| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is thlA [H]
Identifier: 91788973
GI number: 91788973
Start: 3286818
End: 3288068
Strand: Direct
Name: thlA [H]
Synonym: Bpro_3113
Alternate gene names: 91788973
Gene position: 3286818-3288068 (Clockwise)
Preceding gene: 91788972
Following gene: 91788974
Centisome position: 63.2
GC content: 65.79
Gene sequence:
>1251_bases ATGGCCACCCCAGGCTTTTTCTCCCACTTTGACGACATCTGGATGCTGGACGGCGTGCGCACGCCCATGGTCGATTACTG TGGCGCACTCGGCCACATTTCGCCCACGGACCTGGGCATCAAGGCCGCGCGCTCCGCCCTGGAACGCAGCGGCGTGCCAG CCGCGCATATCGGCTCCGTCATTGCCGGCAACATGGCGCCGGGCGACTTTGACCAGTTCATGCTGCCGCGCCACATTGGC CTGTATGCGGGCGTACCGCTGGAGGTGCCTGCCCTGATGGCGCAGCGTATTTGCGGCACCGGTTTTGAGCTGTTCCGGCA GGCCGGCGAGCACATCCAGAGCGGCGCCTGCGAGGCGGCCCTGGTGGTGGGCGCCGAGAGCATGACGCGCAACCCGATTG CCGCCTTTGACCACCGCACCGGCTTCAAACTGGGCGCGCCGGTCGGTTTCAAGGACTACATGTGGGAGGCCTTGAAAGAC TCGGCGGCGGGTATCAACATGATCCAGACGGCCGAGAACCTGGCCAAAAAATACGGCGTCACGCGCGAGCAGGTCGACGA ATTTGCCTCGCAATCGTTTGCCAGGGCCGTCGCAGCGCAGCAATCCGGCTTCCACGCGGGCGAGATCGTGCCGGTGGTGT CTGAAACATTCGGGCTTGAAGGCTACGCATCGCGCAGTATCAAGCTGCAGGGCAAGCTCACCGAAGTGGCGCAGGACACC CACGCCCGCATTTCACCCGCCGAGGTGCTGGCCAAACTCCGCCCGGTGTATGAAGGCGGCGTCCAGACCGGTGGCAACAG CGCGGCGCTGGTCGATGCGGCTGCGGCGGCCATTGTGGCCTCCGGCAGCTATGCCAAAGCCCATGACAAAAAGCCACTCG CACGCGTGGTTGCCGCCGCCGTGGTGGGCGTGCCACCCGAGATCATGGGCATCGGCCCGGCACCAGCCATTCGCCTGCTG CTGGAGCGCACCGGCATGACGCTGGACCAGATTGGCCGCTTCGAGATCAATGAAGCCCAAGGCGCGCAAACATTGGCCGT AGGCCGCGAGCTGGAACTGGATTTGAACAGGCTCAACGTCAACGGCGGCGCCATCGCACTCGGCCATCCGCTCGCCACCA CCGGCGTGCGCCTGACCATCACGCTGGCGCGCGAACTCAGGCGTGCCGGTCTGCGCTGGGGCATTGCATCGGCCTGCATT GGCGGCGGACAGGGCATCGCCTTGCTGCTGGAAAACCCGGGCGCGGCCTGA
Upstream 100 bases:
>100_bases GCGCGCCGTGCTGGCGCACCGCGCCGAAACGGTAGAGGCGTTGCATGCCGACAGGCTGCACACCATCCTGAAACCACAAG CGCTTTAAAGGAACCCCCTC
Downstream 100 bases:
>100_bases CGCAACCAAATAGCAAACCAGTAGCGAACTAATAGCGAACTAATAGCGAACCAGTAGTAGCAAACCAGAATTTTTGAAAG CCTGACATGAATATTCAAGG
Product: Acetyl-CoA C-acyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MATPGFFSHFDDIWMLDGVRTPMVDYCGALGHISPTDLGIKAARSALERSGVPAAHIGSVIAGNMAPGDFDQFMLPRHIG LYAGVPLEVPALMAQRICGTGFELFRQAGEHIQSGACEAALVVGAESMTRNPIAAFDHRTGFKLGAPVGFKDYMWEALKD SAAGINMIQTAENLAKKYGVTREQVDEFASQSFARAVAAQQSGFHAGEIVPVVSETFGLEGYASRSIKLQGKLTEVAQDT HARISPAEVLAKLRPVYEGGVQTGGNSAALVDAAAAAIVASGSYAKAHDKKPLARVVAAAVVGVPPEIMGIGPAPAIRLL LERTGMTLDQIGRFEINEAQGAQTLAVGRELELDLNRLNVNGGAIALGHPLATTGVRLTITLARELRRAGLRWGIASACI GGGQGIALLLENPGAA
Sequences:
>Translated_416_residues MATPGFFSHFDDIWMLDGVRTPMVDYCGALGHISPTDLGIKAARSALERSGVPAAHIGSVIAGNMAPGDFDQFMLPRHIG LYAGVPLEVPALMAQRICGTGFELFRQAGEHIQSGACEAALVVGAESMTRNPIAAFDHRTGFKLGAPVGFKDYMWEALKD SAAGINMIQTAENLAKKYGVTREQVDEFASQSFARAVAAQQSGFHAGEIVPVVSETFGLEGYASRSIKLQGKLTEVAQDT HARISPAEVLAKLRPVYEGGVQTGGNSAALVDAAAAAIVASGSYAKAHDKKPLARVVAAAVVGVPPEIMGIGPAPAIRLL LERTGMTLDQIGRFEINEAQGAQTLAVGRELELDLNRLNVNGGAIALGHPLATTGVRLTITLARELRRAGLRWGIASACI GGGQGIALLLENPGAA >Mature_415_residues ATPGFFSHFDDIWMLDGVRTPMVDYCGALGHISPTDLGIKAARSALERSGVPAAHIGSVIAGNMAPGDFDQFMLPRHIGL YAGVPLEVPALMAQRICGTGFELFRQAGEHIQSGACEAALVVGAESMTRNPIAAFDHRTGFKLGAPVGFKDYMWEALKDS AAGINMIQTAENLAKKYGVTREQVDEFASQSFARAVAAQQSGFHAGEIVPVVSETFGLEGYASRSIKLQGKLTEVAQDTH ARISPAEVLAKLRPVYEGGVQTGGNSAALVDAAAAAIVASGSYAKAHDKKPLARVVAAAVVGVPPEIMGIGPAPAIRLLL ERTGMTLDQIGRFEINEAQGAQTLAVGRELELDLNRLNVNGGAIALGHPLATTGVRLTITLARELRRAGLRWGIASACIG GGQGIALLLENPGAA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI167614485, Length=402, Percent_Identity=40.7960199004975, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI148539872, Length=405, Percent_Identity=36.0493827160494, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI4501853, Length=408, Percent_Identity=34.5588235294118, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI4557237, Length=406, Percent_Identity=29.5566502463054, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI4504327, Length=436, Percent_Identity=27.5229357798165, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI194353979, Length=91, Percent_Identity=47.2527472527472, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI87082165, Length=408, Percent_Identity=37.2549019607843, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1787663, Length=418, Percent_Identity=36.8421052631579, Blast_Score=222, Evalue=4e-59, Organism=Escherichia coli, GI1788554, Length=405, Percent_Identity=35.8024691358025, Blast_Score=214, Evalue=6e-57, Organism=Escherichia coli, GI48994986, Length=410, Percent_Identity=36.8292682926829, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI1788683, Length=442, Percent_Identity=30.5429864253394, Blast_Score=138, Evalue=8e-34, Organism=Caenorhabditis elegans, GI133906874, Length=401, Percent_Identity=43.3915211970075, Blast_Score=305, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17535921, Length=403, Percent_Identity=32.7543424317618, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI25147385, Length=400, Percent_Identity=27.5, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17551802, Length=440, Percent_Identity=26.8181818181818, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17535917, Length=405, Percent_Identity=23.9506172839506, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322031, Length=339, Percent_Identity=34.2182890855457, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6325229, Length=408, Percent_Identity=29.4117647058824, Blast_Score=159, Evalue=7e-40, Organism=Drosophila melanogaster, GI17648125, Length=402, Percent_Identity=43.0348258706468, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI24655093, Length=404, Percent_Identity=36.6336633663366, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24640423, Length=414, Percent_Identity=29.2270531400966, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17137578, Length=441, Percent_Identity=28.3446712018141, Blast_Score=135, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 43509; Mature: 43378
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPGFFSHFDDIWMLDGVRTPMVDYCGALGHISPTDLGIKAARSALERSGVPAAHIGSV CCCCCCHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH IAGNMAPGDFDQFMLPRHIGLYAGVPLEVPALMAQRICGTGFELFRQAGEHIQSGACEAA HCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEE LVVGAESMTRNPIAAFDHRTGFKLGAPVGFKDYMWEALKDSAAGINMIQTAENLAKKYGV EEECCHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC TREQVDEFASQSFARAVAAQQSGFHAGEIVPVVSETFGLEGYASRSIKLQGKLTEVAQDT CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCEEEEECHHHHHHHHH HARISPAEVLAKLRPVYEGGVQTGGNSAALVDAAAAAIVASGSYAKAHDKKPLARVVAAA HCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VVGVPPEIMGIGPAPAIRLLLERTGMTLDQIGRFEINEAQGAQTLAVGRELELDLNRLNV HHCCCHHHCCCCCHHHHHHHHHHHCCCHHHCCCEEECCCCCCEEECCCCEEEEEEEEEEC NGGAIALGHPLATTGVRLTITLARELRRAGLRWGIASACIGGGQGIALLLENPGAA CCCEEEECCCCHHCCEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure ATPGFFSHFDDIWMLDGVRTPMVDYCGALGHISPTDLGIKAARSALERSGVPAAHIGSV CCCCCHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH IAGNMAPGDFDQFMLPRHIGLYAGVPLEVPALMAQRICGTGFELFRQAGEHIQSGACEAA HCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEE LVVGAESMTRNPIAAFDHRTGFKLGAPVGFKDYMWEALKDSAAGINMIQTAENLAKKYGV EEECCHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC TREQVDEFASQSFARAVAAQQSGFHAGEIVPVVSETFGLEGYASRSIKLQGKLTEVAQDT CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCEEEEECHHHHHHHHH HARISPAEVLAKLRPVYEGGVQTGGNSAALVDAAAAAIVASGSYAKAHDKKPLARVVAAA HCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VVGVPPEIMGIGPAPAIRLLLERTGMTLDQIGRFEINEAQGAQTLAVGRELELDLNRLNV HHCCCHHHCCCCCHHHHHHHHHHHCCCHHHCCCEEECCCCCCEEECCCCEEEEEEEEEEC NGGAIALGHPLATTGVRLTITLARELRRAGLRWGIASACIGGGQGIALLLENPGAA CCCEEEECCCCHHCCEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]