BacMap

Definition	Polaromonas sp. JS666 chromosome, complete genome.
Accession	NC_007948
Length	5,200,264

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 91788974

GI number: 91788974

Start: 3288155

End: 3288940

Strand: Direct

Name: fabG [H]

Synonym: Bpro_3114

Alternate gene names: 91788974

Gene position: 3288155-3288940 (Clockwise)

Preceding gene: 91788973

Following gene: 91788975

Centisome position: 63.23

GC content: 65.52

Gene sequence:

>786_bases
ATGAATATTCAAGGACAAGCCGCCCTGGTCACCGGCGCAGGCTCCGGACTCGGGGAAGCCACTGCGCGCGAGCTGGCCCG
TCTGGGCGCGAAAGTCGCGGTGCTTGACGTGAATCTCGCCAACGCCGACAAGGTCGCCGCCGAAATCAACGCGGCGCACG
GAGACGGCAGCGCCATAGCCTGCCAATGCGACATCACCGACACCGAAAGCCTGCAGGCTGCCATCGCCAAAGCGACGGCC
GCGCATGGCACTGCCCGCATTCTGATGAGCATTGCCGGTATAGGCAGTGCCAAACGCGTGGTCAGCCGCGACGGCTCACC
GGCCCCGCTGGAGGACTTTGTGCGCGTGGTGAACGTCAACCTGATCGGCACCTACAACGTGGCCCGCCTGTTTGCGGCAG
AGTGCGCCAAGCTGGCGCCGCAGGAGGACGGCGAGCGCGGTGTGATGGTCTTCACCGCCTCGGTGGCCGCCTTTGATGGC
CAGGTCGGCCAGCAAGCCTACAGCGCGTCCAAGAGTGGGGTCGTCGGCATGACCTTACCCATGGCCCGCGACCTGGCGCA
GCACGGTATTCGGGTTTGCACCATCGCCCCCGGCCTGTTTGCAACACCGCTGATGAGAACCCTGCCCGAGCCGGTGCAGC
AGTCGCTGGCCGACAGCATTCCGTTTCCTCCGCGCCTGGGCAAACCGGAAGAGTTCGCCCAACTGGCCAGCCACATCGTC
ACCAACATGCACCTGAACGGCGAAGTGATTCGTCTCGACGGCGCTCTGCGCATGGCGCCACGCTGA

Upstream 100 bases:

>100_bases
CGGGCGCGGCCTGACGCAACCAAATAGCAAACCAGTAGCGAACTAATAGCGAACTAATAGCGAACCAGTAGTAGCAAACC
AGAATTTTTGAAAGCCTGAC

Downstream 100 bases:

>100_bases
CCCGGGAGCCCTTCATGAGCAAGACCACCGTCTACGACATCAAGGTGCAGTTCGGCGACTGCGACCCGGCCGGCATCGTG
TTCTTCCCCAACTTTTCGAA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNIQGQAALVTGAGSGLGEATARELARLGAKVAVLDVNLANADKVAAEINAAHGDGSAIACQCDITDTESLQAAIAKATA
AHGTARILMSIAGIGSAKRVVSRDGSPAPLEDFVRVVNVNLIGTYNVARLFAAECAKLAPQEDGERGVMVFTASVAAFDG
QVGQQAYSASKSGVVGMTLPMARDLAQHGIRVCTIAPGLFATPLMRTLPEPVQQSLADSIPFPPRLGKPEEFAQLASHIV
TNMHLNGEVIRLDGALRMAPR

Sequences:

>Translated_261_residues
MNIQGQAALVTGAGSGLGEATARELARLGAKVAVLDVNLANADKVAAEINAAHGDGSAIACQCDITDTESLQAAIAKATA
AHGTARILMSIAGIGSAKRVVSRDGSPAPLEDFVRVVNVNLIGTYNVARLFAAECAKLAPQEDGERGVMVFTASVAAFDG
QVGQQAYSASKSGVVGMTLPMARDLAQHGIRVCTIAPGLFATPLMRTLPEPVQQSLADSIPFPPRLGKPEEFAQLASHIV
TNMHLNGEVIRLDGALRMAPR
>Mature_261_residues
MNIQGQAALVTGAGSGLGEATARELARLGAKVAVLDVNLANADKVAAEINAAHGDGSAIACQCDITDTESLQAAIAKATA
AHGTARILMSIAGIGSAKRVVSRDGSPAPLEDFVRVVNVNLIGTYNVARLFAAECAKLAPQEDGERGVMVFTASVAAFDG
QVGQQAYSASKSGVVGMTLPMARDLAQHGIRVCTIAPGLFATPLMRTLPEPVQQSLADSIPFPPRLGKPEEFAQLASHIV
TNMHLNGEVIRLDGALRMAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4758504, Length=260, Percent_Identity=50, Blast_Score=234, Evalue=4e-62,
Organism=Homo sapiens, GI83715985, Length=260, Percent_Identity=46.9230769230769, Blast_Score=212, Evalue=3e-55,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=30.8880308880309, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=29.4820717131474, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI31542939, Length=232, Percent_Identity=27.1551724137931, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=28.3464566929134, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI32483357, Length=258, Percent_Identity=28.6821705426357, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI33667109, Length=204, Percent_Identity=30.3921568627451, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI224922801, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=27.5193798449612, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=25.5725190839695, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI4504505, Length=228, Percent_Identity=30.7017543859649, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI109715829, Length=250, Percent_Identity=27.2, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87082100, Length=265, Percent_Identity=30.5660377358491, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787905, Length=237, Percent_Identity=32.0675105485232, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787335, Length=260, Percent_Identity=28.8461538461538, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789057, Length=230, Percent_Identity=32.1739130434783, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789208, Length=262, Percent_Identity=28.2442748091603, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082160, Length=261, Percent_Identity=29.5019157088123, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786812, Length=269, Percent_Identity=28.6245353159851, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790717, Length=267, Percent_Identity=23.9700374531835, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=47.265625, Blast_Score=216, Evalue=9e-57,
Organism=Caenorhabditis elegans, GI25147288, Length=258, Percent_Identity=28.2945736434109, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17555706, Length=262, Percent_Identity=29.0076335877863, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17567345, Length=211, Percent_Identity=30.8056872037915, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=208, Percent_Identity=27.4038461538462, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=249, Percent_Identity=28.5140562248996, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=27.7566539923954, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=229, Percent_Identity=26.6375545851528, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=230, Percent_Identity=26.5217391304348, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=25.4752851711027, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=250, Percent_Identity=30, Blast_Score=77, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6320089, Length=250, Percent_Identity=25.2, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17737361, Length=259, Percent_Identity=50.5791505791506, Blast_Score=242, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24639444, Length=258, Percent_Identity=35.2713178294574, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI21357041, Length=243, Percent_Identity=29.6296296296296, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355319, Length=258, Percent_Identity=29.4573643410853, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24644339, Length=241, Percent_Identity=29.4605809128631, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571526, Length=240, Percent_Identity=27.0833333333333, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24649181, Length=204, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581726, Length=229, Percent_Identity=29.2576419213974, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24665243, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI221331218, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24640492, Length=210, Percent_Identity=25.2380952380952, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665247, Length=215, Percent_Identity=25.1162790697674, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221331216, Length=215, Percent_Identity=25.1162790697674, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26989; Mature: 26989

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQGQAALVTGAGSGLGEATARELARLGAKVAVLDVNLANADKVAAEINAAHGDGSAIA
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEE
CQCDITDTESLQAAIAKATAAHGTARILMSIAGIGSAKRVVSRDGSPAPLEDFVRVVNVN
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHEE
LIGTYNVARLFAAECAKLAPQEDGERGVMVFTASVAAFDGQVGQQAYSASKSGVVGMTLP
EEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHCCHHHHHHHHCCCCCEEEEEHH
MARDLAQHGIRVCTIAPGLFATPLMRTLPEPVQQSLADSIPFPPRLGKPEEFAQLASHIV
HHHHHHHCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
TNMHLNGEVIRLDGALRMAPR
HHCCCCCEEEEECCCEECCCC
>Mature Secondary Structure
MNIQGQAALVTGAGSGLGEATARELARLGAKVAVLDVNLANADKVAAEINAAHGDGSAIA
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEE
CQCDITDTESLQAAIAKATAAHGTARILMSIAGIGSAKRVVSRDGSPAPLEDFVRVVNVN
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHEE
LIGTYNVARLFAAECAKLAPQEDGERGVMVFTASVAAFDGQVGQQAYSASKSGVVGMTLP
EEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHCCHHHHHHHHCCCCCEEEEEHH
MARDLAQHGIRVCTIAPGLFATPLMRTLPEPVQQSLADSIPFPPRLGKPEEFAQLASHIV
HHHHHHHCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
TNMHLNGEVIRLDGALRMAPR
HHCCCCCEEEEECCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]