| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788887
Identifier: 91788887
GI number: 91788887
Start: 3193028
End: 3193624
Strand: Direct
Name: 91788887
Synonym: Bpro_3027
Alternate gene names: NA
Gene position: 3193028-3193624 (Clockwise)
Preceding gene: 91788886
Following gene: 91788891
Centisome position: 61.4
GC content: 64.49
Gene sequence:
>597_bases ATGACCGATGCGCCCCACCTGGTTTTCGGCGCGCATGAATGGTTTGAGCTGTTTTTGCACTACCTGTCGCTCTCGCTGCT GTCGATCGGAGGCGCCATCAGCACGGCGCCCGACATGCACCGCTTCCTGGTCGACAAGCAGCACTGGCTGACTGACGCGC AGTTCAACGCCTCCATTGCCATTGCACAGTCGGCCCCCGGCCCGAATGTCCTGTTCATCGCCCTGCTCGGCTGGAACGTG GGCATGAATGCGGGCGGCATGCTCACCGGCCTCCTGGGCGTGTTTCTCGCCTTGCTGGGCATTCTCATCCCCAGCACCGT GCTCACTTACACGGCGGCCCAATGGGGCCACCGGAACCGCGAATTGCGGGCAGTGCGCGCCTTCAAGCAGGGCATGGCGC CCATCGTGGTGGCGCTGCTGATTGCCACCGGCTGCATTCTGGCGGGAGCCAACGGCAAGGCAGGCAACAGCGTTGCGCAA AACTGGCCCGTGTGGCTGCTGACGGGCACCACGGCCCTGATCGTCTGGCGCACCCGAATTCACCTGCTCTGGCTGCTGGC CGCAGGCGCTGCACTCGGCTGGTTCGGGTTAATCTGA
Upstream 100 bases:
>100_bases CAACCTTCGCCGCCATCGCCCTGCTGCGCTGGCCGCTGGCCTATGTGCTGCTCGGGCTGGGCGGGGTGGCCTGCCTGGCG GCTTTTTATAGGCTCAAGCC
Downstream 100 bases:
>100_bases GCTTGCTCCGAAGCTGATCTGCCCCGGGAGGGGCACCTGGTCAGGTTAGCGGGGATTCTCGAAAAAGATGTAGTTTGAGC CGTAATCGCTGACCTCGAAA
Product: chromate transporter
Products: NA
Alternate protein names: ChrA Half Sized-Like Protein; Transmembrane Protein; Subunit Of Chromate Transporter; CHR Transporter
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTDAPHLVFGAHEWFELFLHYLSLSLLSIGGAISTAPDMHRFLVDKQHWLTDAQFNASIAIAQSAPGPNVLFIALLGWNV GMNAGGMLTGLLGVFLALLGILIPSTVLTYTAAQWGHRNRELRAVRAFKQGMAPIVVALLIATGCILAGANGKAGNSVAQ NWPVWLLTGTTALIVWRTRIHLLWLLAAGAALGWFGLI
Sequences:
>Translated_198_residues MTDAPHLVFGAHEWFELFLHYLSLSLLSIGGAISTAPDMHRFLVDKQHWLTDAQFNASIAIAQSAPGPNVLFIALLGWNV GMNAGGMLTGLLGVFLALLGILIPSTVLTYTAAQWGHRNRELRAVRAFKQGMAPIVVALLIATGCILAGANGKAGNSVAQ NWPVWLLTGTTALIVWRTRIHLLWLLAAGAALGWFGLI >Mature_197_residues TDAPHLVFGAHEWFELFLHYLSLSLLSIGGAISTAPDMHRFLVDKQHWLTDAQFNASIAIAQSAPGPNVLFIALLGWNVG MNAGGMLTGLLGVFLALLGILIPSTVLTYTAAQWGHRNRELRAVRAFKQGMAPIVVALLIATGCILAGANGKAGNSVAQN WPVWLLTGTTALIVWRTRIHLLWLLAAGAALGWFGLI
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21244; Mature: 21113
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPHLVFGAHEWFELFLHYLSLSLLSIGGAISTAPDMHRFLVDKQHWLTDAQFNASIA CCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE IAQSAPGPNVLFIALLGWNVGMNAGGMLTGLLGVFLALLGILIPSTVLTYTAAQWGHRNR EEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ELRAVRAFKQGMAPIVVALLIATGCILAGANGKAGNSVAQNWPVWLLTGTTALIVWRTRI HHHHHHHHHHCHHHHHHHHHHHHHHHEECCCCCCCCCHHCCCCEEEEECCEEEEHHHHHH HLLWLLAAGAALGWFGLI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDAPHLVFGAHEWFELFLHYLSLSLLSIGGAISTAPDMHRFLVDKQHWLTDAQFNASIA CCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE IAQSAPGPNVLFIALLGWNVGMNAGGMLTGLLGVFLALLGILIPSTVLTYTAAQWGHRNR EEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ELRAVRAFKQGMAPIVVALLIATGCILAGANGKAGNSVAQNWPVWLLTGTTALIVWRTRI HHHHHHHHHHCHHHHHHHHHHHHHHHEECCCCCCCCCHHCCCCEEEEECCEEEEHHHHHH HLLWLLAAGAALGWFGLI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA