| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ubiE [H]
Identifier: 91788720
GI number: 91788720
Start: 3014223
End: 3015086
Strand: Direct
Name: ubiE [H]
Synonym: Bpro_2859
Alternate gene names: 91788720
Gene position: 3014223-3015086 (Clockwise)
Preceding gene: 91788719
Following gene: 91788727
Centisome position: 57.96
GC content: 61.57
Gene sequence:
>864_bases ATGAGCACACTGAACCCGGAACAGTTCAAGACAGCTACCAGGCAAGCTTGGGACAAGTCTGCCAGCGGGTGGAACGATCA AACACAGCATATCCATGACTGGCTCGCCGAGGCAACCCCGGCCATGCTCGATGCGGCCCGCATCACAGTCGGTATGCGGG TACTGGACATCGCCGCAGGCGCAGGGGACCAGACGCTGGACATCGCCCGGCGGGTTGGGCCCGGTGGTTATGTGCTGGCC ACCGACATTTCCGCAGGAATTTTGGAATTCGCAAAAAACAATGCGCGCCATGCCGGCTTGCTGAACGTGGAGACCAGCGT CTGCGATGCCGAAAATCTGGATGTCGATGCTGCGAGCTTCGATGCTGCCGTGTCCCGGCTCGGCCTCATGTTCTGCCCAA ACCCCTTGCTGGCGCTGCAGCAGGCTCACCGCGCCCTGAAACCCGGCGGGAGTGCATCGGTACTGGTGTTCTCGGAGCCG CAATACAACCCCTGCATCGGCATCCTGATGTCAACGGCACTCAAGCATGCAGGCCTGCCGCCGCGCGATCCCTACCAACC AGGAAGCTTGATGAGCCTGGGCAAGCCGGGCCTGCTTGATGAGTTGTTCCTCGCTGCGGGATTTACAGACGTGGCAACCA CCCGGGTCTCCGCGCCCTTCCGCCTGCCCTCGACGCGGGATTATTTGACTTTCATCCGCACTTCGGCGTCACCGATCGTG CAGATTCTGGGCAACCTGAACCAGGAAGCGCAGGACGCCGCTTGGGCGGAGATGGAAAGCAGGCTTGGTGCATTTCAGTC ACCAGGCGGCTGGGAAGGGCCAAATGAGCTGCTGGTGGCCCGTGGAACCCGGCTGTCCAGTTGA
Upstream 100 bases:
>100_bases GCGCATTGGAGCTGCGCATTGAGGTGTCAGAGGGATCGCTTGCGTTTGCACCTGTTTGGAATCAAACTGCCTACGGTGCG ATTTTCCCAAGGGATACTTC
Downstream 100 bases:
>100_bases TCTGTCGGCCAGCTCGGGATAGACGTAAAAAAGCCGCCCGAAGGCGGCTTTTTGTACTGGCGGAAACGGAGGGATTCGAA CCCTCGATGAGGCTCTACAC
Product: UbiE/COQ5 methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSTLNPEQFKTATRQAWDKSASGWNDQTQHIHDWLAEATPAMLDAARITVGMRVLDIAAGAGDQTLDIARRVGPGGYVLA TDISAGILEFAKNNARHAGLLNVETSVCDAENLDVDAASFDAAVSRLGLMFCPNPLLALQQAHRALKPGGSASVLVFSEP QYNPCIGILMSTALKHAGLPPRDPYQPGSLMSLGKPGLLDELFLAAGFTDVATTRVSAPFRLPSTRDYLTFIRTSASPIV QILGNLNQEAQDAAWAEMESRLGAFQSPGGWEGPNELLVARGTRLSS
Sequences:
>Translated_287_residues MSTLNPEQFKTATRQAWDKSASGWNDQTQHIHDWLAEATPAMLDAARITVGMRVLDIAAGAGDQTLDIARRVGPGGYVLA TDISAGILEFAKNNARHAGLLNVETSVCDAENLDVDAASFDAAVSRLGLMFCPNPLLALQQAHRALKPGGSASVLVFSEP QYNPCIGILMSTALKHAGLPPRDPYQPGSLMSLGKPGLLDELFLAAGFTDVATTRVSAPFRLPSTRDYLTFIRTSASPIV QILGNLNQEAQDAAWAEMESRLGAFQSPGGWEGPNELLVARGTRLSS >Mature_286_residues STLNPEQFKTATRQAWDKSASGWNDQTQHIHDWLAEATPAMLDAARITVGMRVLDIAAGAGDQTLDIARRVGPGGYVLAT DISAGILEFAKNNARHAGLLNVETSVCDAENLDVDAASFDAAVSRLGLMFCPNPLLALQQAHRALKPGGSASVLVFSEPQ YNPCIGILMSTALKHAGLPPRDPYQPGSLMSLGKPGLLDELFLAAGFTDVATTRVSAPFRLPSTRDYLTFIRTSASPIVQ ILGNLNQEAQDAAWAEMESRLGAFQSPGGWEGPNELLVARGTRLSS
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Escherichia coli, GI48994983, Length=123, Percent_Identity=35.7723577235772, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 30599; Mature: 30468
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLNPEQFKTATRQAWDKSASGWNDQTQHIHDWLAEATPAMLDAARITVGMRVLDIAAG CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCC AGDQTLDIARRVGPGGYVLATDISAGILEFAKNNARHAGLLNVETSVCDAENLDVDAASF CCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCCCHHHH DAAVSRLGLMFCPNPLLALQQAHRALKPGGSASVLVFSEPQYNPCIGILMSTALKHAGLP HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC PRDPYQPGSLMSLGKPGLLDELFLAAGFTDVATTRVSAPFRLPSTRDYLTFIRTSASPIV CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHH QILGNLNQEAQDAAWAEMESRLGAFQSPGGWEGPNELLVARGTRLSS HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure STLNPEQFKTATRQAWDKSASGWNDQTQHIHDWLAEATPAMLDAARITVGMRVLDIAAG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCC AGDQTLDIARRVGPGGYVLATDISAGILEFAKNNARHAGLLNVETSVCDAENLDVDAASF CCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCCCHHHH DAAVSRLGLMFCPNPLLALQQAHRALKPGGSASVLVFSEPQYNPCIGILMSTALKHAGLP HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC PRDPYQPGSLMSLGKPGLLDELFLAAGFTDVATTRVSAPFRLPSTRDYLTFIRTSASPIV CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHH QILGNLNQEAQDAAWAEMESRLGAFQSPGGWEGPNELLVARGTRLSS HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA