| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is paaF [C]
Identifier: 91788971
GI number: 91788971
Start: 3284062
End: 3284856
Strand: Direct
Name: paaF [C]
Synonym: Bpro_3111
Alternate gene names: 91788971
Gene position: 3284062-3284856 (Clockwise)
Preceding gene: 91788970
Following gene: 91788972
Centisome position: 63.15
GC content: 65.03
Gene sequence:
>795_bases ATGACTTCCAACACCTCTTCCACCGACATCCAGCTAGACATTCGCGGCGCGCATCAAGAGATCGCAGTGATCCGCCTGAG CCGCGTTGCCAAACGTAATGCCGTCAACGACAGCCTGATTCTGGCCTTGCGTGACATCTTCGAAAAACTGCCCACAACCG TCCGTGCTGCCGTGATCCACGGCGAGGGCGAGCACTTCTGCGCCGGCCTGGACCTGGGCGAACTGGAGGAGCGCGACGCC GGCCAGGGCATGCACCATTCGCGCATGTGGCACGCCGCGCTCGAACGGGTGCAGTTCGGCCCGGTTCCGGTGATTGCCGC GCTGCAAGGCGCCGTGGTCGGCGGCGGACTAGAGCTGGCCAGCGCCTGCCATATCCGCGTAGCCGATGAGACTGCCTTCT ATGCGCTGCCGGAGGGCTCTCGCGGCATTTTTGTCGGCGGTGGCGGATCGGTTCGCATCCCCAAGCTGATAGGCGTCGCA CGCATGACCGACATGATGCTGACCGGCCGGGTCTACAACGCACAAGACGGCGAGCGCGCCGGCTTTGCGCAGTACCTCGT ACCCGAGGGCCAAGCCTTCGACAAGGCCATGGAACTGGCCGCACGTGTGGCGCAAAACGCCCCCCTGACGAATTACGCAC TGATGCATGCCCTGCCCCGGATTGCCGAGCAGCCGGCCGAGCAGGGCTACCTGACGGAAGCCCTGATGGCGGCCATTGCC CAAAGCGCGCCTGAGGCCAAGGACCGGGTCCGCGCCTTCCTCGAAGGCCGGGCTGCCAAGGTGCAGAAAAGCTGA
Upstream 100 bases:
>100_bases TTCTTATGGCATGCGGGTTAACACCGATAAAACAGGCTGAAAAGGCAATTGAATTAGTTATGTTTTATAACCACAATTCA CCCACCAACCAAAGCTGACC
Downstream 100 bases:
>100_bases AGCCGCGCGGCCCAGCACGGAACGACATATCACCCCATCACGCAACAAGCACAACAAGAAAAACGCGAGCACGCCCGGAA GAGACAAGCATGACCAGCCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTSNTSSTDIQLDIRGAHQEIAVIRLSRVAKRNAVNDSLILALRDIFEKLPTTVRAAVIHGEGEHFCAGLDLGELEERDA GQGMHHSRMWHAALERVQFGPVPVIAALQGAVVGGGLELASACHIRVADETAFYALPEGSRGIFVGGGGSVRIPKLIGVA RMTDMMLTGRVYNAQDGERAGFAQYLVPEGQAFDKAMELAARVAQNAPLTNYALMHALPRIAEQPAEQGYLTEALMAAIA QSAPEAKDRVRAFLEGRAAKVQKS
Sequences:
>Translated_264_residues MTSNTSSTDIQLDIRGAHQEIAVIRLSRVAKRNAVNDSLILALRDIFEKLPTTVRAAVIHGEGEHFCAGLDLGELEERDA GQGMHHSRMWHAALERVQFGPVPVIAALQGAVVGGGLELASACHIRVADETAFYALPEGSRGIFVGGGGSVRIPKLIGVA RMTDMMLTGRVYNAQDGERAGFAQYLVPEGQAFDKAMELAARVAQNAPLTNYALMHALPRIAEQPAEQGYLTEALMAAIA QSAPEAKDRVRAFLEGRAAKVQKS >Mature_263_residues TSNTSSTDIQLDIRGAHQEIAVIRLSRVAKRNAVNDSLILALRDIFEKLPTTVRAAVIHGEGEHFCAGLDLGELEERDAG QGMHHSRMWHAALERVQFGPVPVIAALQGAVVGGGLELASACHIRVADETAFYALPEGSRGIFVGGGGSVRIPKLIGVAR MTDMMLTGRVYNAQDGERAGFAQYLVPEGQAFDKAMELAARVAQNAPLTNYALMHALPRIAEQPAEQGYLTEALMAAIAQ SAPEAKDRVRAFLEGRAAKVQKS
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=254, Percent_Identity=30.3149606299213, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI68989263, Length=225, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI70995211, Length=213, Percent_Identity=28.169014084507, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI20127408, Length=256, Percent_Identity=28.90625, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4502327, Length=262, Percent_Identity=30.1526717557252, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI31542718, Length=242, Percent_Identity=26.0330578512397, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1787659, Length=244, Percent_Identity=31.1475409836066, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI221142681, Length=232, Percent_Identity=33.1896551724138, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788682, Length=147, Percent_Identity=34.6938775510204, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790281, Length=128, Percent_Identity=30.46875, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17560910, Length=214, Percent_Identity=32.2429906542056, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17540714, Length=215, Percent_Identity=30.2325581395349, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=28.0155642023346, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17554946, Length=252, Percent_Identity=29.7619047619048, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17558304, Length=173, Percent_Identity=30.635838150289, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17508951, Length=157, Percent_Identity=33.7579617834395, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI25144276, Length=157, Percent_Identity=33.7579617834395, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17508953, Length=157, Percent_Identity=33.7579617834395, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536985, Length=250, Percent_Identity=26.8, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17534483, Length=266, Percent_Identity=24.0601503759398, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI20129971, Length=263, Percent_Identity=28.1368821292776, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24653477, Length=263, Percent_Identity=28.1368821292776, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24653139, Length=260, Percent_Identity=31.1538461538462, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI21357171, Length=203, Percent_Identity=30.0492610837438, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI19920382, Length=215, Percent_Identity=28.8372093023256, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24650670, Length=204, Percent_Identity=29.9019607843137, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI19921000, Length=170, Percent_Identity=36.4705882352941, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24583077, Length=170, Percent_Identity=36.4705882352941, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24583079, Length=170, Percent_Identity=36.4705882352941, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28308; Mature: 28177
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNTSSTDIQLDIRGAHQEIAVIRLSRVAKRNAVNDSLILALRDIFEKLPTTVRAAVIH CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEEE GEGEHFCAGLDLGELEERDAGQGMHHSRMWHAALERVQFGPVPVIAALQGAVVGGGLELA CCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH SACHIRVADETAFYALPEGSRGIFVGGGGSVRIPKLIGVARMTDMMLTGRVYNAQDGERA CEEEEEEECCCEEEECCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHCEEECCCCCCCC GFAQYLVPEGQAFDKAMELAARVAQNAPLTNYALMHALPRIAEQPAEQGYLTEALMAAIA CHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHH QSAPEAKDRVRAFLEGRAAKVQKS HCCCHHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure TSNTSSTDIQLDIRGAHQEIAVIRLSRVAKRNAVNDSLILALRDIFEKLPTTVRAAVIH CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEEE GEGEHFCAGLDLGELEERDAGQGMHHSRMWHAALERVQFGPVPVIAALQGAVVGGGLELA CCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH SACHIRVADETAFYALPEGSRGIFVGGGGSVRIPKLIGVARMTDMMLTGRVYNAQDGERA CEEEEEEECCCEEEECCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHCEEECCCCCCCC GFAQYLVPEGQAFDKAMELAARVAQNAPLTNYALMHALPRIAEQPAEQGYLTEALMAAIA CHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHH QSAPEAKDRVRAFLEGRAAKVQKS HCCCHHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA