| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bcr [H]
Identifier: 91789071
GI number: 91789071
Start: 3396954
End: 3398228
Strand: Direct
Name: bcr [H]
Synonym: Bpro_3211
Alternate gene names: 91789071
Gene position: 3396954-3398228 (Clockwise)
Preceding gene: 91789070
Following gene: 91789072
Centisome position: 65.32
GC content: 66.43
Gene sequence:
>1275_bases ATGCCCATCTCCTCCCAAAAACTGTCTTCCGAGGCTGCGCCGGCCGGCGCCGTCGTGGTACCGCCATCGATGTCGGCTGG CCTGATCGTGCTGATCCTGTCGATGCTGCTGGGCATCCAGCCGGTCACCACCGACCTCTACCTGCCCGCGCTGCCGGCGC TGACCGAAGGCTTTGCTGCCCCGATGTCGCAGGCGCAGCTCACGCTGAGTGCGCTGCTGCTGGCTTTCGGCGTCTCCCAG CTGATCTGGGGCCCGCTGTCCGACCGCTTTGGCCGGCGTCCCATCCTGTTGTGGGGCCTGGCCACTTACACGCTGGCCTC GATCGGCAGCACGCTGGCCCCCTCCATGGCGCTGCTGATCGTCTGGCGCATTGTGCAGGGCGCGGCCATGGGCGCGGTCG TGATGTGCGCACGCGCCATCGTGCGCGACCTGTACCACCCGGTTGAAGGCGCCCGCATCATGTCCAAGGGCCTGAGCGGC CTGGGCGTTCTGGCCTGCATCAGTGCCCCGCTGGGCGGCTTGCTGTCGGAGTTTTGGGGCTGGCGCGTCGCGCTGATGGC CCTGGCCGTATTTGGCGGCTGCACCCTGGCGCTGGTCGCGCTGCGTTTTGAAGAAACCCTGCGGCAGAAAAACCCGCAGG CGCTGCATCCGGCCACGCTGCTGCGCACCTGGATCCATATCCTCGGCAATCCCACCTTCCTGGTGTTCTCGGCGCTGGCC GCGGCGTCGTATGGCGGGCTGTTTACCTTTCTCGCCACGTCGTCGTTTGTGTTCATCAAGGTGCTGGGGCTGAGCAAAAC ACAGTACGGCCTGGTGATGTTTTCCATGTGCTTTTGCTACCTGACGGGCACCTTTATCTGCCGCCGCCTGCTGCCGCGTT TTGGCGTGCGCAAGTCGGTGGCGATTGCTGCAGGCCTGAGCGTTGCCGGCGGCACGCTGATGGGCATCTTCGCCTGGGCC GGCCTGAGCAACGTCTGGGCCATCATGCTGCCCTACTACCTCTTCATGCTGGCCCACGGCGTGCACCAGCCCTGCGGCCA GAGCGGTGCGGTGGGGCCCTTTCCGCACGCGGCAGGCGCGGCCTCGGCCATGAACGGCTTCCTGATGATGGTCCTGGCCT TTGGCATGGGCGGCTGGCTGGGCACGCAAATGGATGGCACCGTCCTGCCGCTGACCAACGGCGTATGGTTCTGGAGCGTG CTGGTGGCCGCCACCGCCTGGACCGTGGTGCAGAAATACGGAGAGCCTGCCCATGAGGCCGCCACCAAACCCTGA
Upstream 100 bases:
>100_bases CGCTGGCGCAGCTTTTCCAGCTGAAATAAGTCAGCCGCGCGCCCAGGCTGCCGTGCCTTTGCCACGCCTTGGTGGCGGGC AATCTGATACCCTCGAACGG
Downstream 100 bases:
>100_bases CGTGAAGCCGGAGACAAGCGTGGGAAGGCAATTTTCCGCCGGGCCGCCCCAAGGAAAATTAGCCCCCTCGGGGCTGGAGC CTGCGGCTCCAAGTCTGCTT
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MPISSQKLSSEAAPAGAVVVPPSMSAGLIVLILSMLLGIQPVTTDLYLPALPALTEGFAAPMSQAQLTLSALLLAFGVSQ LIWGPLSDRFGRRPILLWGLATYTLASIGSTLAPSMALLIVWRIVQGAAMGAVVMCARAIVRDLYHPVEGARIMSKGLSG LGVLACISAPLGGLLSEFWGWRVALMALAVFGGCTLALVALRFEETLRQKNPQALHPATLLRTWIHILGNPTFLVFSALA AASYGGLFTFLATSSFVFIKVLGLSKTQYGLVMFSMCFCYLTGTFICRRLLPRFGVRKSVAIAAGLSVAGGTLMGIFAWA GLSNVWAIMLPYYLFMLAHGVHQPCGQSGAVGPFPHAAGAASAMNGFLMMVLAFGMGGWLGTQMDGTVLPLTNGVWFWSV LVAATAWTVVQKYGEPAHEAATKP
Sequences:
>Translated_424_residues MPISSQKLSSEAAPAGAVVVPPSMSAGLIVLILSMLLGIQPVTTDLYLPALPALTEGFAAPMSQAQLTLSALLLAFGVSQ LIWGPLSDRFGRRPILLWGLATYTLASIGSTLAPSMALLIVWRIVQGAAMGAVVMCARAIVRDLYHPVEGARIMSKGLSG LGVLACISAPLGGLLSEFWGWRVALMALAVFGGCTLALVALRFEETLRQKNPQALHPATLLRTWIHILGNPTFLVFSALA AASYGGLFTFLATSSFVFIKVLGLSKTQYGLVMFSMCFCYLTGTFICRRLLPRFGVRKSVAIAAGLSVAGGTLMGIFAWA GLSNVWAIMLPYYLFMLAHGVHQPCGQSGAVGPFPHAAGAASAMNGFLMMVLAFGMGGWLGTQMDGTVLPLTNGVWFWSV LVAATAWTVVQKYGEPAHEAATKP >Mature_423_residues PISSQKLSSEAAPAGAVVVPPSMSAGLIVLILSMLLGIQPVTTDLYLPALPALTEGFAAPMSQAQLTLSALLLAFGVSQL IWGPLSDRFGRRPILLWGLATYTLASIGSTLAPSMALLIVWRIVQGAAMGAVVMCARAIVRDLYHPVEGARIMSKGLSGL GVLACISAPLGGLLSEFWGWRVALMALAVFGGCTLALVALRFEETLRQKNPQALHPATLLRTWIHILGNPTFLVFSALAA ASYGGLFTFLATSSFVFIKVLGLSKTQYGLVMFSMCFCYLTGTFICRRLLPRFGVRKSVAIAAGLSVAGGTLMGIFAWAG LSNVWAIMLPYYLFMLAHGVHQPCGQSGAVGPFPHAAGAASAMNGFLMMVLAFGMGGWLGTQMDGTVLPLTNGVWFWSVL VAATAWTVVQKYGEPAHEAATKP
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=381, Percent_Identity=27.5590551181102, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87082312, Length=323, Percent_Identity=30.6501547987616, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI48994889, Length=335, Percent_Identity=29.2537313432836, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1790146, Length=332, Percent_Identity=27.1084337349398, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790794, Length=231, Percent_Identity=28.1385281385281, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1787880, Length=176, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319517, Length=217, Percent_Identity=28.110599078341, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6324264, Length=164, Percent_Identity=31.0975609756098, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322071, Length=165, Percent_Identity=32.1212121212121, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44771; Mature: 44640
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISSQKLSSEAAPAGAVVVPPSMSAGLIVLILSMLLGIQPVTTDLYLPALPALTEGFAA CCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC PMSQAQLTLSALLLAFGVSQLIWGPLSDRFGRRPILLWGLATYTLASIGSTLAPSMALLI CHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH VWRIVQGAAMGAVVMCARAIVRDLYHPVEGARIMSKGLSGLGVLACISAPLGGLLSEFWG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WRVALMALAVFGGCTLALVALRFEETLRQKNPQALHPATLLRTWIHILGNPTFLVFSALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH AASYGGLFTFLATSSFVFIKVLGLSKTQYGLVMFSMCFCYLTGTFICRRLLPRFGVRKSV HHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AIAAGLSVAGGTLMGIFAWAGLSNVWAIMLPYYLFMLAHGVHQPCGQSGAVGPFPHAAGA HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH ASAMNGFLMMVLAFGMGGWLGTQMDGTVLPLTNGVWFWSVLVAATAWTVVQKYGEPAHEA HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHC ATKP CCCC >Mature Secondary Structure PISSQKLSSEAAPAGAVVVPPSMSAGLIVLILSMLLGIQPVTTDLYLPALPALTEGFAA CCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC PMSQAQLTLSALLLAFGVSQLIWGPLSDRFGRRPILLWGLATYTLASIGSTLAPSMALLI CHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH VWRIVQGAAMGAVVMCARAIVRDLYHPVEGARIMSKGLSGLGVLACISAPLGGLLSEFWG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WRVALMALAVFGGCTLALVALRFEETLRQKNPQALHPATLLRTWIHILGNPTFLVFSALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH AASYGGLFTFLATSSFVFIKVLGLSKTQYGLVMFSMCFCYLTGTFICRRLLPRFGVRKSV HHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AIAAGLSVAGGTLMGIFAWAGLSNVWAIMLPYYLFMLAHGVHQPCGQSGAVGPFPHAAGA HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH ASAMNGFLMMVLAFGMGGWLGTQMDGTVLPLTNGVWFWSVLVAATAWTVVQKYGEPAHEA HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHC ATKP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]