The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is livH [H]

Identifier: 91789239

GI number: 91789239

Start: 3576254

End: 3577126

Strand: Reverse

Name: livH [H]

Synonym: Bpro_3383

Alternate gene names: 91789239

Gene position: 3577126-3576254 (Counterclockwise)

Preceding gene: 91789240

Following gene: 91789238

Centisome position: 68.79

GC content: 64.15

Gene sequence:

>873_bases
ATGCTCACCATCCTCTTCGACGGCATCGCCTACGGCATGCTGCTGTTTGTGCTCGCAGTCGGTCTGGCCGTCACCATGGG
GCTGATGAATTTCATCAACCTGGCGCACGGCGCGTTTGCCATGGTGGGCGGCTACATCACCGTGCTGCTGATGCAGCGGC
TGGGCATGCCCTTTTTGCTGTGCCTGCCGTTGGCTTTTGCGGGCGCGGCGCTGCTGGGCGGTGTACTGGAACGCACGCTG
TACCGGCCGATGTACGCCAGGCCGCACCTGGACCAAGTGCTGTTTTCCATTGGCCTGACCTTCATGGCGGTGGCCAGCAT
GGACTACTTCATGGGCTCGACCCAGCAGATCATCCAGTTGCCTGACTGGCTGCGTGGCCGCACCGAAATCGGCAGCGGCT
CGTGGATTCTGGGCATGGGCCACTACCGCCTGTTCATCGTGGCCGTGTGTGCGGCGCTCACGCTGGCGCTGCAGTATGTG
CTGGCGCGCACGCGCTTTGGCAGCCGCCTGCGCGCGTCGGTGGATGACCAGCGCGTGGCCGCCGGCCTGGGCATCAATGT
CAATGTGGTGTTCCTGTCCACCTTCGCGGTCGGCTCGGGGCTGGCCGGCCTGGGCGGCGCGCTGGGCGCCGAAGTGCTGG
GGCTGGACCCGACCTTTCCGCTGAAATTCATGATTTACTTTTTGATCGTCGTTGCCGTCGGCGGCACCTCGTCCATCACC
GGGCCGCTGCTGGCCGCGCTGCTGCTGGGCATTGCCGATGTGGCCGGCAAGTACTACATCCCCAAACTCGGCGCCTTCAT
CGTCTACAGCCTGATGATCGCCATCCTGATCTGGCGTCCGCAAGGCCTGTTTGTGCGCAAAGGCGGCAAGTGA

Upstream 100 bases:

>100_bases
TGCCGGGTCAAGCCCGGCATGACAGCTATTTTGGTTGCTTGTCATTGCGGGTCGAGCCCGCAATCCATGATCCCGACTTC
TTGACTAACTACCATCACTG

Downstream 100 bases:

>100_bases
TGAACAACAAACCACTCCTGCCGGTCCGGCAGTCCCTGCTGAATGCCTCGCGCTGGAAACCCTGGGAGCCGGTGCTGTGG
CTGCTGGCGTTTGCCTCGCC

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein H [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLTILFDGIAYGMLLFVLAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQRLGMPFLLCLPLAFAGAALLGGVLERTL
YRPMYARPHLDQVLFSIGLTFMAVASMDYFMGSTQQIIQLPDWLRGRTEIGSGSWILGMGHYRLFIVAVCAALTLALQYV
LARTRFGSRLRASVDDQRVAAGLGINVNVVFLSTFAVGSGLAGLGGALGAEVLGLDPTFPLKFMIYFLIVVAVGGTSSIT
GPLLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQGLFVRKGGK

Sequences:

>Translated_290_residues
MLTILFDGIAYGMLLFVLAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQRLGMPFLLCLPLAFAGAALLGGVLERTL
YRPMYARPHLDQVLFSIGLTFMAVASMDYFMGSTQQIIQLPDWLRGRTEIGSGSWILGMGHYRLFIVAVCAALTLALQYV
LARTRFGSRLRASVDDQRVAAGLGINVNVVFLSTFAVGSGLAGLGGALGAEVLGLDPTFPLKFMIYFLIVVAVGGTSSIT
GPLLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQGLFVRKGGK
>Mature_290_residues
MLTILFDGIAYGMLLFVLAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQRLGMPFLLCLPLAFAGAALLGGVLERTL
YRPMYARPHLDQVLFSIGLTFMAVASMDYFMGSTQQIIQLPDWLRGRTEIGSGSWILGMGHYRLFIVAVCAALTLALQYV
LARTRFGSRLRASVDDQRVAAGLGINVNVVFLSTFAVGSGLAGLGGALGAEVLGLDPTFPLKFMIYFLIVVAVGGTSSIT
GPLLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQGLFVRKGGK

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=302, Percent_Identity=27.1523178807947, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30996; Mature: 30996

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTILFDGIAYGMLLFVLAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQRLGMPFLL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CLPLAFAGAALLGGVLERTLYRPMYARPHLDQVLFSIGLTFMAVASMDYFMGSTQQIIQL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
PDWLRGRTEIGSGSWILGMGHYRLFIVAVCAALTLALQYVLARTRFGSRLRASVDDQRVA
CHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHH
AGLGINVNVVFLSTFAVGSGLAGLGGALGAEVLGLDPTFPLKFMIYFLIVVAVGGTSSIT
HCCCCEEEEEEEEHHHHHCCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCH
GPLLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQGLFVRKGGK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
>Mature Secondary Structure
MLTILFDGIAYGMLLFVLAVGLAVTMGLMNFINLAHGAFAMVGGYITVLLMQRLGMPFLL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CLPLAFAGAALLGGVLERTLYRPMYARPHLDQVLFSIGLTFMAVASMDYFMGSTQQIIQL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
PDWLRGRTEIGSGSWILGMGHYRLFIVAVCAALTLALQYVLARTRFGSRLRASVDDQRVA
CHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHH
AGLGINVNVVFLSTFAVGSGLAGLGGALGAEVLGLDPTFPLKFMIYFLIVVAVGGTSSIT
HCCCCEEEEEEEEHHHHHCCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCH
GPLLAALLLGIADVAGKYYIPKLGAFIVYSLMIAILIWRPQGLFVRKGGK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]