Preceding gene: 91789306

Following gene: 91789308

Centisome position: 70.32

GC content: 69.93

Gene sequence:

>981_bases
ATGAAGACACTGCAGTACTGCGCCTGCGCCCTGCTGGCCGCCAGCCTGCTGGTGGCATGCGACAGCAGGCAGCCTGACAC
CTTCCCCGGCTATGCCGAGGCGGAATACGTCCGGCTGGCGGCGCCCATCAGCGGCACCCTGGCCCGGCTACACCTGAAGC
GCGGCGATGCGGCGCCCGCATCGGCGGCCGCCTTCGTGCTGGAGCAGGACAGTGAACGGGCCGCGCGTGAGGAGGCGGCT
CACCGCGTGGCGCGCGCGCAGGACAACCTGGCCAACCTGCGCCAGGGCAAGCGCCCCGATGAACTGGCAGCCATCCGCGC
GCAACTGGCGCAAGGCGAGGCCGCGCTGGCGCTGTCGTCTGCCGAACTGGCACGCAGCAACCGCCTGGTGGCGCAGCAGT
TCCTCTCGCCGGCCAGCCTGGACCAGGCCCGCACCGCCGTGGCACGCGACCAGGGCCGCGTCAACGAACTGAACGCTCAA
CTGCGCCAGGCCATGCAGGGTGCACGCAGCGCCGAGATCAGCGCTGCCGAACAGGAAGTCAAGGCCGCACAGGCGCAACT
GCAGCAGGCGGGCTGGCGAGTCGACCAGAAAACCCAGCGCACCCCGGTGGCCGGCGAGGTGGTGGACGTGCTGTACCGCG
AAGGCGAATGGGTGCCCGCTGGCGCGGCCGTGCTGACCCTGCTGCCGCCGGCCAATATCAAGGCGCGCTTTTTCCTGCCG
CAAACCCAGCTCGGCACCATCGCCATCGGCCAGGCGGTGCAGTTGCAGTGCGACGGCTGCGGCGCCGCGATGGCGGCAAA
AATCACTTTCATCGCGCGGGAAGCCGAGTACACCTCACCCCTCATCTACAGCAAGGAAAACCGCGCCAAGCTCGTCTTCA
TGGTCGAGGCGCAACCCGGCCTGACGGACGCGCCACGCCTGCACCCGGGCCAACCGCTGGAGGTACGCCTGGGGAGTAAA
GCCGCGGGGCGGGCGCCATGA

Upstream 100 bases:

>100_bases
TCTCTGAAGAGGCCCTGGCCCAACGCATCGAGTTCGCCCTGCGCGGGCTGACGCCTTCTTCCGGAGACAAAAGGGACATA
AGAGACACAAGGGACACACG

Downstream 100 bases:

>100_bases
GCCGCCGGGCCGCTCCCAAGGCGAATGGCACCGCAGCGCGTAGCGCGGAGGTTACCCCATGAACCGCCGGGCCGCTCCCA
GGGCGAATGGCAGCGCGGAG

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKTLQYCACALLAASLLVACDSRQPDTFPGYAEAEYVRLAAPISGTLARLHLKRGDAAPASAAAFVLEQDSERAAREEAA
HRVARAQDNLANLRQGKRPDELAAIRAQLAQGEAALALSSAELARSNRLVAQQFLSPASLDQARTAVARDQGRVNELNAQ
LRQAMQGARSAEISAAEQEVKAAQAQLQQAGWRVDQKTQRTPVAGEVVDVLYREGEWVPAGAAVLTLLPPANIKARFFLP
QTQLGTIAIGQAVQLQCDGCGAAMAAKITFIAREAEYTSPLIYSKENRAKLVFMVEAQPGLTDAPRLHPGQPLEVRLGSK
AAGRAP

Sequences:

>Translated_326_residues
MKTLQYCACALLAASLLVACDSRQPDTFPGYAEAEYVRLAAPISGTLARLHLKRGDAAPASAAAFVLEQDSERAAREEAA
HRVARAQDNLANLRQGKRPDELAAIRAQLAQGEAALALSSAELARSNRLVAQQFLSPASLDQARTAVARDQGRVNELNAQ
LRQAMQGARSAEISAAEQEVKAAQAQLQQAGWRVDQKTQRTPVAGEVVDVLYREGEWVPAGAAVLTLLPPANIKARFFLP
QTQLGTIAIGQAVQLQCDGCGAAMAAKITFIAREAEYTSPLIYSKENRAKLVFMVEAQPGLTDAPRLHPGQPLEVRLGSK
AAGRAP
>Mature_326_residues
MKTLQYCACALLAASLLVACDSRQPDTFPGYAEAEYVRLAAPISGTLARLHLKRGDAAPASAAAFVLEQDSERAAREEAA
HRVARAQDNLANLRQGKRPDELAAIRAQLAQGEAALALSSAELARSNRLVAQQFLSPASLDQARTAVARDQGRVNELNAQ
LRQAMQGARSAEISAAEQEVKAAQAQLQQAGWRVDQKTQRTPVAGEVVDVLYREGEWVPAGAAVLTLLPPANIKARFFLP
QTQLGTIAIGQAVQLQCDGCGAAMAAKITFIAREAEYTSPLIYSKENRAKLVFMVEAQPGLTDAPRLHPGQPLEVRLGSK
AAGRAP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1789900, Length=313, Percent_Identity=25.5591054313099, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 34822; Mature: 34822

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLQYCACALLAASLLVACDSRQPDTFPGYAEAEYVRLAAPISGTLARLHLKRGDAAPA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHEEECCCCCCCC
SAAAFVLEQDSERAAREEAAHRVARAQDNLANLRQGKRPDELAAIRAQLAQGEAALALSS
HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEHH
AELARSNRLVAQQFLSPASLDQARTAVARDQGRVNELNAQLRQAMQGARSAEISAAEQEV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
KAAQAQLQQAGWRVDQKTQRTPVAGEVVDVLYREGEWVPAGAAVLTLLPPANIKARFFLP
HHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECC
QTQLGTIAIGQAVQLQCDGCGAAMAAKITFIAREAEYTSPLIYSKENRAKLVFMVEAQPG
CCCCCEEEECCEEEEEECCCCHHHHHHHHEEEECCCCCCCEEEECCCCEEEEEEEECCCC
LTDAPRLHPGQPLEVRLGSKAAGRAP
CCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKTLQYCACALLAASLLVACDSRQPDTFPGYAEAEYVRLAAPISGTLARLHLKRGDAAPA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHEEECCCCCCCC
SAAAFVLEQDSERAAREEAAHRVARAQDNLANLRQGKRPDELAAIRAQLAQGEAALALSS
HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEHH
AELARSNRLVAQQFLSPASLDQARTAVARDQGRVNELNAQLRQAMQGARSAEISAAEQEV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
KAAQAQLQQAGWRVDQKTQRTPVAGEVVDVLYREGEWVPAGAAVLTLLPPANIKARFFLP
HHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECC
QTQLGTIAIGQAVQLQCDGCGAAMAAKITFIAREAEYTSPLIYSKENRAKLVFMVEAQPG
CCCCCEEEECCEEEEEECCCCHHHHHHHHEEEECCCCCCCEEEECCCCEEEEEEEECCCC
LTDAPRLHPGQPLEVRLGSKAAGRAP
CCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA