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The map label for this gene is yfhR [C]

Identifier: 91789070

GI number: 91789070

Start: 3396025

End: 3396882

Strand: Direct

Name: yfhR [C]

Synonym: Bpro_3210

Alternate gene names: 91789070

Gene position: 3396025-3396882 (Clockwise)

Preceding gene: 91789069

Following gene: 91789071

Centisome position: 65.3

GC content: 63.64

Gene sequence:

>858_bases
ATGAAACGCTGGCACCTCTTCACTTCCTTCTGCGCGGCGCTGGCCTTGATGGCGGGTTGCGCCACGCTCGACGAAAAGCA
GCGCGACTGGATCTTCCAGCCCAGCGACCGCACCTGGAGCGGAGGCGCCGCAGCCGCCGAGGGCATGGAGGACGTCTGGA
TCAAGTTCAATTCCAGAATCAACGACCAGAACATCCGCCTTCATGGGCTCTGGTTGCCCGCCGACACAGACAGGGACAGG
CCGCAAGCCGGCAAGGCGCCCGTCATGCTTTACCTGCACGGTGCGCGTTACAACGTCACCGGTTCCGCCCCGCGCATGCG
GCGCATGCAGGAACTGGGCTTTTCGGTGCTGGCCATCGACTACCGCGGCTTTGGCAAAAGCACCCACGAGCTGCCTTCGG
AGGCCTCGGCCTATGAAGACGCCCGCGTCGCCTGGGACTGGCTGGCACAGAAGTATCCCAACCGGCCGCGCTATATCTTC
GGCCACTCGCTGGGCGGGCCGATTGCCATCAACCTGGCCAACGAGGTCGCTGACGAAAGCGGCACCATCGTCGAAGGCAC
CTTCACCTCGATAGCCGACGTGGTGAGCACGTCCAAATGGGGCTGGATGCCGCTGTCGCTGCTGATCACCCAGCGCTTTG
AAGCCGTGCACAAGGTGGCGACGATTGGTTCACCTCTTCTGGTCGTCCATGGCGGCGAAGACCGCCTGATCCTGCCCGAC
CTGGGGCGCAAGCTGTTTGACGCAGCGACCCAGCCCAAGCTGTTCATGCTGGTCGAGGGCGGCTCGCACCACAATACCAA
CCTGGTCGGCCAGCCGCAGTACCGGCAGGCGCTGGCGCAGCTTTTCCAGCTGAAATAA

Upstream 100 bases:

>100_bases
ACGGGCGGCCCACCTGGCGGCAGGTGAGCATCCGGGAGCTGGACGCCCTGTTTCTGCGCGGGCGCTGAACTTTCCGCCCG
CCCGCGTATCACTTATCTGC

Downstream 100 bases:

>100_bases
GTCAGCCGCGCGCCCAGGCTGCCGTGCCTTTGCCACGCCTTGGTGGCGGGCAATCTGATACCCTCGAACGGATGCCCATC
TCCTCCCAAAAACTGTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKRWHLFTSFCAALALMAGCATLDEKQRDWIFQPSDRTWSGGAAAAEGMEDVWIKFNSRINDQNIRLHGLWLPADTDRDR
PQAGKAPVMLYLHGARYNVTGSAPRMRRMQELGFSVLAIDYRGFGKSTHELPSEASAYEDARVAWDWLAQKYPNRPRYIF
GHSLGGPIAINLANEVADESGTIVEGTFTSIADVVSTSKWGWMPLSLLITQRFEAVHKVATIGSPLLVVHGGEDRLILPD
LGRKLFDAATQPKLFMLVEGGSHHNTNLVGQPQYRQALAQLFQLK

Sequences:

>Translated_285_residues
MKRWHLFTSFCAALALMAGCATLDEKQRDWIFQPSDRTWSGGAAAAEGMEDVWIKFNSRINDQNIRLHGLWLPADTDRDR
PQAGKAPVMLYLHGARYNVTGSAPRMRRMQELGFSVLAIDYRGFGKSTHELPSEASAYEDARVAWDWLAQKYPNRPRYIF
GHSLGGPIAINLANEVADESGTIVEGTFTSIADVVSTSKWGWMPLSLLITQRFEAVHKVATIGSPLLVVHGGEDRLILPD
LGRKLFDAATQPKLFMLVEGGSHHNTNLVGQPQYRQALAQLFQLK
>Mature_285_residues
MKRWHLFTSFCAALALMAGCATLDEKQRDWIFQPSDRTWSGGAAAAEGMEDVWIKFNSRINDQNIRLHGLWLPADTDRDR
PQAGKAPVMLYLHGARYNVTGSAPRMRRMQELGFSVLAIDYRGFGKSTHELPSEASAYEDARVAWDWLAQKYPNRPRYIF
GHSLGGPIAINLANEVADESGTIVEGTFTSIADVVSTSKWGWMPLSLLITQRFEAVHKVATIGSPLLVVHGGEDRLILPD
LGRKLFDAATQPKLFMLVEGGSHHNTNLVGQPQYRQALAQLFQLK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.pombe bem46 and yeast YNL320w [H]

Homologues:

Organism=Homo sapiens, GI109689718, Length=191, Percent_Identity=29.8429319371728, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI24308097, Length=191, Percent_Identity=29.8429319371728, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI32528310, Length=183, Percent_Identity=30.6010928961749, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI49355781, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI32451492, Length=183, Percent_Identity=30.6010928961749, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI71051602, Length=265, Percent_Identity=26.4150943396226, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI71051600, Length=174, Percent_Identity=29.8850574712644, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI226510965, Length=257, Percent_Identity=26.0700389105058, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17566318, Length=200, Percent_Identity=24.5, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17137566, Length=229, Percent_Identity=28.3842794759825, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24655467, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24655464, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 31793; Mature: 31793

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWHLFTSFCAALALMAGCATLDEKQRDWIFQPSDRTWSGGAAAAEGMEDVWIKFNSRI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHCCCCEEEEEECCCC
NDQNIRLHGLWLPADTDRDRPQAGKAPVMLYLHGARYNVTGSAPRMRRMQELGFSVLAID
CCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHHHCCCEEEEEE
YRGFGKSTHELPSEASAYEDARVAWDWLAQKYPNRPRYIFGHSLGGPIAINLANEVADES
ECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHCCCC
GTIVEGTFTSIADVVSTSKWGWMPLSLLITQRFEAVHKVATIGSPLLVVHGGEDRLILPD
CCEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECHH
LGRKLFDAATQPKLFMLVEGGSHHNTNLVGQPQYRQALAQLFQLK
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKRWHLFTSFCAALALMAGCATLDEKQRDWIFQPSDRTWSGGAAAAEGMEDVWIKFNSRI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHCCCCEEEEEECCCC
NDQNIRLHGLWLPADTDRDRPQAGKAPVMLYLHGARYNVTGSAPRMRRMQELGFSVLAID
CCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHHHCCCEEEEEE
YRGFGKSTHELPSEASAYEDARVAWDWLAQKYPNRPRYIFGHSLGGPIAINLANEVADES
ECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHCCCC
GTIVEGTFTSIADVVSTSKWGWMPLSLLITQRFEAVHKVATIGSPLLVVHGGEDRLILPD
CCEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECHH
LGRKLFDAATQPKLFMLVEGGSHHNTNLVGQPQYRQALAQLFQLK
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]