| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braD [H]
Identifier: 91789191
GI number: 91789191
Start: 3529165
End: 3530094
Strand: Reverse
Name: braD [H]
Synonym: Bpro_3335
Alternate gene names: 91789191
Gene position: 3530094-3529165 (Counterclockwise)
Preceding gene: 91789192
Following gene: 91789190
Centisome position: 67.88
GC content: 56.67
Gene sequence:
>930_bases ATGAGTGAAGTTAGTCAATACATCTTCAATGGCCTGATGCTGGGCGTGATTTACGCCATGGTCGCCGTTGGCTTTACCCT GTTTTTCGGGGTTCTGGACGTTATCAAGTTCTCGCACGGTGATACCTTGATGGTGGGGGCCTTCGCCGGGCTCACGGTGT CCATCGTGATGATGAACATCGGGCTGGCTTCTCCGGCGCTACAGTTGCTCGCGGTGGTTGTTTTTGCTGTCGCCGTCACT GGTTTGCTGGGGGCGGGAATTGCCAAGTTCCTGATCCTGCCGCTGCGTCATGCGCCACCGCTCAACACGCTGCTGGCGAC GCTTATGCTCGGCACCGTGATGCGCGAGGCGGTTCGTCTGTTCTATCCTGACGGCTCCAACCCAAAACCGTTTCCCGCAT TGCTGCCTACCTCCATGGTGGAACTGGGTGGGCTTTCGTTGCGAATTGACAACCTCATTTTGCTGGCCAGCGGCCTGCTC GCCATTGCCGGGGTACACCTTCTCATCACGCGCACCAAACTCGGCATGGCGATTCGTGCTGTGGCGCAAGACGGAGAGAC AGCGCGGTTGATGGGCATCAACTTCGAGGCGGTTGTGCTGATTACATTTGCACTGGGGTCTGGCCTGGCTGCGCTCGCCG GTGTGATGAATGGCCTGTACTACAACGAAGTCAACTTCAATGTCGGTTTGCTGCTGGGGGTGATCGGGTTTGCCGCCGCC ATTCTGGGTGGGCTGGGCAATATCTATGGCGCCATCATTGGGGGATTTCTTTTCGCTGCTTTGCAGGTGATTGGCAGCGC CATGTTGCCCACACTGATTCCCGACATTCCAAGCTCTTACAAGGATGTTTTTGCCTTCGCCGCCGTCATCATTTTTATGG CCTGGAAACCGACTGGTCTGATCGCCGAAAAGTCGAGCGAGCGAGTTTAG
Upstream 100 bases:
>100_bases AAGGGCAAGCACAAGCTGGCCGGTTTGTAATCCCCAAGATGCCCTCCTGCACGCCATCGGCGACGCGGGAGGGTAACCCT CAATCGTTTCAGGAAACCTG
Downstream 100 bases:
>100_bases TACCATGAAACAACAAGAATCCATGACTCCCGCGAGATCTGCCTTGATGCTCAGCGTCGCGGCGCTTGTCCTGACCGTAT ATGTGTGGTTTTTCCTGCAT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSEVSQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFAGLTVSIVMMNIGLASPALQLLAVVVFAVAVT GLLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRLFYPDGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLL AIAGVHLLITRTKLGMAIRAVAQDGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNVGLLLGVIGFAAA ILGGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDIPSSYKDVFAFAAVIIFMAWKPTGLIAEKSSERV
Sequences:
>Translated_309_residues MSEVSQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFAGLTVSIVMMNIGLASPALQLLAVVVFAVAVT GLLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRLFYPDGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLL AIAGVHLLITRTKLGMAIRAVAQDGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNVGLLLGVIGFAAA ILGGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDIPSSYKDVFAFAAVIIFMAWKPTGLIAEKSSERV >Mature_308_residues SEVSQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFAGLTVSIVMMNIGLASPALQLLAVVVFAVAVTG LLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRLFYPDGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLLA IAGVHLLITRTKLGMAIRAVAQDGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNVGLLLGVIGFAAAI LGGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDIPSSYKDVFAFAAVIIFMAWKPTGLIAEKSSERV
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=308, Percent_Identity=31.1688311688312, Blast_Score=139, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32259; Mature: 32128
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVSQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFAGLTVSIVMMNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHC GLASPALQLLAVVVFAVAVTGLLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FYPDGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLLAIAGVHLLITRTKLGMAIRA CCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQDGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNVGLLLGVIGFAAA HHCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHH ILGGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDIPSSYKDVFAFAAVIIFMAWKPTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC IAEKSSERV EECCCCCCC >Mature Secondary Structure SEVSQYIFNGLMLGVIYAMVAVGFTLFFGVLDVIKFSHGDTLMVGAFAGLTVSIVMMNI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHC GLASPALQLLAVVVFAVAVTGLLGAGIAKFLILPLRHAPPLNTLLATLMLGTVMREAVRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FYPDGSNPKPFPALLPTSMVELGGLSLRIDNLILLASGLLAIAGVHLLITRTKLGMAIRA CCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAQDGETARLMGINFEAVVLITFALGSGLAALAGVMNGLYYNEVNFNVGLLLGVIGFAAA HHCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHH ILGGLGNIYGAIIGGFLFAALQVIGSAMLPTLIPDIPSSYKDVFAFAAVIIFMAWKPTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC IAEKSSERV EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]