| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788693
Identifier: 91788693
GI number: 91788693
Start: 2984669
End: 2986432
Strand: Direct
Name: 91788693
Synonym: Bpro_2832
Alternate gene names: NA
Gene position: 2984669-2986432 (Clockwise)
Preceding gene: 91788692
Following gene: 91788695
Centisome position: 57.39
GC content: 62.7
Gene sequence:
>1764_bases ATGCGACGTTTCATAGGGGGCATAACGGATGCTCCGGCAGACCTGCGCACTTACACTGATGCGATGCTGATTTCACCCAC AACCAGCCCCACTTTCGGGGACACAACCGCCGAATCCAGCACACCAGCCGTGAAGCAGTTTCGCCAATCCCTGCTTTGGC CGTTGCGTCTTATAGCGGCGGCAGACGCTGAGCGCCTACACCACGGCCCCTGGGAGGTTCTTCGGGAGCTGGGTGATGCC ACACCCTGGCGCGAAGAGTTTGACGAGTACACCGGCGACCGGGAAGATTTTCATGAGCGCCACTACAGCGAGTTTGTGAG CTTTTTGCCCTATGTGCAGCGCTTTCTGTATGGCGAAGGACGCTCGCAAAACCAGGGCAGCAAAGCGCCCGGCAGCGATG GCGATTCACCCATGCGGGTCTTCCGGCGCCGCGACATCGCCGCGGTACGCGTGGTGGCGCAGCCCGGTGATGCGCCAGTC ACGCTCGCCGTGGAGCATTGCAACCTCCATTTTTTCTTTGATATCGACGTGGTGCTGCTCAACCTTGAGATTTGCGCCAA CGACCTGAGCCTGGCGCAGGCCCAGGATCTGCTTTACCGCTTTGGCCGCGCCTACCCCGCTGGCTGGGATGCCGAAGGTG CCGCGCAGCACTGCATGGCCAGCGTGGAGTGGCTGGCCGCCGACGGCACCGTGCTTGCCAGCTCCGACGCGCAGCAACGC GAAACATTTCTGTCGCATGTCGCCCAGCACCGGGCGCCGCGCATTGCCGCCCACTGGGCCTATCTGATGCAGCCCTTGGT GAGCGACCATTCGGAGGAGCCCGGCGCCCTGCGCTACCGCCAGATTGAGTACTACCGGATGCCGCTGATGGCCTACCTGT CGCTCGACGACCCGCGCCGTCTCACGCGTACCGACTTCGTCCGGCTCGGGCTGGTCACTGGCGCGGGCGCGACCGACGGA AATCTGCCTTACGCCGCACAACACCTGGCTGATTTTGAGCAGCGCTACTGCTACGACCGCTTCTGGGGCGATACCGGCGC GGCGCCCAACACACGCTACCTGTGCAACGGCCACGCCCTGATTGTGGTGGGCGACGCACGCTCAGCCTTTTTTTGCTGCG GCGACCGCGGCGTGCTGGCGCAGTTTCGGCACCAGCACTTCCTGCTGTTCCTGATTGCGCACTTTCAAAAAGCCGCCTTG CTGATGTTTTCAGACCAGTTGGTCGAGGCGCTCAAGCAGCTGGACATCCACCACACGCCCAGCGTCAAGGACTTCAAGCG CGCCATTCGCGCCAGTTTTGAGCGCTTTCTGCGCTTCACCCACCGCTACTGGTTTCACGAGATTTCAGAGCAAGCCCAGG TACGCGCACTGTCACACCTGTGCACCACCCACCTGGGGCTCGACCCGCTCTACAACGAGGTCAAGGAGCGCATTGCCGAC ATGAACACCTACCTGGACGCCGACAGCCTGCGTCGCCAGGCCAGCACGGTGGTGCGGCTGACCGTGGTCACGTTGTTCGG TTTGATAGGCACCGTCACGACCGGCTTTCTGGGTATGAACCTGCTGGCCGAAGCGGACGCGCCGCTGTGGCGCAAGGCAA TCTGGTTTTGCGTGGTGTTTGTCGCCACCACCACGCTTACGCTGTACACCATGGTCAAGTCAAAACAGCTGTCCGACTTT ATCGACGCACTGTCGAACGACCGCCTCAGCGTGCGCGGCAAGCTCGCTACGCTGGCGCGGGTGTGGCGGTCGGGGGCGGA TTGA
Upstream 100 bases:
>100_bases GAGGACCTGATCGAAGACGTGGACCGGGCGATCGAAACATCGCGCTAAGGGCGGTGTTGCGGCATGATCCAGTCGCCGGG CGGCGGCTGGCCGGGTTTCG
Downstream 100 bases:
>100_bases ATTTCAGGTAGCTACACCCCATCGGCAAGGCCAGACGGCGCCCGCTGGTGCAGCGCCCCGAGGAAAAACCGCGCCGCCTC GCTGAGCGGCCTGTCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MRRFIGGITDAPADLRTYTDAMLISPTTSPTFGDTTAESSTPAVKQFRQSLLWPLRLIAAADAERLHHGPWEVLRELGDA TPWREEFDEYTGDREDFHERHYSEFVSFLPYVQRFLYGEGRSQNQGSKAPGSDGDSPMRVFRRRDIAAVRVVAQPGDAPV TLAVEHCNLHFFFDIDVVLLNLEICANDLSLAQAQDLLYRFGRAYPAGWDAEGAAQHCMASVEWLAADGTVLASSDAQQR ETFLSHVAQHRAPRIAAHWAYLMQPLVSDHSEEPGALRYRQIEYYRMPLMAYLSLDDPRRLTRTDFVRLGLVTGAGATDG NLPYAAQHLADFEQRYCYDRFWGDTGAAPNTRYLCNGHALIVVGDARSAFFCCGDRGVLAQFRHQHFLLFLIAHFQKAAL LMFSDQLVEALKQLDIHHTPSVKDFKRAIRASFERFLRFTHRYWFHEISEQAQVRALSHLCTTHLGLDPLYNEVKERIAD MNTYLDADSLRRQASTVVRLTVVTLFGLIGTVTTGFLGMNLLAEADAPLWRKAIWFCVVFVATTTLTLYTMVKSKQLSDF IDALSNDRLSVRGKLATLARVWRSGAD
Sequences:
>Translated_587_residues MRRFIGGITDAPADLRTYTDAMLISPTTSPTFGDTTAESSTPAVKQFRQSLLWPLRLIAAADAERLHHGPWEVLRELGDA TPWREEFDEYTGDREDFHERHYSEFVSFLPYVQRFLYGEGRSQNQGSKAPGSDGDSPMRVFRRRDIAAVRVVAQPGDAPV TLAVEHCNLHFFFDIDVVLLNLEICANDLSLAQAQDLLYRFGRAYPAGWDAEGAAQHCMASVEWLAADGTVLASSDAQQR ETFLSHVAQHRAPRIAAHWAYLMQPLVSDHSEEPGALRYRQIEYYRMPLMAYLSLDDPRRLTRTDFVRLGLVTGAGATDG NLPYAAQHLADFEQRYCYDRFWGDTGAAPNTRYLCNGHALIVVGDARSAFFCCGDRGVLAQFRHQHFLLFLIAHFQKAAL LMFSDQLVEALKQLDIHHTPSVKDFKRAIRASFERFLRFTHRYWFHEISEQAQVRALSHLCTTHLGLDPLYNEVKERIAD MNTYLDADSLRRQASTVVRLTVVTLFGLIGTVTTGFLGMNLLAEADAPLWRKAIWFCVVFVATTTLTLYTMVKSKQLSDF IDALSNDRLSVRGKLATLARVWRSGAD >Mature_587_residues MRRFIGGITDAPADLRTYTDAMLISPTTSPTFGDTTAESSTPAVKQFRQSLLWPLRLIAAADAERLHHGPWEVLRELGDA TPWREEFDEYTGDREDFHERHYSEFVSFLPYVQRFLYGEGRSQNQGSKAPGSDGDSPMRVFRRRDIAAVRVVAQPGDAPV TLAVEHCNLHFFFDIDVVLLNLEICANDLSLAQAQDLLYRFGRAYPAGWDAEGAAQHCMASVEWLAADGTVLASSDAQQR ETFLSHVAQHRAPRIAAHWAYLMQPLVSDHSEEPGALRYRQIEYYRMPLMAYLSLDDPRRLTRTDFVRLGLVTGAGATDG NLPYAAQHLADFEQRYCYDRFWGDTGAAPNTRYLCNGHALIVVGDARSAFFCCGDRGVLAQFRHQHFLLFLIAHFQKAAL LMFSDQLVEALKQLDIHHTPSVKDFKRAIRASFERFLRFTHRYWFHEISEQAQVRALSHLCTTHLGLDPLYNEVKERIAD MNTYLDADSLRRQASTVVRLTVVTLFGLIGTVTTGFLGMNLLAEADAPLWRKAIWFCVVFVATTTLTLYTMVKSKQLSDF IDALSNDRLSVRGKLATLARVWRSGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66371; Mature: 66371
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFIGGITDAPADLRTYTDAMLISPTTSPTFGDTTAESSTPAVKQFRQSLLWPLRLIAA CCCHHCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ADAERLHHGPWEVLRELGDATPWREEFDEYTGDREDFHERHYSEFVSFLPYVQRFLYGEG HCHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RSQNQGSKAPGSDGDSPMRVFRRRDIAAVRVVAQPGDAPVTLAVEHCNLHFFFDIDVVLL CCCCCCCCCCCCCCCHHHHHHHHCCHHEEEEEECCCCCCEEEEEEECCEEEEEEEEEEEE NLEICANDLSLAQAQDLLYRFGRAYPAGWDAEGAAQHCMASVEWLAADGTVLASSDAQQR EHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHH ETFLSHVAQHRAPRIAAHWAYLMQPLVSDHSEEPGALRYRQIEYYRMPLMAYLSLDDPRR HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHEECCCCCHH LTRTDFVRLGLVTGAGATDGNLPYAAQHLADFEQRYCYDRFWGDTGAAPNTRYLCNGHAL HHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEE IVVGDARSAFFCCGDRGVLAQFRHQHFLLFLIAHFQKAALLMFSDQLVEALKQLDIHHTP EEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SVKDFKRAIRASFERFLRFTHRYWFHEISEQAQVRALSHLCTTHLGLDPLYNEVKERIAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MNTYLDADSLRRQASTVVRLTVVTLFGLIGTVTTGFLGMNLLAEADAPLWRKAIWFCVVF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VATTTLTLYTMVKSKQLSDFIDALSNDRLSVRGKLATLARVWRSGAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRFIGGITDAPADLRTYTDAMLISPTTSPTFGDTTAESSTPAVKQFRQSLLWPLRLIAA CCCHHCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ADAERLHHGPWEVLRELGDATPWREEFDEYTGDREDFHERHYSEFVSFLPYVQRFLYGEG HCHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RSQNQGSKAPGSDGDSPMRVFRRRDIAAVRVVAQPGDAPVTLAVEHCNLHFFFDIDVVLL CCCCCCCCCCCCCCCHHHHHHHHCCHHEEEEEECCCCCCEEEEEEECCEEEEEEEEEEEE NLEICANDLSLAQAQDLLYRFGRAYPAGWDAEGAAQHCMASVEWLAADGTVLASSDAQQR EHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHH ETFLSHVAQHRAPRIAAHWAYLMQPLVSDHSEEPGALRYRQIEYYRMPLMAYLSLDDPRR HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHEECCCCCHH LTRTDFVRLGLVTGAGATDGNLPYAAQHLADFEQRYCYDRFWGDTGAAPNTRYLCNGHAL HHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEE IVVGDARSAFFCCGDRGVLAQFRHQHFLLFLIAHFQKAALLMFSDQLVEALKQLDIHHTP EEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SVKDFKRAIRASFERFLRFTHRYWFHEISEQAQVRALSHLCTTHLGLDPLYNEVKERIAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MNTYLDADSLRRQASTVVRLTVVTLFGLIGTVTTGFLGMNLLAEADAPLWRKAIWFCVVF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VATTTLTLYTMVKSKQLSDFIDALSNDRLSVRGKLATLARVWRSGAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA