| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livJ [H]
Identifier: 91789192
GI number: 91789192
Start: 3530165
End: 3531343
Strand: Reverse
Name: livJ [H]
Synonym: Bpro_3336
Alternate gene names: 91789192
Gene position: 3531343-3530165 (Counterclockwise)
Preceding gene: 91789197
Following gene: 91789191
Centisome position: 67.91
GC content: 55.56
Gene sequence:
>1179_bases ATGCGTAGGCGGAACACGATATTGGCAGGAACGGCGTTGTTGACGACATGTCTGAGTCTGGCTCTCCTGGCCAGTCCAGT CATGGCTAAAGAAGTGGTGAAAATCGCCTTTGTCGGTCCGTTGACCGGTGGGGTCTCCAATATGGGTCTGGGGGGGCGCA ATTCAGCAGACTTGGCAGTGCGCCTGCGCAATCAGGACCCCAAATCCAAATACACCTATGAATTGGTGGCGCAGGACGAC GAGTGCAAGCCCAATGTGGGTGTGCAGGTGGCGACCAAGGTGGCCGCAGACAAAAATATCGTGGCGGGCGTCACACACTA TTGCTCGGCAGTCGCCATGGCCACGGCGGGCGTGTACAACCGTTTTGGCATGCCGGCTGTGGTGTGGGGTGCGGTTCTGC CCGAGGTCACCTACGGCAACAACTTCCAGGAAGTTCATCGTGTCAACGGCACGATGATCAATCAGAACGAGGTCGCCTAC AAGTTCATGGCCGGACTGGGCTACAAAAAATGGGCCATTATTCATGACACAACGGACTACGGCAAAGGACACAACAAATA CTTCAGCGAATTCCTGAAAAAAGGTGGCGGTACGGTCCTGGGCACCTTCGGTGTGACGGCGGACCAACAGGATTTCACCA CCGAACTGACCAAGATTCGTGAGTTGAATCCCGACGTCATTTACTTCGGCGGACTGACGCCGCTCGGGGTACGGATTCGG ACGCAGATGGAGAAGCTGGGCATCAAGGCTCAATTCCAGGGTACCTCCGGGATAAAGTCCGATGCCTATATTCAGGGTGC TGGCAAGGAGCTGGCTGAAGGCACGCTTTCGTTTATCGAAGGGGCGCCATGGGAGAAGCTGCCAGGCGGGCTTTTCTTCA TCAGCAAATACGCGCAGCAAAAATACGGTGAATCGGCAGAGGCTTATGGTCCCTTTGCATTTGCCGCAGCCAATCTGATC ATGGATGCCGTCGAGAAGGTCGGGCCGGATCGCAAAAAAGTGCGTGACGTTCTGAACAGGACCAAGGATGCGGACACCAT TGTTGGCAAGGTGACCTTTGACGATCATCGCCAGAACATCGTGCCGCTCATCACCAAGTACGTGGTGGAAAACGGTGCAT GGGTGGTTTGGGAAGACAGCAGCTACGGCAAGGGCAAGCACAAGCTGGCCGGTTTGTAA
Upstream 100 bases:
>100_bases CTTGCGAGTATTCAAGTGACTTGAATTCTATTCAATAGACTGGCAACCAGAATCATGTCACTTAATTCAAGTTCATCAAT TCACCCGAAAGGAAGCGACT
Downstream 100 bases:
>100_bases TCCCCAAGATGCCCTCCTGCACGCCATCGGCGACGCGGGAGGGTAACCCTCAATCGTTTCAGGAAACCTGATGAGTGAAG TTAGTCAATACATCTTCAAT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-BP [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MRRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAVRLRNQDPKSKYTYELVAQDD ECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVYNRFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAY KFMAGLGYKKWAIIHDTTDYGKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVRIR TQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYAQQKYGESAEAYGPFAFAAANLI MDAVEKVGPDRKKVRDVLNRTKDADTIVGKVTFDDHRQNIVPLITKYVVENGAWVVWEDSSYGKGKHKLAGL
Sequences:
>Translated_392_residues MRRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAVRLRNQDPKSKYTYELVAQDD ECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVYNRFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAY KFMAGLGYKKWAIIHDTTDYGKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVRIR TQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYAQQKYGESAEAYGPFAFAAANLI MDAVEKVGPDRKKVRDVLNRTKDADTIVGKVTFDDHRQNIVPLITKYVVENGAWVVWEDSSYGKGKHKLAGL >Mature_392_residues MRRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAVRLRNQDPKSKYTYELVAQDD ECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVYNRFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAY KFMAGLGYKKWAIIHDTTDYGKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVRIR TQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYAQQKYGESAEAYGPFAFAAANLI MDAVEKVGPDRKKVRDVLNRTKDADTIVGKVTFDDHRQNIVPLITKYVVENGAWVVWEDSSYGKGKHKLAGL
Specific function: This protein is a component of the leucine, isoleucine, valine, (threonine) transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=350, Percent_Identity=28.5714285714286, Blast_Score=118, Evalue=8e-28, Organism=Escherichia coli, GI1789867, Length=361, Percent_Identity=26.8698060941828, Blast_Score=111, Evalue=8e-26,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42568; Mature: 42568
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAV CCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEE RLRNQDPKSKYTYELVAQDDECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVYN EECCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH RFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAYKFMAGLGYKKWAIIHDTTDY HCCCHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCC GKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVRIR CCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH TQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYAQQ HHHHHCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH KYGESAEAYGPFAFAAANLIMDAVEKVGPDRKKVRDVLNRTKDADTIVGKVTFDDHRQNI HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHH VPLITKYVVENGAWVVWEDSSYGKGKHKLAGL HHHHHHHHHHCCCEEEECCCCCCCCCHHCCCC >Mature Secondary Structure MRRRNTILAGTALLTTCLSLALLASPVMAKEVVKIAFVGPLTGGVSNMGLGGRNSADLAV CCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEE RLRNQDPKSKYTYELVAQDDECKPNVGVQVATKVAADKNIVAGVTHYCSAVAMATAGVYN EECCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHH RFGMPAVVWGAVLPEVTYGNNFQEVHRVNGTMINQNEVAYKFMAGLGYKKWAIIHDTTDY HCCCHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCC GKGHNKYFSEFLKKGGGTVLGTFGVTADQQDFTTELTKIRELNPDVIYFGGLTPLGVRIR CCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH TQMEKLGIKAQFQGTSGIKSDAYIQGAGKELAEGTLSFIEGAPWEKLPGGLFFISKYAQQ HHHHHCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH KYGESAEAYGPFAFAAANLIMDAVEKVGPDRKKVRDVLNRTKDADTIVGKVTFDDHRQNI HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHH VPLITKYVVENGAWVVWEDSSYGKGKHKLAGL HHHHHHHHHHCCCEEEECCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA