| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braE [H]
Identifier: 91789190
GI number: 91789190
Start: 3527994
End: 3529160
Strand: Reverse
Name: braE [H]
Synonym: Bpro_3334
Alternate gene names: 91789190
Gene position: 3529160-3527994 (Counterclockwise)
Preceding gene: 91789191
Following gene: 91789189
Centisome position: 67.87
GC content: 57.24
Gene sequence:
>1167_bases ATGAAACAACAAGAATCCATGACTCCCGCGAGATCTGCCTTGATGCTCAGCGTCGCGGCGCTTGTCCTGACCGTATATGT GTGGTTTTTCCTGCATGCAGAGAGTCAAATCGGCATTGCCATTTTGCTGGTTGCCGCAATCGTGGCTGTAATTTTGAGTC GCCGATTCGGTGTGACGCTGCTGGTCGAGCAGTCGGCCGCGCGGCGCCCGGGCCTGTCCCGATGGTTGGCCGTTGGCTGC GGTGTGGCCTTGATAGCGGCTTTCCACAGCTCACACTTCGTGTTGTTGATGCTGTGCGGCGTGTTGCTGTACTCCACGGC CTGTCTCGGTTTGACGGTGCAATTCGGATACTCGGGCGTGGCCAACTTTGCCGGGGCCGCATTTTTTGGCATTGGCAGTT ACGCCACGGCCGTGCTCGCATCCCACACGGCCATTCCCCACGCCCTCGTCATCCTGATCTCTGGCCTGAGTGCCGCCGTC ATCGGTTCGCTGCTGATTCTGCCGGTGTTGCGAACGCGCGGCCACTATGCGGCGCTGGTCACCATCGCGTTCGGTATCCT GTTCAAGACCTTCATCGAGGTCAACGATGTGCTGGGTGGGCCGCAAGGCTTGCAGGTGCCTGGAATGAAGTTGTTCGGCT TGTCGTTGAACGAGGGCTTCAGCCTGTTCGGCCTGGAGATCTCTTTCTATGTCACCTACGCATTGCTCAGTCTTGCCATG TTCGCGGGGGTCTATGCCCTGGTCAACGCACTGGAGCGGTCCTGGGTCGGCCTGAGCATGGACGTGGTGCGAACCGATGA AACAGCGGCATCCACCTTCGGCCTGCACATCGTTCGCTGGAAGGTCATCGCCTTCACCATGGGCAACTTTTTCGCGGGTA TCGCCGGCGCTCTTTACGGGATGATCATTGCATTTGTCGCGCCCAACAACTTCACTTTTGGCGACTCGCTGCTGATGCTC TCGATTGTCATTTTGGGTGGCCTGGGCAATATTGCCGGCTTGATTCCGGCCGCGATTATTGTGCTGATTCTTCCTGAAAA ACTTCAAGTCATTCAGGAATACCGTTTCCTCTTGTATGCGGCGCTGGTGATTGTGATTTTGCTGTTTAGGTCGCAGGGGC TGCTGCCGCGCAAGACACGGATTTTCTTCGCCAGGAAGGGTTCATGA
Upstream 100 bases:
>100_bases TCTTACAAGGATGTTTTTGCCTTCGCCGCCGTCATCATTTTTATGGCCTGGAAACCGACTGGTCTGATCGCCGAAAAGTC GAGCGAGCGAGTTTAGTACC
Downstream 100 bases:
>100_bases TGGCCGGCCAGTCCCTGATCTCGGTTGACAGGCTGACCATGCGTTTTGGTGGCCTGACGGCGCTCGATGAACTGTCCATG ACTGTGCATGAGGGAGAAAT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKQQESMTPARSALMLSVAALVLTVYVWFFLHAESQIGIAILLVAAIVAVILSRRFGVTLLVEQSAARRPGLSRWLAVGC GVALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGVANFAGAAFFGIGSYATAVLASHTAIPHALVILISGLSAAV IGSLLILPVLRTRGHYAALVTIAFGILFKTFIEVNDVLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAM FAGVYALVNALERSWVGLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYGMIIAFVAPNNFTFGDSLLML SIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEYRFLLYAALVIVILLFRSQGLLPRKTRIFFARKGS
Sequences:
>Translated_388_residues MKQQESMTPARSALMLSVAALVLTVYVWFFLHAESQIGIAILLVAAIVAVILSRRFGVTLLVEQSAARRPGLSRWLAVGC GVALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGVANFAGAAFFGIGSYATAVLASHTAIPHALVILISGLSAAV IGSLLILPVLRTRGHYAALVTIAFGILFKTFIEVNDVLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAM FAGVYALVNALERSWVGLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYGMIIAFVAPNNFTFGDSLLML SIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEYRFLLYAALVIVILLFRSQGLLPRKTRIFFARKGS >Mature_388_residues MKQQESMTPARSALMLSVAALVLTVYVWFFLHAESQIGIAILLVAAIVAVILSRRFGVTLLVEQSAARRPGLSRWLAVGC GVALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGVANFAGAAFFGIGSYATAVLASHTAIPHALVILISGLSAAV IGSLLILPVLRTRGHYAALVTIAFGILFKTFIEVNDVLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAM FAGVYALVNALERSWVGLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYGMIIAFVAPNNFTFGDSLLML SIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEYRFLLYAALVIVILLFRSQGLLPRKTRIFFARKGS
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=290, Percent_Identity=35.5172413793103, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 41429; Mature: 41429
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQESMTPARSALMLSVAALVLTVYVWFFLHAESQIGIAILLVAAIVAVILSRRFGVTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE LVEQSAARRPGLSRWLAVGCGVALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGV EEECHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCHH ANFAGAAFFGIGSYATAVLASHTAIPHALVILISGLSAAVIGSLLILPVLRTRGHYAALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TIAFGILFKTFIEVNDVLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHH FAGVYALVNALERSWVGLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYG HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIIAFVAPNNFTFGDSLLMLSIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEYRFLLYA HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALVIVILLFRSQGLLPRKTRIFFARKGS HHHHHHHHHHCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKQQESMTPARSALMLSVAALVLTVYVWFFLHAESQIGIAILLVAAIVAVILSRRFGVTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE LVEQSAARRPGLSRWLAVGCGVALIAAFHSSHFVLLMLCGVLLYSTACLGLTVQFGYSGV EEECHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCHH ANFAGAAFFGIGSYATAVLASHTAIPHALVILISGLSAAVIGSLLILPVLRTRGHYAALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TIAFGILFKTFIEVNDVLGGPQGLQVPGMKLFGLSLNEGFSLFGLEISFYVTYALLSLAM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHH FAGVYALVNALERSWVGLSMDVVRTDETAASTFGLHIVRWKVIAFTMGNFFAGIAGALYG HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIIAFVAPNNFTFGDSLLMLSIVILGGLGNIAGLIPAAIIVLILPEKLQVIQEYRFLLYA HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ALVIVILLFRSQGLLPRKTRIFFARKGS HHHHHHHHHHCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]