| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788886
Identifier: 91788886
GI number: 91788886
Start: 3192426
End: 3193031
Strand: Direct
Name: 91788886
Synonym: Bpro_3026
Alternate gene names: NA
Gene position: 3192426-3193031 (Clockwise)
Preceding gene: 91788885
Following gene: 91788887
Centisome position: 61.39
GC content: 66.5
Gene sequence:
>606_bases GTGCGCAGGGTGAGCGACGATAATCTGGCCATGAGTTCCCCGCCCGCGGAAGTGCGCCCGCAACCCAAATCCCTCACCGA CCTGTTTGTCTCATTCACATTGCTGGCCCTGCAGGGCTTTGGCGGCGTGCTGGCCGTGGTCCAGCGCGAGCTGGTGGAAA AAAAACGCTGGATGACGCGTGAAGAATTCATCGAAGACTGGGCGGTGGCGCAAATCATGCCAGGGCCCAACGTGGTGAAC CTGTCACTGATGGTGGGCGGGCGTTACTTCGGCCTGAAGGGCGCCATGGCGGCGCTCGCGGGCATGCTGACCGTGCCGCT GGTGCTGGTGTTGCTGCTGGCGGTGCTGTATGCCCAGTTTGCGGCGCACCCGGGCGTGGCGGGTGCCCTGCGCGGCATGG CGGCAGTGGCCGCCGGCCTGATCGCGGCAACCGGCATGCGGCTGTCCGGCGCACTGGCCAAAAACGTGCTGGGACTGCGC CTGTGCGCCGTGTTCGGCGTGACAACCTTCGCCGCCATCGCCCTGCTGCGCTGGCCGCTGGCCTATGTGCTGCTCGGGCT GGGCGGGGTGGCCTGCCTGGCGGCTTTTTATAGGCTCAAGCCATGA
Upstream 100 bases:
>100_bases CCGGGCGAAATCGGCCGCTGAACGCCATGTGCTGTCGGGACGGGAACGCCTGCTGGCCAGCATCGATGACAGCAGCCCCC TGTCGTCCTAGGAGCCCACT
Downstream 100 bases:
>100_bases CCGATGCGCCCCACCTGGTTTTCGGCGCGCATGAATGGTTTGAGCTGTTTTTGCACTACCTGTCGCTCTCGCTGCTGTCG ATCGGAGGCGCCATCAGCAC
Product: chromate transporter
Products: NA
Alternate protein names: ChrA Half Sized-Like Protein; Transmembrane Protein; Multidrug Efflux Transporter Protein; Chromate Transporter Family; CHR Transporter
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRRVSDDNLAMSSPPAEVRPQPKSLTDLFVSFTLLALQGFGGVLAVVQRELVEKKRWMTREEFIEDWAVAQIMPGPNVVN LSLMVGGRYFGLKGAMAALAGMLTVPLVLVLLLAVLYAQFAAHPGVAGALRGMAAVAAGLIAATGMRLSGALAKNVLGLR LCAVFGVTTFAAIALLRWPLAYVLLGLGGVACLAAFYRLKP
Sequences:
>Translated_201_residues MRRVSDDNLAMSSPPAEVRPQPKSLTDLFVSFTLLALQGFGGVLAVVQRELVEKKRWMTREEFIEDWAVAQIMPGPNVVN LSLMVGGRYFGLKGAMAALAGMLTVPLVLVLLLAVLYAQFAAHPGVAGALRGMAAVAAGLIAATGMRLSGALAKNVLGLR LCAVFGVTTFAAIALLRWPLAYVLLGLGGVACLAAFYRLKP >Mature_201_residues MRRVSDDNLAMSSPPAEVRPQPKSLTDLFVSFTLLALQGFGGVLAVVQRELVEKKRWMTREEFIEDWAVAQIMPGPNVVN LSLMVGGRYFGLKGAMAALAGMLTVPLVLVLLLAVLYAQFAAHPGVAGALRGMAAVAAGLIAATGMRLSGALAKNVLGLR LCAVFGVTTFAAIALLRWPLAYVLLGLGGVACLAAFYRLKP
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21239; Mature: 21239
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVSDDNLAMSSPPAEVRPQPKSLTDLFVSFTLLALQGFGGVLAVVQRELVEKKRWMTR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH EEFIEDWAVAQIMPGPNVVNLSLMVGGRYFGLKGAMAALAGMLTVPLVLVLLLAVLYAQF HHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHPGVAGALRGMAAVAAGLIAATGMRLSGALAKNVLGLRLCAVFGVTTFAAIALLRWPL HCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYVLLGLGGVACLAAFYRLKP HHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MRRVSDDNLAMSSPPAEVRPQPKSLTDLFVSFTLLALQGFGGVLAVVQRELVEKKRWMTR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH EEFIEDWAVAQIMPGPNVVNLSLMVGGRYFGLKGAMAALAGMLTVPLVLVLLLAVLYAQF HHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHPGVAGALRGMAAVAAGLIAATGMRLSGALAKNVLGLRLCAVFGVTTFAAIALLRWPL HCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYVLLGLGGVACLAAFYRLKP HHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA