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The map label for this gene is amaB [H]

Identifier: 91789186

GI number: 91789186

Start: 3523899

End: 3525209

Strand: Reverse

Name: amaB [H]

Synonym: Bpro_3330

Alternate gene names: 91789186

Gene position: 3525209-3523899 (Counterclockwise)

Preceding gene: 91789187

Following gene: 91789185

Centisome position: 67.79

GC content: 61.02

Gene sequence:

>1311_bases
ATGGATAAAGAATTGAATGTGACTAAACCAGAAAAACGAGACCAGACGACGGCCTGCGAACGTGCGCAGGACCATGTGCA
ACATGATCGCCTGCTGTCGGTCATTGCCGAGCTTGCGGCCTTTGGCGGACGGGCGGACGGAGGTGTTTCTCGCGAGACCC
TGACCGACATCGATCTCCAGGCGCGCCGCTATTTGATCGATCTGGCCCGTTCGCGCGGGTGCTCGGTAACGATCGATGAC
TGCGCCAATCTTTTTTTTCGTCGTCCGGGAACATCCGATTTGCCGCCGGTTCTGACCGGAAGCCATGCCGATACCCAGCC
CGTCGGTGGCAAGCTGGACGGGGCCTATGGCGTGCTTGCAGGCCTGGAGGTGATAGCTGCGTTGAACGATGCGGGCATCG
AGACCCTGCGGCCTGTCGAGGTCGTTGCGTGGACCAACGAAGAGGGGTGCCGCTTCGGTCCGGGTGCCATGGGCTCCAGC
GCCTTTGTCGCCCCGAGTTGTCTGCCCACCTATCGAAAATCTGTCGATGCCCGGGGTGTGAGTTTTGGGGACGCGTTGGA
CCTGGCCTTGCAGGCTGTACCGGATGTTCCCCGTCGGGCAATGGCCGAACCAATGTCTGCTTGCGTAGAGCTGCATATCG
AGCAAGGCCCTGTGCTGGAGCGTGCCCTTGTTCCGCTGGGCGTCGTCACAGGCATCCAGAGCGTACGCTGGTATCGCATC
CAGGTGACTGGCACTGCCGGCCATGCGGGCACCATGCCCATGGGCGAGCGCGCCGATGCCATGGCCGCTGCCGTCGGGCT
GGCGCAGCAGCTGTATGCCTATCAGGCGATGGAGGCTGGGGACAAATTGCGGCTGACGCTGGGCCGATGGCAGGTGAGTC
CGAATTCCATCAACACGATTCCCGGTGCTGTGGAGTTCACCGTCGATGTTCGCTGTGTCGATGAGCAGGTGTTGGGTCAG
TTCGAAGCGGCTTTGAAACAGATCACCCAAGCCTATTCCTGGGCAGGGCAGATTGAATTCGAGTCCCTTTTTTCGCGCCC
CCCGACGCATTTCCCTGCAGCGATGCTGGAGCTGATTGAGCAGGCCTGCACGCGCGCTTGCAGCAACGCTTCGCTCGCTG
CGCCCTTGCGGATGACGTCCGGCGCCTTTCATGACGCCATGTATCTCGCGGAGCATTGCCCGACAGCGATGATTTTTGTT
CCGAGCAAGGGGGGGATCAGTCACAATGCTGCGGAGGAAACCGCGCCTCATGAGCTGTTTCTGGGTGTTCAGGCGCTGGC
TTATGCTGTGACGTCGCTGGCCAATGCCTGA

Upstream 100 bases:

>100_bases
AGCACGGTATGCCCGTAGGCGTCACGGTCATAGGCCCGCGATGGGCTGATGCGCTGACATTGAGCGCAGCGCATACGCTG
GAGCTCAGTCTGAGCTGAAC

Downstream 100 bases:

>100_bases
CCCTCGGGAAAACAGATGGAGATGCTCGTGAAATCAAATATCGTTGCTGCGCCGACCCCGGAAGACGCTGCCGTCAAACC
ACCCTCCATGCTGGGTGTCC

Product: amidase, hydantoinase/carbamoylase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MDKELNVTKPEKRDQTTACERAQDHVQHDRLLSVIAELAAFGGRADGGVSRETLTDIDLQARRYLIDLARSRGCSVTIDD
CANLFFRRPGTSDLPPVLTGSHADTQPVGGKLDGAYGVLAGLEVIAALNDAGIETLRPVEVVAWTNEEGCRFGPGAMGSS
AFVAPSCLPTYRKSVDARGVSFGDALDLALQAVPDVPRRAMAEPMSACVELHIEQGPVLERALVPLGVVTGIQSVRWYRI
QVTGTAGHAGTMPMGERADAMAAAVGLAQQLYAYQAMEAGDKLRLTLGRWQVSPNSINTIPGAVEFTVDVRCVDEQVLGQ
FEAALKQITQAYSWAGQIEFESLFSRPPTHFPAAMLELIEQACTRACSNASLAAPLRMTSGAFHDAMYLAEHCPTAMIFV
PSKGGISHNAAEETAPHELFLGVQALAYAVTSLANA

Sequences:

>Translated_436_residues
MDKELNVTKPEKRDQTTACERAQDHVQHDRLLSVIAELAAFGGRADGGVSRETLTDIDLQARRYLIDLARSRGCSVTIDD
CANLFFRRPGTSDLPPVLTGSHADTQPVGGKLDGAYGVLAGLEVIAALNDAGIETLRPVEVVAWTNEEGCRFGPGAMGSS
AFVAPSCLPTYRKSVDARGVSFGDALDLALQAVPDVPRRAMAEPMSACVELHIEQGPVLERALVPLGVVTGIQSVRWYRI
QVTGTAGHAGTMPMGERADAMAAAVGLAQQLYAYQAMEAGDKLRLTLGRWQVSPNSINTIPGAVEFTVDVRCVDEQVLGQ
FEAALKQITQAYSWAGQIEFESLFSRPPTHFPAAMLELIEQACTRACSNASLAAPLRMTSGAFHDAMYLAEHCPTAMIFV
PSKGGISHNAAEETAPHELFLGVQALAYAVTSLANA
>Mature_436_residues
MDKELNVTKPEKRDQTTACERAQDHVQHDRLLSVIAELAAFGGRADGGVSRETLTDIDLQARRYLIDLARSRGCSVTIDD
CANLFFRRPGTSDLPPVLTGSHADTQPVGGKLDGAYGVLAGLEVIAALNDAGIETLRPVEVVAWTNEEGCRFGPGAMGSS
AFVAPSCLPTYRKSVDARGVSFGDALDLALQAVPDVPRRAMAEPMSACVELHIEQGPVLERALVPLGVVTGIQSVRWYRI
QVTGTAGHAGTMPMGERADAMAAAVGLAQQLYAYQAMEAGDKLRLTLGRWQVSPNSINTIPGAVEFTVDVRCVDEQVLGQ
FEAALKQITQAYSWAGQIEFESLFSRPPTHFPAAMLELIEQACTRACSNASLAAPLRMTSGAFHDAMYLAEHCPTAMIFV
PSKGGISHNAAEETAPHELFLGVQALAYAVTSLANA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=401, Percent_Identity=35.6608478802993, Blast_Score=199, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 46565; Mature: 46565

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKELNVTKPEKRDQTTACERAQDHVQHDRLLSVIAELAAFGGRADGGVSRETLTDIDLQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ARRYLIDLARSRGCSVTIDDCANLFFRRPGTSDLPPVLTGSHADTQPVGGKLDGAYGVLA
HHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
GLEVIAALNDAGIETLRPVEVVAWTNEEGCRFGPGAMGSSAFVAPSCLPTYRKSVDARGV
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
SFGDALDLALQAVPDVPRRAMAEPMSACVELHIEQGPVLERALVPLGVVTGIQSVRWYRI
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEE
QVTGTAGHAGTMPMGERADAMAAAVGLAQQLYAYQAMEAGDKLRLTLGRWQVSPNSINTI
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
PGAVEFTVDVRCVDEQVLGQFEAALKQITQAYSWAGQIEFESLFSRPPTHFPAAMLELIE
CCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCHHHHHHHHHH
QACTRACSNASLAAPLRMTSGAFHDAMYLAEHCPTAMIFVPSKGGISHNAAEETAPHELF
HHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHCCCHHHH
LGVQALAYAVTSLANA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKELNVTKPEKRDQTTACERAQDHVQHDRLLSVIAELAAFGGRADGGVSRETLTDIDLQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ARRYLIDLARSRGCSVTIDDCANLFFRRPGTSDLPPVLTGSHADTQPVGGKLDGAYGVLA
HHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
GLEVIAALNDAGIETLRPVEVVAWTNEEGCRFGPGAMGSSAFVAPSCLPTYRKSVDARGV
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
SFGDALDLALQAVPDVPRRAMAEPMSACVELHIEQGPVLERALVPLGVVTGIQSVRWYRI
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEE
QVTGTAGHAGTMPMGERADAMAAAVGLAQQLYAYQAMEAGDKLRLTLGRWQVSPNSINTI
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
PGAVEFTVDVRCVDEQVLGQFEAALKQITQAYSWAGQIEFESLFSRPPTHFPAAMLELIE
CCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCHHHHHHHHHH
QACTRACSNASLAAPLRMTSGAFHDAMYLAEHCPTAMIFVPSKGGISHNAAEETAPHELF
HHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHCCCHHHH
LGVQALAYAVTSLANA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]