| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788727
Identifier: 91788727
GI number: 91788727
Start: 3021970
End: 3022617
Strand: Direct
Name: 91788727
Synonym: Bpro_2866
Alternate gene names: NA
Gene position: 3021970-3022617 (Clockwise)
Preceding gene: 91788720
Following gene: 91788728
Centisome position: 58.11
GC content: 62.19
Gene sequence:
>648_bases ATGCCCACGCGCGCACCATCGTTCTCAAGCAACTCAAGTAACTCACGCAAGCCCTTGCCGGCGGCACTGCGCGTGCTGTT GCTGGCCGCCATGCTGTCGGTATCCGCAGCTCATGCCGACGACTACGCCGATGTCAGCCGCCTGATGCGTGCCGGCCAAT ACCCCGAAGCGCTTGCCAAGGCCGACCAGTACATCGCCAGCAAGCCACGCGACCCGCAGATGCGTTTCTTCAAGGGTGTG ATCCAGACTGAAACCGGCAAGACCAGCGACGCGATCGCCACCTTCACCAAAATCACGGAAGAATATCCTGAGCTGCCTGA GCCTTACAACAACCTGGCCGTGATCTACGCCGGCCAGAACCAGTTTGACAAGGCCAGGGCCGCGCTTGAAATGGCGATCC GCACCAACCCCAGCTATGCCACCGCCCACGAAAACCTGGGCGACGTCTACGCCAAGCTCGCCAGCCAGGCCTACGACAAA GCCCTGCAGCTTGACCGTGGCAACACCAGCGTGCCGCCCAAGTTGGCGCTGATCCGCGAATTGTTCTCAGCCGGCACCAA AAACCAGAAGTCGGCCGCCACCGGCGTGCAGATATCCGGCCCGATGGTTGTCAAGCCAGCCCCTGCACCCGTGGCATCGC CCCGATAG
Upstream 100 bases:
>100_bases GCATGCGGCAATTCCGGGGGCCACTGAAGAGCCAGGCTGTTTCATGGTGATTTCCCGCCCAACGGGTATCCAACGCTTCA AAACAATAGCGAGACTTCTC
Downstream 100 bases:
>100_bases TGCCGTCCTACCAAGTGCACCAGCCGCTGCAGACGATCGGCGCTGGACCGACAGCAGCGACACGATGGTGGTAACCTTTA GCAAACTGGTCAGGGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPTRAPSFSSNSSNSRKPLPAALRVLLLAAMLSVSAAHADDYADVSRLMRAGQYPEALAKADQYIASKPRDPQMRFFKGV IQTETGKTSDAIATFTKITEEYPELPEPYNNLAVIYAGQNQFDKARAALEMAIRTNPSYATAHENLGDVYAKLASQAYDK ALQLDRGNTSVPPKLALIRELFSAGTKNQKSAATGVQISGPMVVKPAPAPVASPR
Sequences:
>Translated_215_residues MPTRAPSFSSNSSNSRKPLPAALRVLLLAAMLSVSAAHADDYADVSRLMRAGQYPEALAKADQYIASKPRDPQMRFFKGV IQTETGKTSDAIATFTKITEEYPELPEPYNNLAVIYAGQNQFDKARAALEMAIRTNPSYATAHENLGDVYAKLASQAYDK ALQLDRGNTSVPPKLALIRELFSAGTKNQKSAATGVQISGPMVVKPAPAPVASPR >Mature_214_residues PTRAPSFSSNSSNSRKPLPAALRVLLLAAMLSVSAAHADDYADVSRLMRAGQYPEALAKADQYIASKPRDPQMRFFKGVI QTETGKTSDAIATFTKITEEYPELPEPYNNLAVIYAGQNQFDKARAALEMAIRTNPSYATAHENLGDVYAKLASQAYDKA LQLDRGNTSVPPKLALIRELFSAGTKNQKSAATGVQISGPMVVKPAPAPVASPR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23156; Mature: 23024
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRAPSFSSNSSNSRKPLPAALRVLLLAAMLSVSAAHADDYADVSRLMRAGQYPEALAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH ADQYIASKPRDPQMRFFKGVIQTETGKTSDAIATFTKITEEYPELPEPYNNLAVIYAGQN HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC QFDKARAALEMAIRTNPSYATAHENLGDVYAKLASQAYDKALQLDRGNTSVPPKLALIRE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LFSAGTKNQKSAATGVQISGPMVVKPAPAPVASPR HHHCCCCCCCHHHCCEEECCCEEECCCCCCCCCCC >Mature Secondary Structure PTRAPSFSSNSSNSRKPLPAALRVLLLAAMLSVSAAHADDYADVSRLMRAGQYPEALAK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH ADQYIASKPRDPQMRFFKGVIQTETGKTSDAIATFTKITEEYPELPEPYNNLAVIYAGQN HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC QFDKARAALEMAIRTNPSYATAHENLGDVYAKLASQAYDKALQLDRGNTSVPPKLALIRE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LFSAGTKNQKSAATGVQISGPMVVKPAPAPVASPR HHHCCCCCCCHHHCCEEECCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA